RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 CFAP53Q96M91 514 aa25.14■■□□□ 1.62
CDK4-202ENST00000312990 RGPD1P0DJD0 1748 aa25.13■■□□□ 1.61
CDK4-202ENST00000312990 ZBTB7CA1YPR0 619 aa25.13■■□□□ 1.61
CDK4-202ENST00000312990 COL14A1Q05707 1796 aaKnown RBP25.12■■□□□ 1.61
CDK4-202ENST00000312990 PNISRQ8TF01 805 aaKnown RBP25.12■■□□□ 1.61
CDK4-202ENST00000312990 IP6K1Q92551 441 aa25.12■■□□□ 1.61
CDK4-202ENST00000312990 PLCH1Q4KWH8 1693 aa25.11■■□□□ 1.61
CDK4-202ENST00000312990 FBXO41Q8TF61 875 aa25.11■■□□□ 1.61
CDK4-202ENST00000312990 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
CDK4-202ENST00000312990 CHRNA2Q15822 529 aa25.1■■□□□ 1.61
CDK4-202ENST00000312990 AXIN2Q9Y2T1 843 aa25.1■■□□□ 1.61
CDK4-202ENST00000312990 PRDM11Q9NQV5 511 aa25.09■■□□□ 1.61
CDK4-202ENST00000312990 CAMTA1Q9Y6Y1 1673 aa25.08■■□□□ 1.61
CDK4-202ENST00000312990 DIAPH1O60610 1272 aaKnown RBP25.08■■□□□ 1.61
CDK4-202ENST00000312990 LRP6O75581 1613 aa25.08■■□□□ 1.61
CDK4-202ENST00000312990 IL13P35225 146 aa25.07■■□□□ 1.6
CDK4-202ENST00000312990 EIF4A2Q14240 407 aaKnown RBP25.07■■□□□ 1.6
CDK4-202ENST00000312990 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
CDK4-202ENST00000312990 SPATA31A6Q5VVP1 1343 aa25.07■■□□□ 1.6
CDK4-202ENST00000312990 FAM83GA6ND36 823 aa25.06■■□□□ 1.6
CDK4-202ENST00000312990 NUTM2BA6NNL0 878 aaPredicted RBP25.06■■□□□ 1.6
CDK4-202ENST00000312990 NUTM2EB1AL46 878 aaPredicted RBP25.06■■□□□ 1.6
CDK4-202ENST00000312990 NUTM2AQ8IVF1 878 aaPredicted RBP25.06■■□□□ 1.6
CDK4-202ENST00000312990 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
CDK4-202ENST00000312990 NWD2Q9ULI1 1742 aa25.04■■□□□ 1.6
CDK4-202ENST00000312990 NRAPQ86VF7 1730 aa25.04■■□□□ 1.6
CDK4-202ENST00000312990 ADAMTS2O95450 1211 aa25.03■■□□□ 1.6
CDK4-202ENST00000312990 COL5A2P05997 1499 aaPredicted RBP25.02■■□□□ 1.6
CDK4-202ENST00000312990 ERBB3P21860 1342 aa25.01■■□□□ 1.59
CDK4-202ENST00000312990 WDR43Q15061 677 aaKnown RBP eCLIP25.01■■□□□ 1.59
CDK4-202ENST00000312990 LTV1Q96GA3 475 aaPredicted RBP25.01■■□□□ 1.59
CDK4-202ENST00000312990 ADAMTS8Q9UP79 889 aa25.01■■□□□ 1.59
CDK4-202ENST00000312990 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
CDK4-202ENST00000312990 U2SURPO15042 1029 aaKnown RBP25■■□□□ 1.59
CDK4-202ENST00000312990 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
CDK4-202ENST00000312990 U2AF1L5P0DN76 240 aaPredicted RBP24.97■■□□□ 1.59
CDK4-202ENST00000312990 U2AF1Q01081 240 aaKnown RBP eCLIP24.97■■□□□ 1.59
CDK4-202ENST00000312990 EYA1Q99502 592 aa24.97■■□□□ 1.59
CDK4-202ENST00000312990 SLIT2O94813 1529 aa24.97■■□□□ 1.59
CDK4-202ENST00000312990 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
CDK4-202ENST00000312990 BTG4Q9NY30 223 aa24.95■■□□□ 1.58
CDK4-202ENST00000312990 NCAPD2Q15021 1401 aa24.95■■□□□ 1.58
CDK4-202ENST00000312990 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.94■■□□□ 1.58
CDK4-202ENST00000312990 NBPF6Q5VWK0 638 aa24.94■■□□□ 1.58
CDK4-202ENST00000312990 NBPF4Q96M43 638 aa24.94■■□□□ 1.58
CDK4-202ENST00000312990 KDRP35968 1356 aa24.93■■□□□ 1.58
CDK4-202ENST00000312990 WDR17Q8IZU2 1322 aa24.93■■□□□ 1.58
CDK4-202ENST00000312990 HMOX1P09601 288 aa24.92■■□□□ 1.58
CDK4-202ENST00000312990 AEBP1Q8IUX7 1158 aa24.92■■□□□ 1.58
CDK4-202ENST00000312990 SULT6B1Q6IMI4 303 aa24.91■■□□□ 1.58
CDK4-202ENST00000312990 C8orf37Q96NL8 207 aa24.91■■□□□ 1.58
CDK4-202ENST00000312990 RSPH6AQ9H0K4 717 aa24.91■■□□□ 1.58
CDK4-202ENST00000312990 USHBP1Q8N6Y0 703 aa24.9■■□□□ 1.58
CDK4-202ENST00000312990 STRN4Q9NRL3 753 aa24.9■■□□□ 1.58
CDK4-202ENST00000312990 WNK3Q9BYP7 1800 aa24.9■■□□□ 1.58
CDK4-202ENST00000312990 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
CDK4-202ENST00000312990 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.58
CDK4-202ENST00000312990 FCHSD2O94868 740 aa24.88■■□□□ 1.57
CDK4-202ENST00000312990 CCDC146Q8IYE0 955 aa24.88■■□□□ 1.57
CDK4-202ENST00000312990 BCL9LQ86UU0 1499 aa24.88■■□□□ 1.57
CDK4-202ENST00000312990 LARP1Q6PKG0 1096 aaKnown RBP24.88■■□□□ 1.57
CDK4-202ENST00000312990 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
CDK4-202ENST00000312990 NLRP2Q9NX02 1062 aa24.88■■□□□ 1.57
CDK4-202ENST00000312990 NGLY1Q96IV0 654 aa24.87■■□□□ 1.57
CDK4-202ENST00000312990 CRB1P82279 1406 aa24.87■■□□□ 1.57
CDK4-202ENST00000312990 EVA1CP58658 441 aa24.86■■□□□ 1.57
CDK4-202ENST00000312990 MEX3CQ5U5Q3 659 aaKnown RBP24.86■■□□□ 1.57
CDK4-202ENST00000312990 FNBP4Q8N3X1 1017 aaPredicted RBP24.86■■□□□ 1.57
CDK4-202ENST00000312990 PRKAR2BP31323 418 aa24.85■■□□□ 1.57
CDK4-202ENST00000312990 TOM1L2Q6ZVM7 507 aa24.85■■□□□ 1.57
CDK4-202ENST00000312990 PARP4Q9UKK3 1724 aaKnown RBP24.84■■□□□ 1.57
CDK4-202ENST00000312990 RUNDC1Q96C34 613 aa24.83■■□□□ 1.57
CDK4-202ENST00000312990 CARD10Q9BWT7 1032 aa24.82■■□□□ 1.56
CDK4-202ENST00000312990 UNC5CLQ8IV45 518 aa24.81■■□□□ 1.56
CDK4-202ENST00000312990 PKD1L3Q7Z443 1732 aa24.81■■□□□ 1.56
CDK4-202ENST00000312990 VIRMAQ69YN4 1812 aaKnown RBP24.81■■□□□ 1.56
CDK4-202ENST00000312990 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
CDK4-202ENST00000312990 MEGF6O75095 1541 aa24.81■■□□□ 1.56
CDK4-202ENST00000312990 SENP3-EIF4A1A0A087X0R7 540 aa24.8■■□□□ 1.56
CDK4-202ENST00000312990 YTHDC1Q96MU7 727 aaKnown RBP24.8■■□□□ 1.56
CDK4-202ENST00000312990 PNNQ9H307 717 aaKnown RBP24.8■■□□□ 1.56
CDK4-202ENST00000312990 AFF2P51816 1311 aa24.79■■□□□ 1.56
CDK4-202ENST00000312990 SHANK3Q9BYB0 1731 aa24.78■■□□□ 1.56
CDK4-202ENST00000312990 APAF1O14727 1248 aa24.78■■□□□ 1.56
CDK4-202ENST00000312990 USP21Q9UK80 565 aa24.78■■□□□ 1.56
CDK4-202ENST00000312990 MAPK8IP3Q9UPT6 1336 aa24.77■■□□□ 1.56
CDK4-202ENST00000312990 HNRNPUQ00839 825 aaKnown RBP eCLIP24.77■■□□□ 1.56
CDK4-202ENST00000312990 TCP11L2Q8N4U5 519 aa24.77■■□□□ 1.56
CDK4-202ENST00000312990 USP35Q9P2H5 1018 aa24.76■■□□□ 1.55
CDK4-202ENST00000312990 SPATA31A1Q5TZJ5 1347 aa24.76■■□□□ 1.55
CDK4-202ENST00000312990 SPATA31A5Q5VU36 1347 aa24.76■■□□□ 1.55
CDK4-202ENST00000312990 SPATA31A7Q8IWB4 1347 aa24.76■■□□□ 1.55
CDK4-202ENST00000312990 VPS72Q15906 364 aa24.75■■□□□ 1.55
CDK4-202ENST00000312990 DISP2A7MBM2 1401 aa24.74■■□□□ 1.55
CDK4-202ENST00000312990 GLI3P10071 1580 aa24.73■■□□□ 1.55
CDK4-202ENST00000312990 RAPGEF4Q8WZA2 1011 aa24.73■■□□□ 1.55
CDK4-202ENST00000312990 OVOS2A0A0G2JMS6 1433 aa24.73■■□□□ 1.55
CDK4-202ENST00000312990 PLEKHG2Q9H7P9 1386 aa24.73■■□□□ 1.55
CDK4-202ENST00000312990 NEFMP07197 916 aa24.72■■□□□ 1.55
CDK4-202ENST00000312990 RRP7AQ9Y3A4 280 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms