RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 TOM1L2Q6ZVM7 507 aa29.15■■■□□ 2.26
RER1-201ENST00000306256 SBF2Q86WG5 1849 aa29.15■■■□□ 2.26
RER1-201ENST00000306256 PEAK1Q9H792 1746 aa29.14■■■□□ 2.26
RER1-201ENST00000306256 R3HDM1Q15032 1099 aaKnown RBP29.14■■■□□ 2.26
RER1-201ENST00000306256 ARHGEF25Q86VW2 580 aa29.14■■■□□ 2.26
RER1-201ENST00000306256 KCNH5Q8NCM2 988 aa29.14■■■□□ 2.26
RER1-201ENST00000306256 CD163L1Q9NR16 1453 aa29.13■■■□□ 2.25
RER1-201ENST00000306256 NUP188Q5SRE5 1749 aa29.13■■■□□ 2.25
RER1-201ENST00000306256 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.12■■■□□ 2.25
RER1-201ENST00000306256 WDR17Q8IZU2 1322 aa29.12■■■□□ 2.25
RER1-201ENST00000306256 USP54Q70EL1 1684 aa29.12■■■□□ 2.25
RER1-201ENST00000306256 TMC1Q8TDI8 760 aa29.1■■■□□ 2.25
RER1-201ENST00000306256 LTN1O94822 1766 aa29.09■■■□□ 2.25
RER1-201ENST00000306256 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
RER1-201ENST00000306256 OVOS2A0A0G2JMS6 1433 aa29.08■■■□□ 2.25
RER1-201ENST00000306256 OVOS2A0A0J9YW53 1432 aa29.08■■■□□ 2.25
RER1-201ENST00000306256 OVOS2Q6IE36 1432 aa29.08■■■□□ 2.25
RER1-201ENST00000306256 NME9Q86XW9 330 aa29.07■■■□□ 2.24
RER1-201ENST00000306256 CSB-PGBD3P0DP91 1061 aa29.06■■■□□ 2.24
RER1-201ENST00000306256 DDB1Q16531 1140 aa29.06■■■□□ 2.24
RER1-201ENST00000306256 SLC12A5Q9H2X9 1139 aa29.06■■■□□ 2.24
RER1-201ENST00000306256 ABCC6O95255 1503 aa29.04■■■□□ 2.24
RER1-201ENST00000306256 USP31Q70CQ4 1352 aa29.04■■■□□ 2.24
RER1-201ENST00000306256 HDGFL2Q7Z4V5 671 aaPredicted RBP29.03■■■□□ 2.24
RER1-201ENST00000306256 A0A1W2PP64 1363 aa29.01■■■□□ 2.24
RER1-201ENST00000306256 CARD10Q9BWT7 1032 aa29.01■■■□□ 2.23
RER1-201ENST00000306256 EDC4Q6P2E9 1401 aaKnown RBP29.01■■■□□ 2.23
RER1-201ENST00000306256 TRIM26Q12899 539 aaPredicted RBP29■■■□□ 2.23
RER1-201ENST00000306256 RGPD3A6NKT7 1758 aaPredicted RBP28.99■■■□□ 2.23
RER1-201ENST00000306256 RGPD4Q7Z3J3 1758 aa28.99■■■□□ 2.23
RER1-201ENST00000306256 C11orf95C9JLR9 678 aaPredicted RBP28.99■■■□□ 2.23
RER1-201ENST00000306256 MARCH10Q8NA82 808 aaPredicted RBP28.98■■■□□ 2.23
RER1-201ENST00000306256 CDCA7Q9BWT1 371 aaPredicted RBP28.98■■■□□ 2.23
RER1-201ENST00000306256 ST20-MTHFSA0A0A6YYL1 179 aa28.97■■■□□ 2.23
RER1-201ENST00000306256 PTF1AQ7RTS3 328 aa28.97■■■□□ 2.23
RER1-201ENST00000306256 TESK2Q96S53 571 aa28.97■■■□□ 2.23
RER1-201ENST00000306256 TERF2IPQ9NYB0 399 aa28.97■■■□□ 2.23
RER1-201ENST00000306256 CCDC7Q96M83 1385 aa28.96■■■□□ 2.23
RER1-201ENST00000306256 PUS7Q96PZ0 661 aaKnown RBP28.94■■■□□ 2.22
RER1-201ENST00000306256 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
RER1-201ENST00000306256 NBPF14Q5TI25 921 aa28.93■■■□□ 2.22
RER1-201ENST00000306256 ERBB3P21860 1342 aa28.93■■■□□ 2.22
RER1-201ENST00000306256 BCL11BQ9C0K0 894 aaPredicted RBP28.91■■■□□ 2.22
RER1-201ENST00000306256 NLRP2Q9NX02 1062 aa28.91■■■□□ 2.22
RER1-201ENST00000306256 TNS2Q63HR2 1409 aa28.91■■■□□ 2.22
RER1-201ENST00000306256 BCL9O00512 1426 aa28.9■■■□□ 2.22
RER1-201ENST00000306256 EXOC5O00471 708 aa28.89■■■□□ 2.22
RER1-201ENST00000306256 NINLQ9Y2I6 1382 aa28.88■■■□□ 2.21
RER1-201ENST00000306256 PLSCR1O15162 318 aa28.87■■■□□ 2.21
RER1-201ENST00000306256 ANKRD24Q8TF21 1146 aa28.87■■■□□ 2.21
RER1-201ENST00000306256 NHSQ6T4R5 1651 aa28.84■■■□□ 2.21
RER1-201ENST00000306256 USP47Q96K76 1375 aa28.84■■■□□ 2.21
RER1-201ENST00000306256 ANO8Q9HCE9 1232 aaPredicted RBP28.83■■■□□ 2.21
RER1-201ENST00000306256 FAM208AQ9UK61 1670 aaKnown RBP28.83■■■□□ 2.21
RER1-201ENST00000306256 RGPD2P0DJD1 1756 aa28.81■■■□□ 2.2
RER1-201ENST00000306256 IL2RBP14784 551 aa28.81■■■□□ 2.2
RER1-201ENST00000306256 PROM2Q8N271 834 aa28.8■■■□□ 2.2
RER1-201ENST00000306256 ANKRD36BQ8N2N9 1353 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 KCNQ2O43526 872 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 SLC24A1O60721 1099 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 IP6K1Q92551 441 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 LTV1Q96GA3 475 aaPredicted RBP28.79■■■□□ 2.2
RER1-201ENST00000306256 COG3Q96JB2 828 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 CASZ1Q86V15 1759 aa28.79■■■□□ 2.2
RER1-201ENST00000306256 FBLN1P23142 703 aa28.78■■■□□ 2.2
RER1-201ENST00000306256 ACSBG1Q96GR2 724 aa28.78■■■□□ 2.2
RER1-201ENST00000306256 BTAF1O14981 1849 aa28.78■■■□□ 2.2
RER1-201ENST00000306256 MAP3K19Q56UN5 1328 aa28.76■■■□□ 2.19
RER1-201ENST00000306256 TMF1P82094 1093 aa28.76■■■□□ 2.19
RER1-201ENST00000306256 KIF20BQ96Q89 1820 aa28.75■■■□□ 2.19
RER1-201ENST00000306256 TXNRD1Q16881 649 aa28.74■■■□□ 2.19
RER1-201ENST00000306256 SPON1Q9HCB6 807 aa28.74■■■□□ 2.19
RER1-201ENST00000306256 HOXC9P31274 260 aa28.72■■■□□ 2.19
RER1-201ENST00000306256 AMPHP49418 695 aa28.71■■■□□ 2.19
RER1-201ENST00000306256 PDGFDQ9GZP0 370 aaPredicted RBP28.71■■■□□ 2.19
RER1-201ENST00000306256 MYOM1P52179 1685 aa28.7■■■□□ 2.19
RER1-201ENST00000306256 GGNBP2Q9H3C7 697 aa28.7■■■□□ 2.18
RER1-201ENST00000306256 PPP1R1BQ9UD71 204 aaPredicted RBP28.69■■■□□ 2.18
RER1-201ENST00000306256 SHANK3Q9BYB0 1731 aa28.69■■■□□ 2.18
RER1-201ENST00000306256 FYB1O15117 783 aa28.68■■■□□ 2.18
RER1-201ENST00000306256 RRS1Q15050 365 aaKnown RBP28.67■■■□□ 2.18
RER1-201ENST00000306256 STK32BQ9NY57 414 aa28.67■■■□□ 2.18
RER1-201ENST00000306256 DDX54Q8TDD1 881 aaKnown RBP28.65■■■□□ 2.18
RER1-201ENST00000306256 DOT1LQ8TEK3 1739 aa28.65■■■□□ 2.18
RER1-201ENST00000306256 PAPPAQ13219 1627 aa28.65■■■□□ 2.18
RER1-201ENST00000306256 RTL1A6NKG5 1358 aa28.64■■■□□ 2.18
RER1-201ENST00000306256 ZBTB7AO95365 584 aa28.64■■■□□ 2.18
RER1-201ENST00000306256 PCGF6Q9BYE7 350 aa28.64■■■□□ 2.18
RER1-201ENST00000306256 SLC15A2Q16348 729 aa28.63■■■□□ 2.17
RER1-201ENST00000306256 MEGF6O75095 1541 aa28.63■■■□□ 2.17
RER1-201ENST00000306256 CDCA8Q53HL2 280 aa28.62■■■□□ 2.17
RER1-201ENST00000306256 USHBP1Q8N6Y0 703 aa28.58■■■□□ 2.17
RER1-201ENST00000306256 ATF5Q9Y2D1 282 aaPredicted RBP28.58■■■□□ 2.17
RER1-201ENST00000306256 NBPF6Q5VWK0 638 aa28.57■■■□□ 2.16
RER1-201ENST00000306256 NBPF4Q96M43 638 aa28.57■■■□□ 2.16
RER1-201ENST00000306256 CARD14Q9BXL6 1004 aa28.57■■■□□ 2.16
RER1-201ENST00000306256 TIMELESSQ9UNS1 1208 aa28.57■■■□□ 2.16
RER1-201ENST00000306256 NSD3Q9BZ95 1437 aa28.57■■■□□ 2.16
RER1-201ENST00000306256 SMG6Q86US8 1419 aaKnown RBP28.55■■■□□ 2.16
RER1-201ENST00000306256 PTGER2P43116 358 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms