RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 WNK3Q9BYP7 1800 aa27.93■■■□□ 2.06
PDZRN3-202ENST00000308537 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
PDZRN3-202ENST00000308537 TCP11L2Q8N4U5 519 aa27.93■■■□□ 2.06
PDZRN3-202ENST00000308537 TNS1Q9HBL0 1735 aaKnown RBP27.92■■■□□ 2.06
PDZRN3-202ENST00000308537 LTN1O94822 1766 aa27.91■■■□□ 2.06
PDZRN3-202ENST00000308537 SLC24A1O60721 1099 aa27.91■■■□□ 2.06
PDZRN3-202ENST00000308537 DEFB132Q7Z7B7 95 aa27.91■■■□□ 2.06
PDZRN3-202ENST00000308537 TERF2IPQ9NYB0 399 aa27.91■■■□□ 2.06
PDZRN3-202ENST00000308537 RGPD1P0DJD0 1748 aa27.9■■■□□ 2.06
PDZRN3-202ENST00000308537 ZBTB7CA1YPR0 619 aa27.9■■■□□ 2.06
PDZRN3-202ENST00000308537 THRAP3Q9Y2W1 955 aaKnown RBP27.9■■■□□ 2.06
PDZRN3-202ENST00000308537 MYOM1P52179 1685 aa27.9■■■□□ 2.06
PDZRN3-202ENST00000308537 SOX12O15370 315 aa27.89■■■□□ 2.06
PDZRN3-202ENST00000308537 WDR17Q8IZU2 1322 aa27.89■■■□□ 2.05
PDZRN3-202ENST00000308537 ANKRD36BQ8N2N9 1353 aa27.88■■■□□ 2.05
PDZRN3-202ENST00000308537 LRRC37A3O60309 1634 aa27.88■■■□□ 2.05
PDZRN3-202ENST00000308537 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
PDZRN3-202ENST00000308537 TMF1P82094 1093 aa27.86■■■□□ 2.05
PDZRN3-202ENST00000308537 PEAK1Q9H792 1746 aa27.86■■■□□ 2.05
PDZRN3-202ENST00000308537 DISP2A7MBM2 1401 aa27.84■■■□□ 2.05
PDZRN3-202ENST00000308537 CCER1Q8TC90 406 aaPredicted RBP27.82■■■□□ 2.04
PDZRN3-202ENST00000308537 TOM1L2Q6ZVM7 507 aa27.8■■■□□ 2.04
PDZRN3-202ENST00000308537 ERBB3P21860 1342 aa27.78■■■□□ 2.04
PDZRN3-202ENST00000308537 FAM196AQ6ZSG2 479 aa27.78■■■□□ 2.04
PDZRN3-202ENST00000308537 CARD10Q9BWT7 1032 aa27.78■■■□□ 2.04
PDZRN3-202ENST00000308537 SF3B2Q13435 895 aaKnown RBP27.77■■■□□ 2.04
PDZRN3-202ENST00000308537 SBF2Q86WG5 1849 aa27.76■■■□□ 2.04
PDZRN3-202ENST00000308537 PDE3BQ13370 1112 aa27.75■■■□□ 2.03
PDZRN3-202ENST00000308537 KIF20BQ96Q89 1820 aa27.74■■■□□ 2.03
PDZRN3-202ENST00000308537 FYB1O15117 783 aa27.74■■■□□ 2.03
PDZRN3-202ENST00000308537 TRIM37O94972 964 aa27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 FBLN1P23142 703 aa27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 BAG6P46379 1132 aa27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 EN1Q05925 392 aaPredicted RBP27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 CDCA8Q53HL2 280 aa27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 CARD14Q9BXL6 1004 aa27.73■■■□□ 2.03
PDZRN3-202ENST00000308537 CCDC7Q96M83 1385 aa27.72■■■□□ 2.03
PDZRN3-202ENST00000308537 MAP3K19Q56UN5 1328 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 RREB1Q92766 1687 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 OVOS2A0A0G2JMS6 1433 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 CSB-PGBD3P0DP91 1061 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 DDB1Q16531 1140 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 IP6K1Q92551 441 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 COG3Q96JB2 828 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 CAMKK2Q96RR4 588 aa27.69■■■□□ 2.02
PDZRN3-202ENST00000308537 BCL9O00512 1426 aa27.68■■■□□ 2.02
PDZRN3-202ENST00000308537 MARCH10Q8NA82 808 aaPredicted RBP27.68■■■□□ 2.02
PDZRN3-202ENST00000308537 CDCA7Q9BWT1 371 aaPredicted RBP27.68■■■□□ 2.02
PDZRN3-202ENST00000308537 FAM208AQ9UK61 1670 aaKnown RBP27.68■■■□□ 2.02
PDZRN3-202ENST00000308537 ANKRD24Q8TF21 1146 aa27.67■■■□□ 2.02
PDZRN3-202ENST00000308537 GGNBP2Q9H3C7 697 aa27.67■■■□□ 2.02
PDZRN3-202ENST00000308537 HSPA5P11021 654 aaKnown RBP27.66■■■□□ 2.02
PDZRN3-202ENST00000308537 TNS2Q63HR2 1409 aa27.66■■■□□ 2.02
PDZRN3-202ENST00000308537 RGPD2P0DJD1 1756 aa27.65■■■□□ 2.02
PDZRN3-202ENST00000308537 EZH2Q15910 746 aaKnown RBP27.65■■■□□ 2.02
PDZRN3-202ENST00000308537 NSD3Q9BZ95 1437 aa27.65■■■□□ 2.02
PDZRN3-202ENST00000308537 HOXC9P31274 260 aa27.63■■■□□ 2.01
PDZRN3-202ENST00000308537 EIF4G2P78344 907 aaKnown RBP eCLIP27.63■■■□□ 2.01
PDZRN3-202ENST00000308537 NUP188Q5SRE5 1749 aa27.63■■■□□ 2.01
PDZRN3-202ENST00000308537 PTF1AQ7RTS3 328 aa27.62■■■□□ 2.01
PDZRN3-202ENST00000308537 RGPD3A6NKT7 1758 aaPredicted RBP27.61■■■□□ 2.01
PDZRN3-202ENST00000308537 RGPD4Q7Z3J3 1758 aa27.61■■■□□ 2.01
PDZRN3-202ENST00000308537 APBA3O96018 575 aa27.61■■■□□ 2.01
PDZRN3-202ENST00000308537 NLRP2Q9NX02 1062 aa27.61■■■□□ 2.01
PDZRN3-202ENST00000308537 RTL1A6NKG5 1358 aa27.6■■■□□ 2.01
PDZRN3-202ENST00000308537 PARD3Q8TEW0 1356 aa27.6■■■□□ 2.01
PDZRN3-202ENST00000308537 C11orf95C9JLR9 678 aaPredicted RBP27.6■■■□□ 2.01
PDZRN3-202ENST00000308537 RRS1Q15050 365 aaKnown RBP27.6■■■□□ 2.01
PDZRN3-202ENST00000308537 ANKRD26Q9UPS8 1709 aa27.58■■■□□ 2.01
PDZRN3-202ENST00000308537 EXOC5O00471 708 aa27.56■■■□□ 2
PDZRN3-202ENST00000308537 SHANK3Q9BYB0 1731 aa27.55■■■□□ 2
PDZRN3-202ENST00000308537 IL2RBP14784 551 aa27.55■■■□□ 2
PDZRN3-202ENST00000308537 LTV1Q96GA3 475 aaPredicted RBP27.54■■■□□ 2
PDZRN3-202ENST00000308537 NHSQ6T4R5 1651 aa27.53■■■□□ 2
PDZRN3-202ENST00000308537 PSDA5PKW4 1024 aaPredicted RBP27.53■■■□□ 2
PDZRN3-202ENST00000308537 AMPHP49418 695 aa27.53■■■□□ 2
PDZRN3-202ENST00000308537 BCL11BQ9C0K0 894 aaPredicted RBP27.52■■■□□ 2
PDZRN3-202ENST00000308537 LRP5O75197 1615 aa27.52■■■□□ 2
PDZRN3-202ENST00000308537 KIF24Q5T7B8 1368 aa27.51■■□□□ 1.99
PDZRN3-202ENST00000308537 MEGF6O75095 1541 aa27.51■■□□□ 1.99
PDZRN3-202ENST00000308537 INSRP06213 1382 aa27.5■■□□□ 1.99
PDZRN3-202ENST00000308537 MAP2P11137 1827 aaKnown RBP27.5■■□□□ 1.99
PDZRN3-202ENST00000308537 PLSCR1O15162 318 aa27.49■■□□□ 1.99
PDZRN3-202ENST00000308537 HSP90AB2PQ58FF8 381 aa27.49■■□□□ 1.99
PDZRN3-202ENST00000308537 FLT4P35916 1363 aa27.48■■□□□ 1.99
PDZRN3-202ENST00000308537 NBPF6Q5VWK0 638 aa27.48■■□□□ 1.99
PDZRN3-202ENST00000308537 NBPF4Q96M43 638 aa27.48■■□□□ 1.99
PDZRN3-202ENST00000308537 R3HDM1Q15032 1099 aaKnown RBP27.47■■□□□ 1.99
PDZRN3-202ENST00000308537 PROM2Q8N271 834 aa27.47■■□□□ 1.99
PDZRN3-202ENST00000308537 EMILIN1Q9Y6C2 1016 aa27.47■■□□□ 1.99
PDZRN3-202ENST00000308537 CGNL1Q0VF96 1302 aa27.46■■□□□ 1.99
PDZRN3-202ENST00000308537 KCNQ2O43526 872 aa27.46■■□□□ 1.99
PDZRN3-202ENST00000308537 POLR3GLQ9BT43 218 aa27.46■■□□□ 1.99
PDZRN3-202ENST00000308537 NCAPD2Q15021 1401 aa27.44■■□□□ 1.98
PDZRN3-202ENST00000308537 PANK3Q9H999 370 aa27.44■■□□□ 1.98
PDZRN3-202ENST00000308537 BTAF1O14981 1849 aa27.44■■□□□ 1.98
PDZRN3-202ENST00000308537 KAT6BQ8WYB5 2073 aa27.4■■□□□ 1.98
PDZRN3-202ENST00000308537 USHBP1Q8N6Y0 703 aa27.4■■□□□ 1.98
PDZRN3-202ENST00000308537 ACSBG1Q96GR2 724 aa27.39■■□□□ 1.98
PDZRN3-202ENST00000308537 POLKQ9UBT6 870 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms