RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 TNNT1P13805 278 aa16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 INCENPQ9NQS7 918 aa16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 GTF2F1P35269 517 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 PIBF1Q8WXW3 757 aa16.88■□□□□ 0.29
CHRNA7-201ENST00000306901 DACH1Q9UI36 760 aa16.87■□□□□ 0.29
CHRNA7-201ENST00000306901 RNF187Q5TA31 235 aaPredicted RBP16.87■□□□□ 0.29
CHRNA7-201ENST00000306901 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
CHRNA7-201ENST00000306901 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 PPP4R3BQ5MIZ7 849 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 MTHFSP49914 203 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 PSME1Q06323 249 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 CASQ1P31415 396 aa16.86■□□□□ 0.29
CHRNA7-201ENST00000306901 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 PDRG1Q9NUG6 133 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 DNA2P51530 1060 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 MAP2K1Q02750 393 aaPredicted RBP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 EPB41L2O43491 1005 aaKnown RBP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 DDX11Q96FC9 970 aa16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
CHRNA7-201ENST00000306901 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 GBP2P32456 591 aaPredicted RBP16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 PTPN14Q15678 1187 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 RAPGEF2Q9Y4G8 1499 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 CCDC69A6NI79 296 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 GNAI2P04899 355 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 AAMPQ13685 434 aa16.84■□□□□ 0.29
CHRNA7-201ENST00000306901 URI1O94763 535 aaPredicted RBP16.83■□□□□ 0.29
CHRNA7-201ENST00000306901 STIM1Q13586 685 aa16.83■□□□□ 0.29
CHRNA7-201ENST00000306901 JMYQ8N9B5 988 aa16.83■□□□□ 0.29
CHRNA7-201ENST00000306901 CRACR2AQ9BSW2 395 aa16.83■□□□□ 0.29
CHRNA7-201ENST00000306901 CEP57L1Q8IYX8 460 aa16.83■□□□□ 0.28
CHRNA7-201ENST00000306901 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHRNA7-201ENST00000306901 ARHGAP29Q52LW3 1261 aa16.83■□□□□ 0.28
CHRNA7-201ENST00000306901 SSR1P43307 286 aaKnown RBP16.83■□□□□ 0.28
CHRNA7-201ENST00000306901 CCDC30Q5VVM6 783 aa16.83■□□□□ 0.28
CHRNA7-201ENST00000306901 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 CCDC148Q8NFR7 591 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 HIP1O00291 1037 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 GNAI3P08754 354 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 PPP2R1AP30153 589 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 FERMT3Q86UX7 667 aa16.82■□□□□ 0.28
CHRNA7-201ENST00000306901 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 EIF5P55010 431 aaKnown RBP16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 MAP3K11Q16584 847 aa16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 C16orf45Q96MC5 204 aaPredicted RBP16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 PRKAR2BP31323 418 aa16.81■□□□□ 0.28
CHRNA7-201ENST00000306901 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
CHRNA7-201ENST00000306901 RSPH4AQ5TD94 716 aa16.8■□□□□ 0.28
CHRNA7-201ENST00000306901 TMEM132EQ6IEE7 984 aa16.8■□□□□ 0.28
CHRNA7-201ENST00000306901 TAF4BQ92750 862 aa16.8■□□□□ 0.28
CHRNA7-201ENST00000306901 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
CHRNA7-201ENST00000306901 DDX54Q8TDD1 881 aaKnown RBP16.79■□□□□ 0.28
CHRNA7-201ENST00000306901 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
CHRNA7-201ENST00000306901 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
CHRNA7-201ENST00000306901 CNNM1Q9NRU3 951 aa16.79■□□□□ 0.28
CHRNA7-201ENST00000306901 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 NF2P35240 595 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 NLRP2Q9NX02 1062 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 CLIP2Q9UDT6 1046 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 CCDC158Q5M9N0 1113 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 IL1RAPL2Q9NP60 686 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
CHRNA7-201ENST00000306901 UBE4AQ14139 1066 aa16.77■□□□□ 0.28
CHRNA7-201ENST00000306901 KLHL10Q6JEL2 608 aa16.77■□□□□ 0.28
CHRNA7-201ENST00000306901 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 FKBP4Q02790 459 aaKnown RBP eCLIP16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 DHX8Q14562 1220 aaKnown RBP16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 CCDC184Q52MB2 194 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 BLOC1S2Q6QNY1 142 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 CPLX3Q8WVH0 158 aa16.77■□□□□ 0.27
CHRNA7-201ENST00000306901 SSFA2P28290 1259 aa16.76■□□□□ 0.27
CHRNA7-201ENST00000306901 LARP6Q9BRS8 491 aaKnown RBP16.76■□□□□ 0.27
CHRNA7-201ENST00000306901 AACSQ86V21 672 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms