RNA–Protein interactions for RNA: ENST00000311895.7

ERCC4-201, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC4, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-201ENST00000311895 FILIP1Q7Z7B0 1213 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC191Q8NCU4 936 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 IGF1RP08069 1367 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 SYCE3A1L190 88 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 MCM4P33991 863 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 FKBP4Q02790 459 aaKnown RBP eCLIP10.11□□□□□ -0.79
ERCC4-201ENST00000311895 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 ATF7IPQ6VMQ6 1270 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 TXNDC2Q86VQ3 553 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 GAS2L2Q8NHY3 880 aa10.11□□□□□ -0.79
ERCC4-201ENST00000311895 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
ERCC4-201ENST00000311895 DCTN1Q14203 1278 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 AFAP1Q8N556 730 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 HIP1O00291 1037 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 TXLNAP40222 546 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 KIF6Q6ZMV9 814 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 PPFIBP1Q86W92 1011 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 JAKMIP1Q96N16 626 aaKnown RBP10.1□□□□□ -0.79
ERCC4-201ENST00000311895 TANGO6Q9C0B7 1094 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC158Q5M9N0 1113 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 KRT85P78386 507 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 CCAR1Q8IX12 1150 aaKnown RBP10.1□□□□□ -0.79
ERCC4-201ENST00000311895 PRDM10Q9NQV6 1147 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 AACSQ86V21 672 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 DEF6Q9H4E7 631 aa10.1□□□□□ -0.79
ERCC4-201ENST00000311895 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 RRS1Q15050 365 aaKnown RBP10.09□□□□□ -0.79
ERCC4-201ENST00000311895 PDRG1Q9NUG6 133 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 NEFHP12036 1026 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 DDX54Q8TDD1 881 aaKnown RBP10.09□□□□□ -0.79
ERCC4-201ENST00000311895 NCOA2Q15596 1464 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CUX1P39880 1505 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 ESPNB1AK53 854 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CCP110O43303 1012 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 NUTM1Q86Y26 1132 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 ERC1Q8IUD2 1116 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CDK19Q9BWU1 502 aa10.09□□□□□ -0.79
ERCC4-201ENST00000311895 SMARCA5O60264 1052 aaPredicted RBP10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
ERCC4-201ENST00000311895 ZNHIT6Q9NWK9 470 aaKnown RBP10.09□□□□□ -0.79
ERCC4-201ENST00000311895 CCDC69A6NI79 296 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 CCDC181Q5TID7 509 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 SYNJ1O43426 1573 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 SRGAP3O43295 1099 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 SYCP1Q15431 976 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
ERCC4-201ENST00000311895 C20orf194Q5TEA3 1177 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 TMEM57Q8N5G2 664 aa10.08□□□□□ -0.8
ERCC4-201ENST00000311895 ANKRD62A6NC57 917 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 FERMT3Q86UX7 667 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 MYO6Q9UM54 1294 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 CCT4P50991 539 aaKnown RBP10.07□□□□□ -0.8
ERCC4-201ENST00000311895 CASTP20810 708 aaKnown RBP10.07□□□□□ -0.8
ERCC4-201ENST00000311895 BLOC1S2Q6QNY1 142 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 NUP62CLQ9H1M0 184 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 TAX1BP1Q86VP1 789 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 EXOC6BQ9Y2D4 811 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 LRRFIP2Q9Y608 721 aaKnown RBP10.07□□□□□ -0.8
ERCC4-201ENST00000311895 THUMPD2Q9BTF0 503 aaKnown RBP10.07□□□□□ -0.8
ERCC4-201ENST00000311895 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
ERCC4-201ENST00000311895 ANKRD1Q15327 319 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 LARP6Q9BRS8 491 aaKnown RBP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 CFTRP13569 1480 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 JMYQ8N9B5 988 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 SRCIN1Q9C0H9 1055 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 SMG6Q86US8 1419 aaKnown RBP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 ARHGAP5Q13017 1502 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 SEPT11Q9NVA2 429 aaKnown RBP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 GOLGA6L10A6NI86 522 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 CBX1P83916 185 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
ERCC4-201ENST00000311895 SSBP05455 408 aaKnown RBP eCLIP10.06□□□□□ -0.8
ERCC4-201ENST00000311895 ENOX2Q16206 610 aaKnown RBP10.05□□□□□ -0.8
ERCC4-201ENST00000311895 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 WDR97A6NE52 1622 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 CCDC83Q8IWF9 413 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 UPF3BQ9BZI7 483 aaKnown RBP10.05□□□□□ -0.8
ERCC4-201ENST00000311895 CABP4P57796 275 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 PDCL3Q9H2J4 239 aa10.05□□□□□ -0.8
ERCC4-201ENST00000311895 KIAA0754O94854 1291 aa10.04□□□□□ -0.8
ERCC4-201ENST00000311895 TAF3Q5VWG9 929 aa10.04□□□□□ -0.8
ERCC4-201ENST00000311895 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
ERCC4-201ENST00000311895 ERLIN2O94905 339 aa10.03□□□□□ -0.8
ERCC4-201ENST00000311895 XPCQ01831 940 aaPredicted RBP10.03□□□□□ -0.8
ERCC4-201ENST00000311895 STIM1Q13586 685 aa10.03□□□□□ -0.8
ERCC4-201ENST00000311895 CCDC57Q2TAC2 916 aa10.03□□□□□ -0.8
ERCC4-201ENST00000311895 KRI1Q8N9T8 703 aaKnown RBP10.03□□□□□ -0.8
ERCC4-201ENST00000311895 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms