RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 HAP1P54257 671 aaPredicted RBP20.63■□□□□ 0.89
PIKFYVE-202ENST00000308862 ZC3H6P61129 1189 aaKnown RBP20.63■□□□□ 0.89
PIKFYVE-202ENST00000308862 HSP90AB2PQ58FF8 381 aa20.63■□□□□ 0.89
PIKFYVE-202ENST00000308862 CPDO75976 1380 aa20.63■□□□□ 0.89
PIKFYVE-202ENST00000308862 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
PIKFYVE-202ENST00000308862 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
PIKFYVE-202ENST00000308862 RGPD1P0DJD0 1748 aa20.62■□□□□ 0.89
PIKFYVE-202ENST00000308862 KIAA0232Q92628 1395 aa20.61■□□□□ 0.89
PIKFYVE-202ENST00000308862 COL18A1P39060 1754 aa20.61■□□□□ 0.89
PIKFYVE-202ENST00000308862 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 ADAMTS8Q9UP79 889 aa20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 RGPD5Q99666 1765 aa20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 IL13P35225 146 aa20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 EIF4A2Q14240 407 aaKnown RBP20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 IP6K1Q92551 441 aa20.6■□□□□ 0.89
PIKFYVE-202ENST00000308862 LMO7Q8WWI1 1683 aa20.59■□□□□ 0.89
PIKFYVE-202ENST00000308862 U2AF1L5P0DN76 240 aaPredicted RBP20.58■□□□□ 0.89
PIKFYVE-202ENST00000308862 U2AF1Q01081 240 aaKnown RBP eCLIP20.58■□□□□ 0.893e-7■■■□□ 17.8
PIKFYVE-202ENST00000308862 JCADQ9P266 1359 aa20.57■□□□□ 0.88
PIKFYVE-202ENST00000308862 FAM208AQ9UK61 1670 aaKnown RBP20.56■□□□□ 0.88
PIKFYVE-202ENST00000308862 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
PIKFYVE-202ENST00000308862 PRDM11Q9NQV5 511 aa20.55■□□□□ 0.88
PIKFYVE-202ENST00000308862 COL14A1Q05707 1796 aaKnown RBP20.55■□□□□ 0.88
PIKFYVE-202ENST00000308862 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.88
PIKFYVE-202ENST00000308862 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
PIKFYVE-202ENST00000308862 HSPA1LP34931 641 aa20.53■□□□□ 0.88
PIKFYVE-202ENST00000308862 LTV1Q96GA3 475 aaPredicted RBP20.53■□□□□ 0.88
PIKFYVE-202ENST00000308862 RGPD2P0DJD1 1756 aa20.53■□□□□ 0.88
PIKFYVE-202ENST00000308862 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
PIKFYVE-202ENST00000308862 CCDC146Q8IYE0 955 aa20.52■□□□□ 0.88
PIKFYVE-202ENST00000308862 PLCH1Q4KWH8 1693 aa20.52■□□□□ 0.87
PIKFYVE-202ENST00000308862 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
PIKFYVE-202ENST00000308862 ANKRD24Q8TF21 1146 aa20.51■□□□□ 0.87
PIKFYVE-202ENST00000308862 ERBB3P21860 1342 aa20.51■□□□□ 0.87
PIKFYVE-202ENST00000308862 HMOX1P09601 288 aa20.5■□□□□ 0.87
PIKFYVE-202ENST00000308862 RSPH6AQ9H0K4 717 aa20.49■□□□□ 0.87
PIKFYVE-202ENST00000308862 COL5A2P05997 1499 aaPredicted RBP20.49■□□□□ 0.87
PIKFYVE-202ENST00000308862 EYA1Q99502 592 aa20.49■□□□□ 0.87
PIKFYVE-202ENST00000308862 NUTM2BA6NNL0 878 aaPredicted RBP20.48■□□□□ 0.87
PIKFYVE-202ENST00000308862 NUTM2EB1AL46 878 aaPredicted RBP20.48■□□□□ 0.87
PIKFYVE-202ENST00000308862 FCHSD2O94868 740 aa20.48■□□□□ 0.87
PIKFYVE-202ENST00000308862 NUTM2AQ8IVF1 878 aaPredicted RBP20.48■□□□□ 0.87
PIKFYVE-202ENST00000308862 RUNDC1Q96C34 613 aa20.48■□□□□ 0.87
PIKFYVE-202ENST00000308862 KDRP35968 1356 aa20.47■□□□□ 0.87
PIKFYVE-202ENST00000308862 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
PIKFYVE-202ENST00000308862 AEBP1Q8IUX7 1158 aa20.47■□□□□ 0.87
PIKFYVE-202ENST00000308862 NCAPD2Q15021 1401 aa20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 FAM83GA6ND36 823 aa20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 PRKAR2BP31323 418 aa20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 SPATA31A6Q5VVP1 1343 aa20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 MAPK8IP3Q9UPT6 1336 aa20.46■□□□□ 0.87
PIKFYVE-202ENST00000308862 SENP3-EIF4A1A0A087X0R7 540 aa20.45■□□□□ 0.87
PIKFYVE-202ENST00000308862 ADAMTS2O95450 1211 aa20.45■□□□□ 0.87
PIKFYVE-202ENST00000308862 PLEKHF1Q96S99 279 aa20.45■□□□□ 0.87
PIKFYVE-202ENST00000308862 LRP6O75581 1613 aa20.45■□□□□ 0.86
PIKFYVE-202ENST00000308862 NRAPQ86VF7 1730 aa20.45■□□□□ 0.86
PIKFYVE-202ENST00000308862 CSB-PGBD3P0DP91 1061 aa20.44■□□□□ 0.86
PIKFYVE-202ENST00000308862 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
PIKFYVE-202ENST00000308862 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
PIKFYVE-202ENST00000308862 NWD2Q9ULI1 1742 aa20.44■□□□□ 0.86
PIKFYVE-202ENST00000308862 APAF1O14727 1248 aa20.43■□□□□ 0.86
PIKFYVE-202ENST00000308862 USHBP1Q8N6Y0 703 aa20.43■□□□□ 0.86
PIKFYVE-202ENST00000308862 ZBED9Q6R2W3 1325 aa20.43■□□□□ 0.86
PIKFYVE-202ENST00000308862 NEFMP07197 916 aa20.42■□□□□ 0.86
PIKFYVE-202ENST00000308862 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
PIKFYVE-202ENST00000308862 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
PIKFYVE-202ENST00000308862 NLRP2Q9NX02 1062 aa20.41■□□□□ 0.86
PIKFYVE-202ENST00000308862 BTG4Q9NY30 223 aa20.41■□□□□ 0.86
PIKFYVE-202ENST00000308862 STRN4Q9NRL3 753 aa20.39■□□□□ 0.86
PIKFYVE-202ENST00000308862 SALL2Q9Y467 1007 aaPredicted RBP20.39■□□□□ 0.86
PIKFYVE-202ENST00000308862 SLIT2O94813 1529 aa20.38■□□□□ 0.85
PIKFYVE-202ENST00000308862 PHACTR3Q96KR7 559 aa20.38■□□□□ 0.85
PIKFYVE-202ENST00000308862 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
PIKFYVE-202ENST00000308862 CRB1P82279 1406 aa20.37■□□□□ 0.85
PIKFYVE-202ENST00000308862 EVA1CP58658 441 aa20.37■□□□□ 0.85
PIKFYVE-202ENST00000308862 PARP4Q9UKK3 1724 aaKnown RBP20.37■□□□□ 0.85
PIKFYVE-202ENST00000308862 DLG5Q8TDM6 1919 aa20.36■□□□□ 0.85
PIKFYVE-202ENST00000308862 TOM1L2Q6ZVM7 507 aa20.36■□□□□ 0.85
PIKFYVE-202ENST00000308862 TMPOP42166 694 aaKnown RBP20.35■□□□□ 0.85
PIKFYVE-202ENST00000308862 NEUROD2Q15784 382 aa20.35■□□□□ 0.85
PIKFYVE-202ENST00000308862 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
PIKFYVE-202ENST00000308862 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
PIKFYVE-202ENST00000308862 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
PIKFYVE-202ENST00000308862 MEGF6O75095 1541 aa20.34■□□□□ 0.85
PIKFYVE-202ENST00000308862 WNK3Q9BYP7 1800 aa20.34■□□□□ 0.85
PIKFYVE-202ENST00000308862 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.34■□□□□ 0.85
PIKFYVE-202ENST00000308862 NFE2L2Q16236 605 aa20.34■□□□□ 0.85
PIKFYVE-202ENST00000308862 MEX3CQ5U5Q3 659 aaKnown RBP20.33■□□□□ 0.84
PIKFYVE-202ENST00000308862 CARD10Q9BWT7 1032 aa20.33■□□□□ 0.84
PIKFYVE-202ENST00000308862 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
PIKFYVE-202ENST00000308862 NCBP3Q53F19 620 aaKnown RBP20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 RAPGEF4Q8WZA2 1011 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 ZNF521Q96K83 1311 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 CENPBP07199 599 aaPredicted RBP20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 RIPK4P57078 832 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
PIKFYVE-202ENST00000308862 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms