RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 DNAAF4Q8WXU2 420 aa14.65□□□□□ -0.07
EBF1-201ENST00000313708 WDR63Q8IWG1 891 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 CCDC102AQ96A19 550 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 KIF2AO00139 706 aaPredicted RBP14.64□□□□□ -0.07
EBF1-201ENST00000313708 FAM193AP78312 1265 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 CHMP4CQ96CF2 233 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 ELF2Q15723 593 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 CT47A1Q5JQC4 288 aaPredicted RBP14.64□□□□□ -0.07
EBF1-201ENST00000313708 GPT2Q8TD30 523 aa14.64□□□□□ -0.07
EBF1-201ENST00000313708 SLU7O95391 586 aaKnown RBP14.63□□□□□ -0.07
EBF1-201ENST00000313708 CCDC91Q7Z6B0 441 aa14.63□□□□□ -0.07
EBF1-201ENST00000313708 ZMYM4Q5VZL5 1548 aa14.63□□□□□ -0.07
EBF1-201ENST00000313708 EIF3JO75822 258 aaKnown RBP14.63□□□□□ -0.07
EBF1-201ENST00000313708 FKBP5Q13451 457 aaPredicted RBP14.63□□□□□ -0.07
EBF1-201ENST00000313708 CKAP2LQ8IYA6 745 aa14.63□□□□□ -0.07
EBF1-201ENST00000313708 NEK11Q8NG66 645 aa14.63□□□□□ -0.07
EBF1-201ENST00000313708 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
EBF1-201ENST00000313708 IBTKQ9P2D0 1353 aaPredicted RBP14.62□□□□□ -0.07
EBF1-201ENST00000313708 TERF2Q15554 542 aa14.62□□□□□ -0.07
EBF1-201ENST00000313708 URI1O94763 535 aaPredicted RBP14.62□□□□□ -0.07
EBF1-201ENST00000313708 ZNF526Q8TF50 670 aaPredicted RBP14.62□□□□□ -0.07
EBF1-201ENST00000313708 CCDC34Q96HJ3 373 aa14.62□□□□□ -0.07
EBF1-201ENST00000313708 FMNL2Q96PY5 1086 aa14.62□□□□□ -0.07
EBF1-201ENST00000313708 CCP110O43303 1012 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 TRIM27P14373 513 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 MX1P20591 662 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 NUCB1Q02818 461 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 HDAC1Q13547 482 aaPredicted RBP14.61□□□□□ -0.07
EBF1-201ENST00000313708 SF3A1Q15459 793 aaKnown RBP14.61□□□□□ -0.07
EBF1-201ENST00000313708 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 CCDC171Q6TFL3 1326 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 EFCC1Q9HA90 598 aa14.61□□□□□ -0.07
EBF1-201ENST00000313708 TPM1P09493 284 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 SNW1Q13573 536 aaKnown RBP14.6□□□□□ -0.07
EBF1-201ENST00000313708 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
EBF1-201ENST00000313708 PKP1Q13835 747 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 CHAMP1Q96JM3 812 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 NAT10Q9H0A0 1025 aaKnown RBP14.6□□□□□ -0.07
EBF1-201ENST00000313708 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 IVLP07476 585 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 CCDC73Q6ZRK6 1079 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 PDS5BQ9NTI5 1447 aa14.6□□□□□ -0.07
EBF1-201ENST00000313708 CNPY2Q9Y2B0 182 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 HNRNPH2P55795 449 aaKnown RBP14.59□□□□□ -0.07
EBF1-201ENST00000313708 TMX3Q96JJ7 454 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 PDLIM2Q96JY6 352 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 ARHGAP29Q52LW3 1261 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 UBE2HP62256 183 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 SSH1Q8WYL5 1049 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 API5Q9BZZ5 524 aaKnown RBP14.59□□□□□ -0.07
EBF1-201ENST00000313708 CENPHQ9H3R5 247 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 PYCARDQ9ULZ3 195 aa14.59□□□□□ -0.07
EBF1-201ENST00000313708 LOC102724159A0A0B4J2E5 919 aa14.58□□□□□ -0.07
EBF1-201ENST00000313708 KRT85P78386 507 aa14.58□□□□□ -0.07
EBF1-201ENST00000313708 PWP2Q15269 919 aaKnown RBP14.58□□□□□ -0.07
EBF1-201ENST00000313708 PDILTQ8N807 584 aa14.58□□□□□ -0.07
EBF1-201ENST00000313708 CAPN2P17655 700 aa14.58□□□□□ -0.08
EBF1-201ENST00000313708 SAFB2Q14151 953 aaKnown RBP eCLIP14.58□□□□□ -0.08
EBF1-201ENST00000313708 CREBRFQ8IUR6 639 aa14.58□□□□□ -0.08
EBF1-201ENST00000313708 ERCC4Q92889 916 aaPredicted RBP14.58□□□□□ -0.08
EBF1-201ENST00000313708 MICALL1Q8N3F8 863 aa14.58□□□□□ -0.08
EBF1-201ENST00000313708 ERO1AQ96HE7 468 aa14.58□□□□□ -0.08
EBF1-201ENST00000313708 FOSBP53539 338 aa14.58□□□□□ -0.08
EBF1-201ENST00000313708 ERLIN1O75477 346 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 KIAA0754O94854 1291 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 CADPSQ9ULU8 1353 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 SKILP12757 684 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 MTHFSP49914 203 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 CD2BP2O95400 341 aaKnown RBP14.57□□□□□ -0.08
EBF1-201ENST00000313708 ZSCAN26Q16670 478 aa14.57□□□□□ -0.08
EBF1-201ENST00000313708 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
EBF1-201ENST00000313708 CEBPZQ03701 1054 aaKnown RBP14.56□□□□□ -0.08
EBF1-201ENST00000313708 NEMFO60524 1076 aa14.56□□□□□ -0.08
EBF1-201ENST00000313708 ZNF622Q969S3 477 aaKnown RBP eCLIP14.56□□□□□ -0.08
EBF1-201ENST00000313708 CT47B1P0C2W7 299 aaPredicted RBP14.56□□□□□ -0.08
EBF1-201ENST00000313708 FAM200AQ8TCP9 573 aa14.56□□□□□ -0.08
EBF1-201ENST00000313708 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.55□□□□□ -0.08
EBF1-201ENST00000313708 CDR1P51861 262 aa14.55□□□□□ -0.08
EBF1-201ENST00000313708 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
EBF1-201ENST00000313708 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
EBF1-201ENST00000313708 GADD45BO75293 160 aaPredicted RBP14.55□□□□□ -0.08
EBF1-201ENST00000313708 CASQ1P31415 396 aa14.55□□□□□ -0.08
EBF1-201ENST00000313708 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
EBF1-201ENST00000313708 DDX41Q9UJV9 622 aaKnown RBP14.55□□□□□ -0.08
EBF1-201ENST00000313708 FGD5Q6ZNL6 1462 aa14.54□□□□□ -0.08
EBF1-201ENST00000313708 FERMT3Q86UX7 667 aa14.54□□□□□ -0.08
EBF1-201ENST00000313708 DISP3Q9P2K9 1392 aa14.54□□□□□ -0.08
EBF1-201ENST00000313708 KINO60870 393 aaKnown RBP14.54□□□□□ -0.08
EBF1-201ENST00000313708 SFPQP23246 707 aaKnown RBP eCLIP14.54□□□□□ -0.08
EBF1-201ENST00000313708 HNRNPMP52272 730 aaKnown RBP eCLIP14.54□□□□□ -0.08
EBF1-201ENST00000313708 ANO6Q4KMQ2 910 aa14.54□□□□□ -0.08
EBF1-201ENST00000313708 CNPY4Q8N129 248 aa14.54□□□□□ -0.08
EBF1-201ENST00000313708 CASTP20810 708 aaKnown RBP14.53□□□□□ -0.08
EBF1-201ENST00000313708 ZNF165P49910 485 aa14.53□□□□□ -0.08
EBF1-201ENST00000313708 RAD51AP2Q09MP3 1159 aa14.53□□□□□ -0.08
EBF1-201ENST00000313708 RUFY1Q96T51 708 aa14.53□□□□□ -0.08
EBF1-201ENST00000313708 ZNF215Q9UL58 517 aaPredicted RBP14.53□□□□□ -0.08
EBF1-201ENST00000313708 GPRASP1Q5JY77 1395 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms