RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SLC12A5Q9H2X9 1139 aa6.96□□□□□ -1.3
VPS50-202ENST00000305866 ABCC4O15439 1325 aa6.96□□□□□ -1.3
VPS50-202ENST00000305866 MST1RQ04912 1400 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 PIK3C2AO00443 1686 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 ALDH1L2Q3SY69 923 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 ARHGAP45Q92619 1136 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 ABCC6O95255 1503 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 PTPRUQ92729 1446 aa6.95□□□□□ -1.3
VPS50-202ENST00000305866 ZBTB7BO15156 539 aaPredicted RBP6.94□□□□□ -1.3
VPS50-202ENST00000305866 PMFBP1Q8TBY8 1022 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 SSH1Q8WYL5 1049 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 KIF16BQ96L93 1317 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 PLEKHG1Q9ULL1 1385 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 FYB1O15117 783 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 SALL3Q9BXA9 1300 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 NPM1P06748 294 aaKnown RBP eCLIP6.94□□□□□ -1.3
VPS50-202ENST00000305866 ZDHHC9Q9Y397 364 aa6.94□□□□□ -1.3
VPS50-202ENST00000305866 NCAPD2Q15021 1401 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
VPS50-202ENST00000305866 MTHFSP49914 203 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 LAMA4Q16363 1823 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 RIPK4P57078 832 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 TNPO1Q92973 898 aaKnown RBP6.93□□□□□ -1.3
VPS50-202ENST00000305866 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 PRDM4Q9UKN5 801 aa6.93□□□□□ -1.3
VPS50-202ENST00000305866 KIAA0232Q92628 1395 aa6.92□□□□□ -1.3
VPS50-202ENST00000305866 LMO7Q8WWI1 1683 aa6.92□□□□□ -1.3
VPS50-202ENST00000305866 FCHSD2O94868 740 aa6.92□□□□□ -1.3
VPS50-202ENST00000305866 MORC1Q86VD1 984 aa6.92□□□□□ -1.3
VPS50-202ENST00000305866 TMPOP42166 694 aaKnown RBP6.92□□□□□ -1.3
VPS50-202ENST00000305866 PNNQ9H307 717 aaKnown RBP6.92□□□□□ -1.3
VPS50-202ENST00000305866 C22orf23Q9BZE7 217 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 RRP7AQ9Y3A4 280 aaKnown RBP6.91□□□□□ -1.3
VPS50-202ENST00000305866 RTL1A6NKG5 1358 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 TRAK2O60296 914 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 BMP2KLQ5H9B9 411 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 TMEM57Q8N5G2 664 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 CFAP53Q96M91 514 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 ANKARQ7Z5J8 1434 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 RGPD2P0DJD1 1756 aa6.91□□□□□ -1.3
VPS50-202ENST00000305866 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
VPS50-202ENST00000305866 RAPGEF3O95398 923 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 ATF7IPQ6VMQ6 1270 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 MRPL50Q8N5N7 158 aaKnown RBP6.9□□□□□ -1.3
VPS50-202ENST00000305866 GRPEL1Q9HAV7 217 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 KDRP35968 1356 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 PLEKHG2Q9H7P9 1386 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 TMEM2Q9UHN6 1383 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 SLKQ9H2G2 1235 aaPredicted RBP6.9□□□□□ -1.3
VPS50-202ENST00000305866 TERF2IPQ9NYB0 399 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 CHMP5Q9NZZ3 219 aa6.9□□□□□ -1.3
VPS50-202ENST00000305866 ISY1Q9ULR0 285 aaKnown RBP6.9□□□□□ -1.3
VPS50-202ENST00000305866 CRB1P82279 1406 aa6.9□□□□□ -1.31
VPS50-202ENST00000305866 ARHGEF10O15013 1369 aa6.9□□□□□ -1.31
VPS50-202ENST00000305866 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.9□□□□□ -1.31
VPS50-202ENST00000305866 TRAK1Q9UPV9 953 aa6.9□□□□□ -1.31
VPS50-202ENST00000305866 GLI3P10071 1580 aa6.9□□□□□ -1.31
VPS50-202ENST00000305866 IL13P35225 146 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 ZNF445P59923 1031 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 EXOSC9Q06265 439 aaKnown RBP6.89□□□□□ -1.31
VPS50-202ENST00000305866 DZIP1LQ8IYY4 767 aaKnown RBP6.89□□□□□ -1.31
VPS50-202ENST00000305866 GAS2L2Q8NHY3 880 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 PXDNLA1KZ92 1463 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 FER1L4A9Z1Z3 1794 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 METP08581 1390 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 VAMP4O75379 141 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 CIZ1Q9ULV3 898 aaPredicted RBP6.89□□□□□ -1.31
VPS50-202ENST00000305866 NOB1Q9ULX3 412 aaKnown RBP6.89□□□□□ -1.31
VPS50-202ENST00000305866 PLEKHG3A1L390 1219 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 MRE11P49959 708 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 BCL2L13Q9BXK5 485 aa6.89□□□□□ -1.31
VPS50-202ENST00000305866 TSPOAP1O95153 1857 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 L1TD1Q5T7N2 865 aaKnown RBP6.88□□□□□ -1.31
VPS50-202ENST00000305866 TMEM132EQ6IEE7 984 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 LTN1O94822 1766 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 RBM42Q9BTD8 480 aaKnown RBP6.88□□□□□ -1.31
VPS50-202ENST00000305866 LMBRD1Q9NUN5 540 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 USP6P35125 1406 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 ZKSCAN2Q63HK3 967 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 IFT57Q9NWB7 429 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 POLKQ9UBT6 870 aa6.88□□□□□ -1.31
VPS50-202ENST00000305866 PKP1Q13835 747 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 TBC1D9Q6ZT07 1266 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 SOS1Q07889 1333 aaPredicted RBP6.87□□□□□ -1.31
VPS50-202ENST00000305866 ECM29Q5VYK3 1845 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 TSPYL6Q8N831 410 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 GPT2Q8TD30 523 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 RWDD1Q9H446 243 aaPredicted RBP6.87□□□□□ -1.31
VPS50-202ENST00000305866 TRPM3Q9HCF6 1732 aaPredicted RBP6.87□□□□□ -1.31
VPS50-202ENST00000305866 CEP170BQ9Y4F5 1589 aaPredicted RBP6.87□□□□□ -1.31
VPS50-202ENST00000305866 NFAT5O94916 1531 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 TERF1P54274 439 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 CHD1LQ86WJ1 897 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 CDK19Q9BWU1 502 aa6.87□□□□□ -1.31
VPS50-202ENST00000305866 OVOS2A0A0G2JMS6 1433 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 WASLO00401 505 aaPredicted RBP6.86□□□□□ -1.31
VPS50-202ENST00000305866 PLEKHM2Q8IWE5 1019 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 PHACTR3Q96KR7 559 aa6.86□□□□□ -1.31
VPS50-202ENST00000305866 PRAM1Q96QH2 718 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms