RNA–Protein interactions for RNA: ENST00000312734.8

CGREF1-202, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CGREF1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-202ENST00000312734 CDK12Q9NYV4 1490 aaPredicted RBP36.56■■■■□ 3.44
CGREF1-202ENST00000312734 AXIN2Q9Y2T1 843 aa36.55■■■■□ 3.44
CGREF1-202ENST00000312734 KIF24Q5T7B8 1368 aa36.54■■■■□ 3.44
CGREF1-202ENST00000312734 FAM83GA6ND36 823 aa36.53■■■■□ 3.44
CGREF1-202ENST00000312734 SPATA31A6Q5VVP1 1343 aa36.53■■■■□ 3.44
CGREF1-202ENST00000312734 DIAPH1O60610 1272 aaKnown RBP36.52■■■■□ 3.44
CGREF1-202ENST00000312734 LTV1Q96GA3 475 aaPredicted RBP36.52■■■■□ 3.44
CGREF1-202ENST00000312734 RTL1A6NKG5 1358 aa36.52■■■■□ 3.44
CGREF1-202ENST00000312734 INSRP06213 1382 aa36.52■■■■□ 3.44
CGREF1-202ENST00000312734 COL3A1P02461 1466 aaPredicted RBP36.49■■■■□ 3.43
CGREF1-202ENST00000312734 EIF4A2Q14240 407 aaKnown RBP36.48■■■■□ 3.43
CGREF1-202ENST00000312734 PNISRQ8TF01 805 aaKnown RBP36.48■■■■□ 3.43
CGREF1-202ENST00000312734 FAM9BQ8IZU0 186 aa36.48■■■■□ 3.43
CGREF1-202ENST00000312734 IL13P35225 146 aa36.46■■■■□ 3.43
CGREF1-202ENST00000312734 U2SURPO15042 1029 aaKnown RBP36.45■■■■□ 3.43
CGREF1-202ENST00000312734 NUDCQ9Y266 331 aa36.45■■■■□ 3.43
CGREF1-202ENST00000312734 WDR43Q15061 677 aaKnown RBP eCLIP36.45■■■■□ 3.42
CGREF1-202ENST00000312734 COL18A1P39060 1754 aa36.44■■■■□ 3.42
CGREF1-202ENST00000312734 ANKRD24Q8TF21 1146 aa36.43■■■■□ 3.42
CGREF1-202ENST00000312734 BLMP54132 1417 aaPredicted RBP36.43■■■■□ 3.42
CGREF1-202ENST00000312734 RGPD5Q99666 1765 aa36.41■■■■□ 3.42
CGREF1-202ENST00000312734 LRP6O75581 1613 aa36.41■■■■□ 3.42
CGREF1-202ENST00000312734 BTG4Q9NY30 223 aa36.41■■■■□ 3.42
CGREF1-202ENST00000312734 U2AF1L5P0DN76 240 aaPredicted RBP36.39■■■■□ 3.42
CGREF1-202ENST00000312734 U2AF1Q01081 240 aaKnown RBP eCLIP36.39■■■■□ 3.42
CGREF1-202ENST00000312734 CAMTA1Q9Y6Y1 1673 aa36.38■■■■□ 3.42
CGREF1-202ENST00000312734 MEX3CQ5U5Q3 659 aaKnown RBP36.38■■■■□ 3.41
CGREF1-202ENST00000312734 C8orf37Q96NL8 207 aa36.38■■■■□ 3.41
CGREF1-202ENST00000312734 ADAMTS8Q9UP79 889 aa36.38■■■■□ 3.41
CGREF1-202ENST00000312734 CSB-PGBD3P0DP91 1061 aa36.37■■■■□ 3.41
CGREF1-202ENST00000312734 ABCC6O95255 1503 aa36.36■■■■□ 3.41
CGREF1-202ENST00000312734 LMO7Q8WWI1 1683 aa36.36■■■■□ 3.41
CGREF1-202ENST00000312734 EVA1CP58658 441 aa36.36■■■■□ 3.41
CGREF1-202ENST00000312734 STRN4Q9NRL3 753 aa36.36■■■■□ 3.41
CGREF1-202ENST00000312734 COL14A1Q05707 1796 aaKnown RBP36.36■■■■□ 3.41
CGREF1-202ENST00000312734 ERBB3P21860 1342 aa36.35■■■■□ 3.41
CGREF1-202ENST00000312734 NGLY1Q96IV0 654 aa36.35■■■■□ 3.41
CGREF1-202ENST00000312734 EYA1Q99502 592 aa36.35■■■■□ 3.41
CGREF1-202ENST00000312734 HMOX1P09601 288 aa36.31■■■■□ 3.4
CGREF1-202ENST00000312734 NBPF6Q5VWK0 638 aa36.31■■■■□ 3.4
CGREF1-202ENST00000312734 NBPF4Q96M43 638 aa36.31■■■■□ 3.4
CGREF1-202ENST00000312734 COL5A2P05997 1499 aaPredicted RBP36.3■■■■□ 3.4
CGREF1-202ENST00000312734 USHBP1Q8N6Y0 703 aa36.3■■■■□ 3.4
CGREF1-202ENST00000312734 NLRP2Q9NX02 1062 aa36.3■■■■□ 3.4
CGREF1-202ENST00000312734 SULT6B1Q6IMI4 303 aa36.28■■■■□ 3.4
CGREF1-202ENST00000312734 LARP1Q6PKG0 1096 aaKnown RBP36.26■■■■□ 3.4
CGREF1-202ENST00000312734 TOM1L2Q6ZVM7 507 aa36.26■■■■□ 3.4
CGREF1-202ENST00000312734 AEBP1Q8IUX7 1158 aa36.26■■■■□ 3.4
CGREF1-202ENST00000312734 WDR17Q8IZU2 1322 aa36.26■■■■□ 3.4
CGREF1-202ENST00000312734 IGSF1Q8N6C5 1336 aa36.26■■■■□ 3.39
CGREF1-202ENST00000312734 PLCH1Q4KWH8 1693 aa36.25■■■■□ 3.39
CGREF1-202ENST00000312734 CCDC146Q8IYE0 955 aa36.24■■■■□ 3.39
CGREF1-202ENST00000312734 RGPD2P0DJD1 1756 aa36.23■■■■□ 3.39
CGREF1-202ENST00000312734 SLIT2O94813 1529 aa36.23■■■■□ 3.39
CGREF1-202ENST00000312734 FNBP4Q8N3X1 1017 aaPredicted RBP36.22■■■■□ 3.39
CGREF1-202ENST00000312734 RGPD1P0DJD0 1748 aa36.22■■■■□ 3.39
CGREF1-202ENST00000312734 FCHSD2O94868 740 aa36.21■■■■□ 3.39
CGREF1-202ENST00000312734 RSPH6AQ9H0K4 717 aa36.2■■■■□ 3.39
CGREF1-202ENST00000312734 PRKAR2BP31323 418 aa36.19■■■■□ 3.38
CGREF1-202ENST00000312734 UNC5CLQ8IV45 518 aa36.19■■■■□ 3.38
CGREF1-202ENST00000312734 USP21Q9UK80 565 aa36.19■■■■□ 3.38
CGREF1-202ENST00000312734 USP35Q9P2H5 1018 aa36.18■■■■□ 3.38
CGREF1-202ENST00000312734 SENP3-EIF4A1A0A087X0R7 540 aa36.17■■■■□ 3.38
CGREF1-202ENST00000312734 ILDR1Q86SU0 546 aaPredicted RBP36.17■■■■□ 3.38
CGREF1-202ENST00000312734 AFF2P51816 1311 aa36.16■■■■□ 3.38
CGREF1-202ENST00000312734 CARD10Q9BWT7 1032 aa36.16■■■■□ 3.38
CGREF1-202ENST00000312734 NWD2Q9ULI1 1742 aa36.15■■■■□ 3.38
CGREF1-202ENST00000312734 BCL9LQ86UU0 1499 aa36.15■■■■□ 3.38
CGREF1-202ENST00000312734 PNNQ9H307 717 aaKnown RBP36.15■■■■□ 3.38
CGREF1-202ENST00000312734 CRB1P82279 1406 aa36.14■■■■□ 3.38
CGREF1-202ENST00000312734 PLEKHF1Q96S99 279 aa36.14■■■■□ 3.38
CGREF1-202ENST00000312734 CCDC9Q9Y3X0 531 aaKnown RBP36.14■■■■□ 3.38
CGREF1-202ENST00000312734 NRAPQ86VF7 1730 aa36.14■■■■□ 3.38
CGREF1-202ENST00000312734 FAM208AQ9UK61 1670 aaKnown RBP36.13■■■■□ 3.37
CGREF1-202ENST00000312734 RUNDC1Q96C34 613 aa36.13■■■■□ 3.37
CGREF1-202ENST00000312734 KDRP35968 1356 aa36.13■■■■□ 3.37
CGREF1-202ENST00000312734 YTHDC1Q96MU7 727 aaKnown RBP36.12■■■■□ 3.37
CGREF1-202ENST00000312734 PHACTR3Q96KR7 559 aa36.1■■■■□ 3.37
CGREF1-202ENST00000312734 NCAPD2Q15021 1401 aa36.09■■■■□ 3.37
CGREF1-202ENST00000312734 NEFMP07197 916 aa36.08■■■■□ 3.37
CGREF1-202ENST00000312734 MAPK8IP3Q9UPT6 1336 aa36.08■■■■□ 3.37
CGREF1-202ENST00000312734 RAPGEF4Q8WZA2 1011 aa36.07■■■■□ 3.36
CGREF1-202ENST00000312734 APAF1O14727 1248 aa36.06■■■■□ 3.36
CGREF1-202ENST00000312734 VPS72Q15906 364 aa36.06■■■■□ 3.36
CGREF1-202ENST00000312734 SPATA31A1Q5TZJ5 1347 aa36.05■■■■□ 3.36
CGREF1-202ENST00000312734 SPATA31A5Q5VU36 1347 aa36.04■■■■□ 3.36
CGREF1-202ENST00000312734 SPATA31A7Q8IWB4 1347 aa36.04■■■■□ 3.36
CGREF1-202ENST00000312734 TCP11L2Q8N4U5 519 aa36.04■■■■□ 3.36
CGREF1-202ENST00000312734 HNRNPUQ00839 825 aaKnown RBP eCLIP36.03■■■■□ 3.36
CGREF1-202ENST00000312734 SALL2Q9Y467 1007 aaPredicted RBP36.03■■■■□ 3.36
CGREF1-202ENST00000312734 TATP17735 454 aaPredicted RBP36.02■■■■□ 3.36
CGREF1-202ENST00000312734 NEUROD2Q15784 382 aa36.01■■■■□ 3.36
CGREF1-202ENST00000312734 RRP7AQ9Y3A4 280 aaKnown RBP36.01■■■■□ 3.36
CGREF1-202ENST00000312734 IL2RBP14784 551 aa36■■■■□ 3.35
CGREF1-202ENST00000312734 QTRT2Q9H974 415 aaKnown RBP35.98■■■■□ 3.35
CGREF1-202ENST00000312734 TRPC5Q9UL62 973 aaPredicted RBP35.98■■■■□ 3.35
CGREF1-202ENST00000312734 MEGF6O75095 1541 aa35.98■■■■□ 3.35
CGREF1-202ENST00000312734 MTHFSDQ2M296 383 aaKnown RBP35.97■■■■□ 3.35
CGREF1-202ENST00000312734 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.97■■■■□ 3.35
CGREF1-202ENST00000312734 THRAP3Q9Y2W1 955 aaKnown RBP35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms