RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
GFM1-202ENST00000312756 NRKQ7Z2Y5 1582 aa10.12□□□□□ -0.79
GFM1-202ENST00000312756 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
GFM1-202ENST00000312756 RALBP1Q15311 655 aa10.12□□□□□ -0.79
GFM1-202ENST00000312756 MYBBP1AQ9BQG0 1328 aaKnown RBP10.12□□□□□ -0.79
GFM1-202ENST00000312756 ANKARQ7Z5J8 1434 aa10.12□□□□□ -0.79
GFM1-202ENST00000312756 C1orf167Q5SNV9 1468 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 USP6P35125 1406 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 MST1RQ04912 1400 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 MSH6P52701 1360 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 ATF3P18847 181 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 MORC1Q86VD1 984 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 FOXO3O43524 673 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 RRP9O43818 475 aaKnown RBP10.11□□□□□ -0.79
GFM1-202ENST00000312756 NUTM2GQ5VZR2 741 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 FAM9BQ8IZU0 186 aa10.11□□□□□ -0.79
GFM1-202ENST00000312756 EDC4Q6P2E9 1401 aaKnown RBP10.1□□□□□ -0.79
GFM1-202ENST00000312756 NCOA3Q9Y6Q9 1424 aa10.1□□□□□ -0.79
GFM1-202ENST00000312756 POLR3AO14802 1390 aaPredicted RBP10.1□□□□□ -0.79
GFM1-202ENST00000312756 NPC1L1Q9UHC9 1359 aa10.1□□□□□ -0.79
GFM1-202ENST00000312756 TTC21BQ7Z4L5 1316 aa10.1□□□□□ -0.79
GFM1-202ENST00000312756 CIZ1Q9ULV3 898 aaPredicted RBP10.1□□□□□ -0.79
GFM1-202ENST00000312756 ANKRD26Q9UPS8 1709 aa10.1□□□□□ -0.79
GFM1-202ENST00000312756 SLC24A3Q9HC58 644 aa10.09□□□□□ -0.79
GFM1-202ENST00000312756 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
GFM1-202ENST00000312756 SOX12O15370 315 aa10.09□□□□□ -0.79
GFM1-202ENST00000312756 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
GFM1-202ENST00000312756 NECTIN2Q92692 538 aa10.09□□□□□ -0.79
GFM1-202ENST00000312756 ZFP91Q96JP5 570 aaPredicted RBP10.09□□□□□ -0.79
GFM1-202ENST00000312756 IQSEC2Q5JU85 1478 aa10.09□□□□□ -0.79
GFM1-202ENST00000312756 PIK3C2AO00443 1686 aa10.08□□□□□ -0.8
GFM1-202ENST00000312756 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
GFM1-202ENST00000312756 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
GFM1-202ENST00000312756 CADPS2Q86UW7 1296 aa10.07□□□□□ -0.8
GFM1-202ENST00000312756 NLRP13Q86W25 1043 aa10.07□□□□□ -0.8
GFM1-202ENST00000312756 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
GFM1-202ENST00000312756 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
GFM1-202ENST00000312756 DCCP43146 1447 aa10.07□□□□□ -0.8
GFM1-202ENST00000312756 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
GFM1-202ENST00000312756 MTHFSP49914 203 aa10.06□□□□□ -0.8
GFM1-202ENST00000312756 PSME1Q06323 249 aa10.06□□□□□ -0.8
GFM1-202ENST00000312756 MAP2P11137 1827 aaKnown RBP10.06□□□□□ -0.8
GFM1-202ENST00000312756 BRD4O60885 1362 aaPredicted RBP10.06□□□□□ -0.8
GFM1-202ENST00000312756 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
GFM1-202ENST00000312756 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
GFM1-202ENST00000312756 NSD2O96028 1365 aa10.05□□□□□ -0.8
GFM1-202ENST00000312756 TOM1O60784 492 aa10.05□□□□□ -0.8
GFM1-202ENST00000312756 GTF2E1P29083 439 aaPredicted RBP10.05□□□□□ -0.8
GFM1-202ENST00000312756 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
GFM1-202ENST00000312756 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
GFM1-202ENST00000312756 SLAIN2Q9P270 581 aa10.05□□□□□ -0.8
GFM1-202ENST00000312756 TRPM3Q9HCF6 1732 aaPredicted RBP10.04□□□□□ -0.8
GFM1-202ENST00000312756 PPM1GO15355 546 aaPredicted RBP10.04□□□□□ -0.8
GFM1-202ENST00000312756 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
GFM1-202ENST00000312756 KRT28Q7Z3Y7 464 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 ABTB2Q8N961 1025 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 COG3Q96JB2 828 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 EMILIN1Q9Y6C2 1016 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 U3KPZ7 1027 aaPredicted RBP10.04□□□□□ -0.8
GFM1-202ENST00000312756 OVOS2A0A0J9YW53 1432 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 OVOS2Q6IE36 1432 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 NLRP6P59044 892 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 CHMP4BQ9H444 224 aaKnown RBP10.04□□□□□ -0.8
GFM1-202ENST00000312756 KIF1AQ12756 1690 aa10.04□□□□□ -0.8
GFM1-202ENST00000312756 TICAM2Q86XR7 235 aa10.03□□□□□ -0.8
GFM1-202ENST00000312756 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.8
GFM1-202ENST00000312756 KCNV2Q8TDN2 545 aa10.02□□□□□ -0.8
GFM1-202ENST00000312756 POLKQ9UBT6 870 aa10.02□□□□□ -0.8
GFM1-202ENST00000312756 SHPRHQ149N8 1683 aa10.02□□□□□ -0.81
GFM1-202ENST00000312756 TTC21AQ8NDW8 1320 aa10.02□□□□□ -0.81
GFM1-202ENST00000312756 ROBO1Q9Y6N7 1651 aa10.01□□□□□ -0.81
GFM1-202ENST00000312756 SECISBP2LQ93073 1101 aaKnown RBP10.01□□□□□ -0.81
GFM1-202ENST00000312756 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
GFM1-202ENST00000312756 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
GFM1-202ENST00000312756 PEAK1Q9H792 1746 aa10.01□□□□□ -0.81
GFM1-202ENST00000312756 PXDNQ92626 1479 aa10□□□□□ -0.81
GFM1-202ENST00000312756 CANXP27824 592 aaKnown RBP10□□□□□ -0.81
GFM1-202ENST00000312756 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
GFM1-202ENST00000312756 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
GFM1-202ENST00000312756 ALS2Q96Q42 1657 aa10□□□□□ -0.81
GFM1-202ENST00000312756 COL3A1P02461 1466 aaPredicted RBP9.99□□□□□ -0.81
GFM1-202ENST00000312756 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
GFM1-202ENST00000312756 RNF25Q96BH1 459 aaPredicted RBP9.99□□□□□ -0.81
GFM1-202ENST00000312756 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
GFM1-202ENST00000312756 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
GFM1-202ENST00000312756 NPHP3Q7Z494 1330 aa9.98□□□□□ -0.81
GFM1-202ENST00000312756 MED1Q15648 1581 aaPredicted RBP9.98□□□□□ -0.81
GFM1-202ENST00000312756 IGSF3O75054 1194 aa9.98□□□□□ -0.81
GFM1-202ENST00000312756 HSP90AA2PQ14568 343 aaPredicted RBP9.98□□□□□ -0.81
GFM1-202ENST00000312756 FBXO41Q8TF61 875 aa9.98□□□□□ -0.81
GFM1-202ENST00000312756 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
GFM1-202ENST00000312756 MAP3K19Q56UN5 1328 aa9.98□□□□□ -0.81
GFM1-202ENST00000312756 USP54Q70EL1 1684 aa9.98□□□□□ -0.81
GFM1-202ENST00000312756 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
GFM1-202ENST00000312756 HSP90AB2PQ58FF8 381 aa9.97□□□□□ -0.81
GFM1-202ENST00000312756 LTN1O94822 1766 aa9.97□□□□□ -0.81
GFM1-202ENST00000312756 APBB1O00213 710 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms