RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 CRB1P82279 1406 aa23.87■■□□□ 1.41
HMGCLL1-202ENST00000308161 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
HMGCLL1-202ENST00000308161 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
HMGCLL1-202ENST00000308161 NFAT5O94916 1531 aa23.86■■□□□ 1.41
HMGCLL1-202ENST00000308161 NINLQ9Y2I6 1382 aa23.86■■□□□ 1.41
HMGCLL1-202ENST00000308161 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
HMGCLL1-202ENST00000308161 COL18A1P39060 1754 aa23.85■■□□□ 1.41
HMGCLL1-202ENST00000308161 THRAP3Q9Y2W1 955 aaKnown RBP23.84■■□□□ 1.41
HMGCLL1-202ENST00000308161 BAG6P46379 1132 aa23.83■■□□□ 1.4
HMGCLL1-202ENST00000308161 WDR17Q8IZU2 1322 aa23.82■■□□□ 1.4
HMGCLL1-202ENST00000308161 RGPD5Q99666 1765 aa23.81■■□□□ 1.4
HMGCLL1-202ENST00000308161 FAM196AQ6ZSG2 479 aa23.8■■□□□ 1.4
HMGCLL1-202ENST00000308161 USP54Q70EL1 1684 aa23.79■■□□□ 1.4
HMGCLL1-202ENST00000308161 ANKRD36BQ8N2N9 1353 aa23.79■■□□□ 1.4
HMGCLL1-202ENST00000308161 TRIM37O94972 964 aa23.79■■□□□ 1.4
HMGCLL1-202ENST00000308161 CDCA8Q53HL2 280 aa23.79■■□□□ 1.4
HMGCLL1-202ENST00000308161 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
HMGCLL1-202ENST00000308161 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
HMGCLL1-202ENST00000308161 RGPD1P0DJD0 1748 aa23.78■■□□□ 1.4
HMGCLL1-202ENST00000308161 EN1Q05925 392 aaPredicted RBP23.77■■□□□ 1.4
HMGCLL1-202ENST00000308161 COG3Q96JB2 828 aa23.77■■□□□ 1.4
HMGCLL1-202ENST00000308161 LTN1O94822 1766 aa23.76■■□□□ 1.39
HMGCLL1-202ENST00000308161 PARP4Q9UKK3 1724 aaKnown RBP23.76■■□□□ 1.39
HMGCLL1-202ENST00000308161 DDB1Q16531 1140 aa23.75■■□□□ 1.39
HMGCLL1-202ENST00000308161 POLR3GLQ9BT43 218 aa23.75■■□□□ 1.39
HMGCLL1-202ENST00000308161 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
HMGCLL1-202ENST00000308161 ABCC6O95255 1503 aa23.73■■□□□ 1.39
HMGCLL1-202ENST00000308161 NLRP2Q9NX02 1062 aa23.73■■□□□ 1.39
HMGCLL1-202ENST00000308161 LRRC37A3O60309 1634 aa23.72■■□□□ 1.39
HMGCLL1-202ENST00000308161 TNS1Q9HBL0 1735 aaKnown RBP23.72■■□□□ 1.39
HMGCLL1-202ENST00000308161 APBA3O96018 575 aa23.71■■□□□ 1.39
HMGCLL1-202ENST00000308161 ANKRD24Q8TF21 1146 aa23.71■■□□□ 1.39
HMGCLL1-202ENST00000308161 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
HMGCLL1-202ENST00000308161 ERBB3P21860 1342 aa23.7■■□□□ 1.39
HMGCLL1-202ENST00000308161 FBLN1P23142 703 aa23.7■■□□□ 1.38
HMGCLL1-202ENST00000308161 LTV1Q96GA3 475 aaPredicted RBP23.7■■□□□ 1.38
HMGCLL1-202ENST00000308161 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
HMGCLL1-202ENST00000308161 SRCAPQ6ZRS2 3230 aa23.69■■□□□ 1.38
HMGCLL1-202ENST00000308161 CDCA7Q9BWT1 371 aaPredicted RBP23.69■■□□□ 1.38
HMGCLL1-202ENST00000308161 CCDC7Q96M83 1385 aa23.69■■□□□ 1.38
HMGCLL1-202ENST00000308161 OVOS2A0A0G2JMS6 1433 aa23.69■■□□□ 1.38
HMGCLL1-202ENST00000308161 EZH2Q15910 746 aaKnown RBP23.68■■□□□ 1.38
HMGCLL1-202ENST00000308161 FYB1O15117 783 aa23.67■■□□□ 1.38
HMGCLL1-202ENST00000308161 EIF4G2P78344 907 aaKnown RBP eCLIP23.67■■□□□ 1.38
HMGCLL1-202ENST00000308161 PSDA5PKW4 1024 aaPredicted RBP23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 AMPHP49418 695 aa23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 DISP2A7MBM2 1401 aa23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 MYOM1P52179 1685 aa23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
HMGCLL1-202ENST00000308161 IP6K1Q92551 441 aa23.65■■□□□ 1.38
HMGCLL1-202ENST00000308161 EXOC5O00471 708 aa23.64■■□□□ 1.38
HMGCLL1-202ENST00000308161 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.38
HMGCLL1-202ENST00000308161 NSD3Q9BZ95 1437 aa23.64■■□□□ 1.38
HMGCLL1-202ENST00000308161 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
HMGCLL1-202ENST00000308161 C11orf95C9JLR9 678 aaPredicted RBP23.62■■□□□ 1.37
HMGCLL1-202ENST00000308161 CAMKK2Q96RR4 588 aa23.62■■□□□ 1.37
HMGCLL1-202ENST00000308161 CARD14Q9BXL6 1004 aa23.62■■□□□ 1.37
HMGCLL1-202ENST00000308161 KIF20BQ96Q89 1820 aa23.62■■□□□ 1.37
HMGCLL1-202ENST00000308161 HOXC9P31274 260 aa23.61■■□□□ 1.37
HMGCLL1-202ENST00000308161 PEAK1Q9H792 1746 aa23.61■■□□□ 1.37
HMGCLL1-202ENST00000308161 IL2RBP14784 551 aa23.6■■□□□ 1.37
HMGCLL1-202ENST00000308161 TNS2Q63HR2 1409 aa23.6■■□□□ 1.37
HMGCLL1-202ENST00000308161 R3HDM1Q15032 1099 aaKnown RBP23.59■■□□□ 1.37
HMGCLL1-202ENST00000308161 PTF1AQ7RTS3 328 aa23.57■■□□□ 1.36
HMGCLL1-202ENST00000308161 PARD3Q8TEW0 1356 aa23.57■■□□□ 1.36
HMGCLL1-202ENST00000308161 SBF2Q86WG5 1849 aa23.55■■□□□ 1.36
HMGCLL1-202ENST00000308161 RTL1A6NKG5 1358 aa23.55■■□□□ 1.36
HMGCLL1-202ENST00000308161 BCL11BQ9C0K0 894 aaPredicted RBP23.55■■□□□ 1.36
HMGCLL1-202ENST00000308161 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
HMGCLL1-202ENST00000308161 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
HMGCLL1-202ENST00000308161 ACSBG1Q96GR2 724 aa23.53■■□□□ 1.36
HMGCLL1-202ENST00000308161 SMG6Q86US8 1419 aaKnown RBP23.51■■□□□ 1.35
HMGCLL1-202ENST00000308161 RREB1Q92766 1687 aa23.51■■□□□ 1.35
HMGCLL1-202ENST00000308161 PPM1GO15355 546 aaPredicted RBP23.51■■□□□ 1.35
HMGCLL1-202ENST00000308161 HSP90AB2PQ58FF8 381 aa23.51■■□□□ 1.35
HMGCLL1-202ENST00000308161 USHBP1Q8N6Y0 703 aa23.51■■□□□ 1.35
HMGCLL1-202ENST00000308161 BCL9O00512 1426 aa23.5■■□□□ 1.35
HMGCLL1-202ENST00000308161 RGPD2P0DJD1 1756 aa23.5■■□□□ 1.35
HMGCLL1-202ENST00000308161 DDX54Q8TDD1 881 aaKnown RBP23.5■■□□□ 1.35
HMGCLL1-202ENST00000308161 EMILIN1Q9Y6C2 1016 aa23.5■■□□□ 1.35
HMGCLL1-202ENST00000308161 NUP188Q5SRE5 1749 aa23.49■■□□□ 1.35
HMGCLL1-202ENST00000308161 KCNQ2O43526 872 aa23.49■■□□□ 1.35
HMGCLL1-202ENST00000308161 NBPF14Q5TI25 921 aa23.49■■□□□ 1.35
HMGCLL1-202ENST00000308161 FLT4P35916 1363 aa23.48■■□□□ 1.35
HMGCLL1-202ENST00000308161 NBPF6Q5VWK0 638 aa23.48■■□□□ 1.35
HMGCLL1-202ENST00000308161 NBPF4Q96M43 638 aa23.48■■□□□ 1.35
HMGCLL1-202ENST00000308161 PANK3Q9H999 370 aa23.48■■□□□ 1.35
HMGCLL1-202ENST00000308161 TNNT2P45379 298 aaPredicted RBP23.47■■□□□ 1.35
HMGCLL1-202ENST00000308161 PLSCR1O15162 318 aa23.46■■□□□ 1.35
HMGCLL1-202ENST00000308161 INSRP06213 1382 aa23.46■■□□□ 1.35
HMGCLL1-202ENST00000308161 MEGF6O75095 1541 aa23.45■■□□□ 1.34
HMGCLL1-202ENST00000308161 NHSQ6T4R5 1651 aa23.43■■□□□ 1.34
HMGCLL1-202ENST00000308161 KIF24Q5T7B8 1368 aa23.43■■□□□ 1.34
HMGCLL1-202ENST00000308161 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
HMGCLL1-202ENST00000308161 KAT6BQ8WYB5 2073 aa23.43■■□□□ 1.34
HMGCLL1-202ENST00000308161 ZCRB1Q8TBF4 217 aaKnown RBP23.42■■□□□ 1.34
HMGCLL1-202ENST00000308161 RGPD3A6NKT7 1758 aaPredicted RBP23.42■■□□□ 1.34
HMGCLL1-202ENST00000308161 RGPD4Q7Z3J3 1758 aa23.42■■□□□ 1.34
HMGCLL1-202ENST00000308161 TXNRD1Q16881 649 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms