RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
VANGL1-201ENST00000310260 USP19O94966 1318 aa16.64■□□□□ 0.25
VANGL1-201ENST00000310260 AMPHP49418 695 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
VANGL1-201ENST00000310260 USP35Q9P2H5 1018 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 EMILIN1Q9Y6C2 1016 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 NSD2O96028 1365 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 C8orf37Q96NL8 207 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
VANGL1-201ENST00000310260 KIAA0232Q92628 1395 aa16.62■□□□□ 0.25
VANGL1-201ENST00000310260 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
VANGL1-201ENST00000310260 FAM83GA6ND36 823 aa16.62■□□□□ 0.25
VANGL1-201ENST00000310260 UBE2Q2Q8WVN8 375 aa16.62■□□□□ 0.25
VANGL1-201ENST00000310260 KIF20BQ96Q89 1820 aa16.62■□□□□ 0.25
VANGL1-201ENST00000310260 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
VANGL1-201ENST00000310260 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
VANGL1-201ENST00000310260 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
VANGL1-201ENST00000310260 MTHFSP49914 203 aa16.61■□□□□ 0.25
VANGL1-201ENST00000310260 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
VANGL1-201ENST00000310260 NEFMP07197 916 aa16.6■□□□□ 0.25
VANGL1-201ENST00000310260 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
VANGL1-201ENST00000310260 NPC1L1Q9UHC9 1359 aa16.6■□□□□ 0.25
VANGL1-201ENST00000310260 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
VANGL1-201ENST00000310260 RALBP1Q15311 655 aa16.59■□□□□ 0.25
VANGL1-201ENST00000310260 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
VANGL1-201ENST00000310260 LAS1LQ9Y4W2 734 aaKnown RBP16.58■□□□□ 0.25
VANGL1-201ENST00000310260 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
VANGL1-201ENST00000310260 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
VANGL1-201ENST00000310260 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
VANGL1-201ENST00000310260 EVA1CP58658 441 aa16.57■□□□□ 0.24
VANGL1-201ENST00000310260 BTG4Q9NY30 223 aa16.57■□□□□ 0.24
VANGL1-201ENST00000310260 PARD3Q8TEW0 1356 aa16.56■□□□□ 0.24
VANGL1-201ENST00000310260 MARF1Q9Y4F3 1742 aaKnown RBP16.55■□□□□ 0.24
VANGL1-201ENST00000310260 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
VANGL1-201ENST00000310260 LRP6O75581 1613 aa16.55■□□□□ 0.24
VANGL1-201ENST00000310260 SLIT3O75094 1523 aa16.55■□□□□ 0.24
VANGL1-201ENST00000310260 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
VANGL1-201ENST00000310260 HOXC9P31274 260 aa16.54■□□□□ 0.24
VANGL1-201ENST00000310260 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
VANGL1-201ENST00000310260 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
VANGL1-201ENST00000310260 IP6K1Q92551 441 aa16.54■□□□□ 0.24
VANGL1-201ENST00000310260 NFAT5O94916 1531 aa16.54■□□□□ 0.24
VANGL1-201ENST00000310260 CCDC9Q9Y3X0 531 aaKnown RBP16.53■□□□□ 0.24
VANGL1-201ENST00000310260 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
VANGL1-201ENST00000310260 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
VANGL1-201ENST00000310260 AATKQ6ZMQ8 1374 aa16.53■□□□□ 0.24
VANGL1-201ENST00000310260 TCERG1O14776 1098 aaKnown RBP16.52■□□□□ 0.23
VANGL1-201ENST00000310260 CPDO75976 1380 aa16.52■□□□□ 0.23
VANGL1-201ENST00000310260 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
VANGL1-201ENST00000310260 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
VANGL1-201ENST00000310260 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
VANGL1-201ENST00000310260 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
VANGL1-201ENST00000310260 AFF2P51816 1311 aa16.51■□□□□ 0.23
VANGL1-201ENST00000310260 USP21Q9UK80 565 aa16.5■□□□□ 0.23
VANGL1-201ENST00000310260 PDE4AP27815 886 aa16.5■□□□□ 0.23
VANGL1-201ENST00000310260 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
VANGL1-201ENST00000310260 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
VANGL1-201ENST00000310260 ABCA3Q99758 1704 aa16.5■□□□□ 0.23
VANGL1-201ENST00000310260 FLT4P35916 1363 aa16.49■□□□□ 0.23
VANGL1-201ENST00000310260 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
VANGL1-201ENST00000310260 CRYBG1Q9Y4K1 1723 aa16.49■□□□□ 0.23
VANGL1-201ENST00000310260 LARP1Q6PKG0 1096 aaKnown RBP16.49■□□□□ 0.23
VANGL1-201ENST00000310260 TOM1L2Q6ZVM7 507 aa16.49■□□□□ 0.23
VANGL1-201ENST00000310260 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
VANGL1-201ENST00000310260 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
VANGL1-201ENST00000310260 EIF4A2Q14240 407 aaKnown RBP16.48■□□□□ 0.23
VANGL1-201ENST00000310260 USHBP1Q8N6Y0 703 aa16.48■□□□□ 0.23
VANGL1-201ENST00000310260 DIAPH1O60610 1272 aaKnown RBP16.48■□□□□ 0.23
VANGL1-201ENST00000310260 LTN1O94822 1766 aa16.47■□□□□ 0.23
VANGL1-201ENST00000310260 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
VANGL1-201ENST00000310260 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
VANGL1-201ENST00000310260 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
VANGL1-201ENST00000310260 MS4A1P11836 297 aa16.45■□□□□ 0.22
VANGL1-201ENST00000310260 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
VANGL1-201ENST00000310260 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
VANGL1-201ENST00000310260 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
VANGL1-201ENST00000310260 INSRP06213 1382 aa16.45■□□□□ 0.22
VANGL1-201ENST00000310260 NBPF6Q5VWK0 638 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 NBPF4Q96M43 638 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 QTRT2Q9H974 415 aaKnown RBP16.44■□□□□ 0.22
VANGL1-201ENST00000310260 ERBB3P21860 1342 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 HMOX1P09601 288 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 U2AF1L5P0DN76 240 aaPredicted RBP16.44■□□□□ 0.22
VANGL1-201ENST00000310260 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
VANGL1-201ENST00000310260 GSE1Q14687 1217 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 RTL1A6NKG5 1358 aa16.44■□□□□ 0.22
VANGL1-201ENST00000310260 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
VANGL1-201ENST00000310260 IL13P35225 146 aa16.43■□□□□ 0.22
VANGL1-201ENST00000310260 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
VANGL1-201ENST00000310260 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
VANGL1-201ENST00000310260 EYA1Q99502 592 aa16.43■□□□□ 0.22
VANGL1-201ENST00000310260 WDR17Q8IZU2 1322 aa16.42■□□□□ 0.22
VANGL1-201ENST00000310260 A0A0G2JS52 829 aa16.42■□□□□ 0.22
VANGL1-201ENST00000310260 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
VANGL1-201ENST00000310260 COL14A1Q05707 1796 aaKnown RBP16.42■□□□□ 0.22
VANGL1-201ENST00000310260 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
VANGL1-201ENST00000310260 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
VANGL1-201ENST00000310260 WDR43Q15061 677 aaKnown RBP eCLIP16.42■□□□□ 0.22
VANGL1-201ENST00000310260 COL5A2P05997 1499 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms