RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 FAM83GA6ND36 823 aa18.88■□□□□ 0.61
MSRA-201ENST00000317173 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
MSRA-201ENST00000317173 CFAP53Q96M91 514 aa18.88■□□□□ 0.61
MSRA-201ENST00000317173 MTHFSP49914 203 aa18.87■□□□□ 0.61
MSRA-201ENST00000317173 ZRANB1Q9UGI0 708 aa18.87■□□□□ 0.61
MSRA-201ENST00000317173 USP19O94966 1318 aa18.87■□□□□ 0.61
MSRA-201ENST00000317173 NLRP6P59044 892 aa18.86■□□□□ 0.61
MSRA-201ENST00000317173 VPS72Q15906 364 aa18.86■□□□□ 0.61
MSRA-201ENST00000317173 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
MSRA-201ENST00000317173 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
MSRA-201ENST00000317173 KIAA0232Q92628 1395 aa18.84■□□□□ 0.61
MSRA-201ENST00000317173 SLIT3O75094 1523 aa18.84■□□□□ 0.61
MSRA-201ENST00000317173 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
MSRA-201ENST00000317173 BTG4Q9NY30 223 aa18.84■□□□□ 0.61
MSRA-201ENST00000317173 NRAPQ86VF7 1730 aa18.83■□□□□ 0.6
MSRA-201ENST00000317173 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
MSRA-201ENST00000317173 COL3A1P02461 1466 aaPredicted RBP18.83■□□□□ 0.6
MSRA-201ENST00000317173 CPDO75976 1380 aa18.82■□□□□ 0.6
MSRA-201ENST00000317173 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
MSRA-201ENST00000317173 GLI3P10071 1580 aa18.82■□□□□ 0.6
MSRA-201ENST00000317173 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
MSRA-201ENST00000317173 WDR43Q15061 677 aaKnown RBP eCLIP18.81■□□□□ 0.6
MSRA-201ENST00000317173 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
MSRA-201ENST00000317173 ZC3H6P61129 1189 aaKnown RBP18.8■□□□□ 0.6
MSRA-201ENST00000317173 LTN1O94822 1766 aa18.8■□□□□ 0.6
MSRA-201ENST00000317173 NFAT5O94916 1531 aa18.8■□□□□ 0.6
MSRA-201ENST00000317173 GCP02774 474 aa18.79■□□□□ 0.6
MSRA-201ENST00000317173 YTHDC1Q96MU7 727 aaKnown RBP18.79■□□□□ 0.6
MSRA-201ENST00000317173 UPF1Q92900 1129 aaKnown RBP eCLIP18.78■□□□□ 0.6
MSRA-201ENST00000317173 BLMP54132 1417 aaPredicted RBP18.78■□□□□ 0.6
MSRA-201ENST00000317173 PEAK1Q9H792 1746 aa18.77■□□□□ 0.6
MSRA-201ENST00000317173 CHRNA2Q15822 529 aa18.77■□□□□ 0.6
MSRA-201ENST00000317173 NUDCQ9Y266 331 aa18.77■□□□□ 0.6
MSRA-201ENST00000317173 EMILIN1Q9Y6C2 1016 aa18.77■□□□□ 0.6
MSRA-201ENST00000317173 RTL1A6NKG5 1358 aa18.76■□□□□ 0.59
MSRA-201ENST00000317173 ONECUT3O60422 494 aaPredicted RBP18.76■□□□□ 0.59
MSRA-201ENST00000317173 FLT4P35916 1363 aa18.76■□□□□ 0.59
MSRA-201ENST00000317173 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
MSRA-201ENST00000317173 MAP3K19Q56UN5 1328 aa18.75■□□□□ 0.59
MSRA-201ENST00000317173 DIAPH1O60610 1272 aaKnown RBP18.75■□□□□ 0.59
MSRA-201ENST00000317173 SPATA31A5Q5VU36 1347 aa18.75■□□□□ 0.59
MSRA-201ENST00000317173 SPATA31A7Q8IWB4 1347 aa18.75■□□□□ 0.59
MSRA-201ENST00000317173 FBLN1P23142 703 aa18.74■□□□□ 0.59
MSRA-201ENST00000317173 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
MSRA-201ENST00000317173 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
MSRA-201ENST00000317173 ADAMTS8Q9UP79 889 aa18.74■□□□□ 0.59
MSRA-201ENST00000317173 LMO7Q8WWI1 1683 aa18.74■□□□□ 0.59
MSRA-201ENST00000317173 EVA1CP58658 441 aa18.72■□□□□ 0.59
MSRA-201ENST00000317173 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.59
MSRA-201ENST00000317173 STRN4Q9NRL3 753 aa18.72■□□□□ 0.59
MSRA-201ENST00000317173 ABCC6O95255 1503 aa18.72■□□□□ 0.59
MSRA-201ENST00000317173 CAMTA1Q9Y6Y1 1673 aa18.72■□□□□ 0.59
MSRA-201ENST00000317173 SOX12O15370 315 aa18.71■□□□□ 0.59
MSRA-201ENST00000317173 AMPHP49418 695 aa18.71■□□□□ 0.59
MSRA-201ENST00000317173 SPATA31A1Q5TZJ5 1347 aa18.71■□□□□ 0.58
MSRA-201ENST00000317173 FAM98CQ17RN3 349 aaKnown RBP18.7■□□□□ 0.58
MSRA-201ENST00000317173 A0A0G2JS52 829 aa18.69■□□□□ 0.58
MSRA-201ENST00000317173 IL13P35225 146 aa18.69■□□□□ 0.58
MSRA-201ENST00000317173 MYT1Q01538 1121 aa18.69■□□□□ 0.58
MSRA-201ENST00000317173 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
MSRA-201ENST00000317173 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
MSRA-201ENST00000317173 ARHGEF25Q86VW2 580 aa18.69■□□□□ 0.58
MSRA-201ENST00000317173 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
MSRA-201ENST00000317173 COL5A2P05997 1499 aaPredicted RBP18.68■□□□□ 0.58
MSRA-201ENST00000317173 ZBTB7CA1YPR0 619 aa18.68■□□□□ 0.58
MSRA-201ENST00000317173 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
MSRA-201ENST00000317173 HOXC9P31274 260 aa18.68■□□□□ 0.58
MSRA-201ENST00000317173 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
MSRA-201ENST00000317173 ZBED9Q6R2W3 1325 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 CCDC125Q86Z20 511 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 IP6K1Q92551 441 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 THSD7AQ9UPZ6 1657 aa18.67■□□□□ 0.58
MSRA-201ENST00000317173 U2SURPO15042 1029 aaKnown RBP18.66■□□□□ 0.58
MSRA-201ENST00000317173 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
MSRA-201ENST00000317173 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
MSRA-201ENST00000317173 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
MSRA-201ENST00000317173 LARP1Q6PKG0 1096 aaKnown RBP18.65■□□□□ 0.58
MSRA-201ENST00000317173 BARGINQ6ZT62 677 aa18.65■□□□□ 0.58
MSRA-201ENST00000317173 COL18A1P39060 1754 aa18.65■□□□□ 0.58
MSRA-201ENST00000317173 FCHSD2O94868 740 aa18.64■□□□□ 0.58
MSRA-201ENST00000317173 RUNDC1Q96C34 613 aa18.64■□□□□ 0.58
MSRA-201ENST00000317173 THRAP3Q9Y2W1 955 aaKnown RBP18.64■□□□□ 0.58
MSRA-201ENST00000317173 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
MSRA-201ENST00000317173 CRB1P82279 1406 aa18.63■□□□□ 0.57
MSRA-201ENST00000317173 EP400Q96L91 3159 aa18.63■□□□□ 0.57
MSRA-201ENST00000317173 USP35Q9P2H5 1018 aa18.63■□□□□ 0.57
MSRA-201ENST00000317173 FAM208AQ9UK61 1670 aaKnown RBP18.62■□□□□ 0.57
MSRA-201ENST00000317173 NCBP3Q53F19 620 aaKnown RBP18.62■□□□□ 0.57
MSRA-201ENST00000317173 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
MSRA-201ENST00000317173 WDR17Q8IZU2 1322 aa18.61■□□□□ 0.57
MSRA-201ENST00000317173 AXIN2Q9Y2T1 843 aa18.6■□□□□ 0.57
MSRA-201ENST00000317173 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 KDRP35968 1356 aa18.59■□□□□ 0.57
MSRA-201ENST00000317173 NEFMP07197 916 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms