RNA–Protein interactions for RNA: ENST00000312377.9

RACGAP1-201, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-201ENST00000312377 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
RACGAP1-201ENST00000312377 ELL2O00472 640 aaPredicted RBP12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 POLR3AO14802 1390 aaPredicted RBP12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 JCADQ9P266 1359 aa12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 ARHGEF10O15013 1369 aa12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
RACGAP1-201ENST00000312377 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
RACGAP1-201ENST00000312377 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
RACGAP1-201ENST00000312377 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
RACGAP1-201ENST00000312377 UTRNP46939 3433 aa12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 MPRIPQ6WCQ1 1025 aa12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 IP6K1Q92551 441 aa12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
RACGAP1-201ENST00000312377 DCCP43146 1447 aa12.79□□□□□ -0.36
RACGAP1-201ENST00000312377 NINLQ9Y2I6 1382 aa12.79□□□□□ -0.36
RACGAP1-201ENST00000312377 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
RACGAP1-201ENST00000312377 KCNQ4P56696 695 aa12.78□□□□□ -0.36
RACGAP1-201ENST00000312377 MCM10Q7L590 875 aa12.78□□□□□ -0.36
RACGAP1-201ENST00000312377 BCL11AQ9H165 835 aa12.78□□□□□ -0.36
RACGAP1-201ENST00000312377 CDC42BPGQ6DT37 1551 aa12.78□□□□□ -0.36
RACGAP1-201ENST00000312377 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.36
RACGAP1-201ENST00000312377 NCOA3Q9Y6Q9 1424 aa12.77□□□□□ -0.36
RACGAP1-201ENST00000312377 NWD1Q149M9 1564 aa12.77□□□□□ -0.36
RACGAP1-201ENST00000312377 USP32Q8NFA0 1604 aa12.77□□□□□ -0.37
RACGAP1-201ENST00000312377 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
RACGAP1-201ENST00000312377 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
RACGAP1-201ENST00000312377 RIPK4P57078 832 aa12.76□□□□□ -0.37
RACGAP1-201ENST00000312377 POTEAQ6S8J7 498 aa12.76□□□□□ -0.37
RACGAP1-201ENST00000312377 UNC5CLQ8IV45 518 aa12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 TCP11L2Q8N4U5 519 aa12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 ERBB3P21860 1342 aa12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 EXOC5O00471 708 aa12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
RACGAP1-201ENST00000312377 DDB1Q16531 1140 aa12.74□□□□□ -0.37
RACGAP1-201ENST00000312377 FLT4P35916 1363 aa12.74□□□□□ -0.37
RACGAP1-201ENST00000312377 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
RACGAP1-201ENST00000312377 PNISRQ8TF01 805 aaKnown RBP12.74□□□□□ -0.37
RACGAP1-201ENST00000312377 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
RACGAP1-201ENST00000312377 IL13P35225 146 aa12.73□□□□□ -0.37
RACGAP1-201ENST00000312377 NGEFQ8N5V2 710 aa12.73□□□□□ -0.37
RACGAP1-201ENST00000312377 PXDNQ92626 1479 aa12.73□□□□□ -0.37
RACGAP1-201ENST00000312377 RXRBP28702 533 aa12.73□□□□□ -0.37
RACGAP1-201ENST00000312377 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
RACGAP1-201ENST00000312377 SMG6Q86US8 1419 aaKnown RBP12.72□□□□□ -0.37
RACGAP1-201ENST00000312377 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
RACGAP1-201ENST00000312377 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
RACGAP1-201ENST00000312377 CDCA7LQ96GN5 454 aa12.72□□□□□ -0.37
RACGAP1-201ENST00000312377 PHLPP1O60346 1717 aa12.72□□□□□ -0.37
RACGAP1-201ENST00000312377 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
RACGAP1-201ENST00000312377 IL2RBP14784 551 aa12.71□□□□□ -0.37
RACGAP1-201ENST00000312377 GJD4Q96KN9 370 aaPredicted RBP12.71□□□□□ -0.37
RACGAP1-201ENST00000312377 TRPC5Q9UL62 973 aaPredicted RBP12.71□□□□□ -0.37
RACGAP1-201ENST00000312377 KNDC1Q76NI1 1749 aa12.71□□□□□ -0.37
RACGAP1-201ENST00000312377 LGR6Q9HBX8 967 aa12.71□□□□□ -0.38
RACGAP1-201ENST00000312377 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 ZCRB1Q8TBF4 217 aaKnown RBP12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 SPATA31A6Q5VVP1 1343 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 KCNQ2O43526 872 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 TEFQ10587 303 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 PTF1AQ7RTS3 328 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 WDR17Q8IZU2 1322 aa12.7□□□□□ -0.38
RACGAP1-201ENST00000312377 OVOS2A0A0J9YW53 1432 aa12.69□□□□□ -0.38
RACGAP1-201ENST00000312377 TRIM37O94972 964 aa12.69□□□□□ -0.38
RACGAP1-201ENST00000312377 OVOS2Q6IE36 1432 aa12.69□□□□□ -0.38
RACGAP1-201ENST00000312377 USP19O94966 1318 aa12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 EIF2S2P20042 333 aaKnown RBP12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 IRX6P78412 446 aaPredicted RBP12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 SSH2Q76I76 1423 aa12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
RACGAP1-201ENST00000312377 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
RACGAP1-201ENST00000312377 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
RACGAP1-201ENST00000312377 MSH5O43196 834 aa12.67□□□□□ -0.38
RACGAP1-201ENST00000312377 NSD2O96028 1365 aa12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 RGS17Q9UGC6 210 aaPredicted RBP12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 LRP6O75581 1613 aa12.66□□□□□ -0.38
RACGAP1-201ENST00000312377 ADGRB2O60241 1585 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 MYOM1P52179 1685 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 TMPOP42166 694 aaKnown RBP12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 CABP4P57796 275 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
RACGAP1-201ENST00000312377 INSRP06213 1382 aa12.65□□□□□ -0.39
RACGAP1-201ENST00000312377 CYP27B1O15528 508 aa12.64□□□□□ -0.39
RACGAP1-201ENST00000312377 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
RACGAP1-201ENST00000312377 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms