RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 EVA1CP58658 441 aa20.49■□□□□ 0.87
PPP1CA-201ENST00000312989 CCDC125Q86Z20 511 aa20.49■□□□□ 0.87
PPP1CA-201ENST00000312989 TCP11L2Q8N4U5 519 aa20.49■□□□□ 0.87
PPP1CA-201ENST00000312989 USP35Q9P2H5 1018 aa20.49■□□□□ 0.87
PPP1CA-201ENST00000312989 WDR17Q8IZU2 1322 aa20.49■□□□□ 0.87
PPP1CA-201ENST00000312989 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
PPP1CA-201ENST00000312989 ZBTB7CA1YPR0 619 aa20.47■□□□□ 0.87
PPP1CA-201ENST00000312989 THRAP3Q9Y2W1 955 aaKnown RBP20.47■□□□□ 0.87
PPP1CA-201ENST00000312989 A0A0G2JS52 829 aa20.46■□□□□ 0.87
PPP1CA-201ENST00000312989 MYT1Q01538 1121 aa20.46■□□□□ 0.87
PPP1CA-201ENST00000312989 DISP2A7MBM2 1401 aa20.46■□□□□ 0.87
PPP1CA-201ENST00000312989 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
PPP1CA-201ENST00000312989 DEFB132Q7Z7B7 95 aa20.44■□□□□ 0.86
PPP1CA-201ENST00000312989 CARD14Q9BXL6 1004 aa20.44■□□□□ 0.86
PPP1CA-201ENST00000312989 LRRC37A3O60309 1634 aa20.43■□□□□ 0.86
PPP1CA-201ENST00000312989 FYB1O15117 783 aa20.43■□□□□ 0.86
PPP1CA-201ENST00000312989 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
PPP1CA-201ENST00000312989 ERBB3P21860 1342 aa20.42■□□□□ 0.86
PPP1CA-201ENST00000312989 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
PPP1CA-201ENST00000312989 RGPD5Q99666 1765 aa20.42■□□□□ 0.86
PPP1CA-201ENST00000312989 FBLN1P23142 703 aa20.41■□□□□ 0.86
PPP1CA-201ENST00000312989 CARD10Q9BWT7 1032 aa20.41■□□□□ 0.86
PPP1CA-201ENST00000312989 PEAK1Q9H792 1746 aa20.4■□□□□ 0.86
PPP1CA-201ENST00000312989 SRCAPQ6ZRS2 3230 aa20.4■□□□□ 0.86
PPP1CA-201ENST00000312989 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
PPP1CA-201ENST00000312989 WNK3Q9BYP7 1800 aa20.4■□□□□ 0.86
PPP1CA-201ENST00000312989 TNS1Q9HBL0 1735 aaKnown RBP20.4■□□□□ 0.86
PPP1CA-201ENST00000312989 EIF4G2P78344 907 aaKnown RBP eCLIP20.39■□□□□ 0.85
PPP1CA-201ENST00000312989 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.85
PPP1CA-201ENST00000312989 LTN1O94822 1766 aa20.39■□□□□ 0.85
PPP1CA-201ENST00000312989 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
PPP1CA-201ENST00000312989 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
PPP1CA-201ENST00000312989 COG3Q96JB2 828 aa20.37■□□□□ 0.85
PPP1CA-201ENST00000312989 GGNBP2Q9H3C7 697 aa20.37■□□□□ 0.85
PPP1CA-201ENST00000312989 IP6K1Q92551 441 aa20.36■□□□□ 0.85
PPP1CA-201ENST00000312989 FAM196AQ6ZSG2 479 aa20.35■□□□□ 0.85
PPP1CA-201ENST00000312989 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
PPP1CA-201ENST00000312989 RGPD1P0DJD0 1748 aa20.35■□□□□ 0.85
PPP1CA-201ENST00000312989 ANKRD24Q8TF21 1146 aa20.34■□□□□ 0.85
PPP1CA-201ENST00000312989 BCL9O00512 1426 aa20.34■□□□□ 0.85
PPP1CA-201ENST00000312989 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
PPP1CA-201ENST00000312989 CSB-PGBD3P0DP91 1061 aa20.33■□□□□ 0.84
PPP1CA-201ENST00000312989 HOXC9P31274 260 aa20.33■□□□□ 0.84
PPP1CA-201ENST00000312989 OVOS2A0A0G2JMS6 1433 aa20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 TNS2Q63HR2 1409 aa20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 TRIM37O94972 964 aa20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 MARCH10Q8NA82 808 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-201ENST00000312989 KIF20BQ96Q89 1820 aa20.31■□□□□ 0.84
PPP1CA-201ENST00000312989 RRS1Q15050 365 aaKnown RBP20.31■□□□□ 0.84
PPP1CA-201ENST00000312989 DDB1Q16531 1140 aa20.31■□□□□ 0.84
PPP1CA-201ENST00000312989 EN1Q05925 392 aaPredicted RBP20.3■□□□□ 0.84
PPP1CA-201ENST00000312989 SF3B2Q13435 895 aaKnown RBP20.3■□□□□ 0.84
PPP1CA-201ENST00000312989 FAM208AQ9UK61 1670 aaKnown RBP20.29■□□□□ 0.84
PPP1CA-201ENST00000312989 BAG6P46379 1132 aa20.29■□□□□ 0.84
PPP1CA-201ENST00000312989 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
PPP1CA-201ENST00000312989 PTF1AQ7RTS3 328 aa20.28■□□□□ 0.84
PPP1CA-201ENST00000312989 NLRP2Q9NX02 1062 aa20.27■□□□□ 0.84
PPP1CA-201ENST00000312989 EZH2Q15910 746 aaKnown RBP20.26■□□□□ 0.83
PPP1CA-201ENST00000312989 KIF24Q5T7B8 1368 aa20.25■□□□□ 0.83
PPP1CA-201ENST00000312989 IL2RBP14784 551 aa20.24■□□□□ 0.83
PPP1CA-201ENST00000312989 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
PPP1CA-201ENST00000312989 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
PPP1CA-201ENST00000312989 AMPHP49418 695 aa20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 PANK3Q9H999 370 aa20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 INSRP06213 1382 aa20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 MEGF6O75095 1541 aa20.23■□□□□ 0.83
PPP1CA-201ENST00000312989 APBA3O96018 575 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 POLR3GLQ9BT43 218 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 FLT4P35916 1363 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 PARD3Q8TEW0 1356 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 RREB1Q92766 1687 aa20.22■□□□□ 0.83
PPP1CA-201ENST00000312989 EXOC5O00471 708 aa20.21■□□□□ 0.83
PPP1CA-201ENST00000312989 NBPF6Q5VWK0 638 aa20.21■□□□□ 0.83
PPP1CA-201ENST00000312989 NBPF4Q96M43 638 aa20.21■□□□□ 0.83
PPP1CA-201ENST00000312989 SBF2Q86WG5 1849 aa20.21■□□□□ 0.83
PPP1CA-201ENST00000312989 NCAPD2Q15021 1401 aa20.21■□□□□ 0.83
PPP1CA-201ENST00000312989 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
PPP1CA-201ENST00000312989 BCL11BQ9C0K0 894 aaPredicted RBP20.19■□□□□ 0.82
PPP1CA-201ENST00000312989 NUP188Q5SRE5 1749 aa20.18■□□□□ 0.82
PPP1CA-201ENST00000312989 SHANK3Q9BYB0 1731 aa20.17■□□□□ 0.82
PPP1CA-201ENST00000312989 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
PPP1CA-201ENST00000312989 RGPD3A6NKT7 1758 aaPredicted RBP20.17■□□□□ 0.82
PPP1CA-201ENST00000312989 RGPD4Q7Z3J3 1758 aa20.17■□□□□ 0.82
PPP1CA-201ENST00000312989 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
PPP1CA-201ENST00000312989 PLSCR1O15162 318 aa20.16■□□□□ 0.82
PPP1CA-201ENST00000312989 KCNQ2O43526 872 aa20.16■□□□□ 0.82
PPP1CA-201ENST00000312989 WASHC2AQ641Q2 1341 aa20.16■□□□□ 0.82
PPP1CA-201ENST00000312989 NHSQ6T4R5 1651 aa20.15■□□□□ 0.82
PPP1CA-201ENST00000312989 PROM2Q8N271 834 aa20.15■□□□□ 0.82
PPP1CA-201ENST00000312989 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
PPP1CA-201ENST00000312989 NSD2O96028 1365 aa20.15■□□□□ 0.82
PPP1CA-201ENST00000312989 PSDA5PKW4 1024 aaPredicted RBP20.14■□□□□ 0.81
PPP1CA-201ENST00000312989 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.81
PPP1CA-201ENST00000312989 PER1O15534 1290 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms