RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 KIF24Q5T7B8 1368 aa36.6■■■■□ 3.45
HDAC3-201ENST00000305264 HOXC9P31274 260 aa36.6■■■■□ 3.45
HDAC3-201ENST00000305264 COL14A1Q05707 1796 aaKnown RBP36.6■■■■□ 3.45
HDAC3-201ENST00000305264 ABCC6O95255 1503 aa36.59■■■■□ 3.45
HDAC3-201ENST00000305264 FAM83GA6ND36 823 aa36.58■■■■□ 3.45
HDAC3-201ENST00000305264 COL3A1P02461 1466 aaPredicted RBP36.57■■■■□ 3.45
HDAC3-201ENST00000305264 CCDC184Q52MB2 194 aa36.57■■■■□ 3.45
HDAC3-201ENST00000305264 PLCH1Q4KWH8 1693 aa36.57■■■■□ 3.44
HDAC3-201ENST00000305264 HSP90AB2PQ58FF8 381 aa36.57■■■■□ 3.44
HDAC3-201ENST00000305264 IP6K1Q92551 441 aa36.57■■■■□ 3.44
HDAC3-201ENST00000305264 AXIN2Q9Y2T1 843 aa36.56■■■■□ 3.44
HDAC3-201ENST00000305264 CAMTA1Q9Y6Y1 1673 aa36.54■■■■□ 3.44
HDAC3-201ENST00000305264 BLMP54132 1417 aaPredicted RBP36.52■■■■□ 3.44
HDAC3-201ENST00000305264 INSRP06213 1382 aa36.52■■■■□ 3.44
HDAC3-201ENST00000305264 ILDR1Q86SU0 546 aaPredicted RBP36.51■■■■□ 3.43
HDAC3-201ENST00000305264 CFAP53Q96M91 514 aa36.49■■■■□ 3.43
HDAC3-201ENST00000305264 C8orf37Q96NL8 207 aa36.48■■■■□ 3.43
HDAC3-201ENST00000305264 MRS2Q9HD23 443 aa36.47■■■■□ 3.43
HDAC3-201ENST00000305264 COL5A2P05997 1499 aaPredicted RBP36.46■■■■□ 3.43
HDAC3-201ENST00000305264 MEX3CQ5U5Q3 659 aaKnown RBP36.46■■■■□ 3.43
HDAC3-201ENST00000305264 CCER2I3L3R5 266 aa36.46■■■■□ 3.43
HDAC3-201ENST00000305264 LTV1Q96GA3 475 aaPredicted RBP36.46■■■■□ 3.43
HDAC3-201ENST00000305264 BTG4Q9NY30 223 aa36.46■■■■□ 3.43
HDAC3-201ENST00000305264 NRAPQ86VF7 1730 aa36.46■■■■□ 3.43
HDAC3-201ENST00000305264 NWD2Q9ULI1 1742 aa36.46■■■■□ 3.43
HDAC3-201ENST00000305264 EIF4A2Q14240 407 aaKnown RBP36.45■■■■□ 3.43
HDAC3-201ENST00000305264 SLIT2O94813 1529 aa36.45■■■■□ 3.43
HDAC3-201ENST00000305264 ERBB3P21860 1342 aa36.43■■■■□ 3.42
HDAC3-201ENST00000305264 ANKRD24Q8TF21 1146 aa36.42■■■■□ 3.42
HDAC3-201ENST00000305264 RGPD2P0DJD1 1756 aa36.42■■■■□ 3.42
HDAC3-201ENST00000305264 DIAPH1O60610 1272 aaKnown RBP36.42■■■■□ 3.42
HDAC3-201ENST00000305264 NGLY1Q96IV0 654 aa36.41■■■■□ 3.42
HDAC3-201ENST00000305264 IL13P35225 146 aa36.4■■■■□ 3.42
HDAC3-201ENST00000305264 RGPD1P0DJD0 1748 aa36.39■■■■□ 3.42
HDAC3-201ENST00000305264 FAM208AQ9UK61 1670 aaKnown RBP36.38■■■■□ 3.41
HDAC3-201ENST00000305264 STRN4Q9NRL3 753 aa36.37■■■■□ 3.41
HDAC3-201ENST00000305264 FNBP4Q8N3X1 1017 aaPredicted RBP36.35■■■■□ 3.41
HDAC3-201ENST00000305264 BCL9LQ86UU0 1499 aa36.35■■■■□ 3.41
HDAC3-201ENST00000305264 WDR17Q8IZU2 1322 aa36.33■■■■□ 3.41
HDAC3-201ENST00000305264 CSB-PGBD3P0DP91 1061 aa36.33■■■■□ 3.41
HDAC3-201ENST00000305264 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.33■■■■□ 3.41
HDAC3-201ENST00000305264 EVA1CP58658 441 aa36.32■■■■□ 3.4
HDAC3-201ENST00000305264 AFF2P51816 1311 aa36.32■■■■□ 3.4
HDAC3-201ENST00000305264 U2SURPO15042 1029 aaKnown RBP36.31■■■■□ 3.4
HDAC3-201ENST00000305264 LARP1Q6PKG0 1096 aaKnown RBP36.31■■■■□ 3.4
HDAC3-201ENST00000305264 EYA1Q99502 592 aa36.31■■■■□ 3.4
HDAC3-201ENST00000305264 NBPF6Q5VWK0 638 aa36.29■■■■□ 3.4
HDAC3-201ENST00000305264 PNISRQ8TF01 805 aaKnown RBP36.29■■■■□ 3.4
HDAC3-201ENST00000305264 NBPF4Q96M43 638 aa36.29■■■■□ 3.4
HDAC3-201ENST00000305264 NUDCQ9Y266 331 aa36.29■■■■□ 3.4
HDAC3-201ENST00000305264 UNC5CLQ8IV45 518 aa36.28■■■■□ 3.4
HDAC3-201ENST00000305264 IGSF1Q8N6C5 1336 aa36.28■■■■□ 3.4
HDAC3-201ENST00000305264 NLRP2Q9NX02 1062 aa36.27■■■■□ 3.4
HDAC3-201ENST00000305264 USP21Q9UK80 565 aa36.27■■■■□ 3.4
HDAC3-201ENST00000305264 USHBP1Q8N6Y0 703 aa36.27■■■■□ 3.4
HDAC3-201ENST00000305264 CRB1P82279 1406 aa36.26■■■■□ 3.4
HDAC3-201ENST00000305264 TOM1L2Q6ZVM7 507 aa36.26■■■■□ 3.4
HDAC3-201ENST00000305264 WDR43Q15061 677 aaKnown RBP eCLIP36.26■■■■□ 3.39
HDAC3-201ENST00000305264 U2AF1L5P0DN76 240 aaPredicted RBP36.25■■■■□ 3.39
HDAC3-201ENST00000305264 U2AF1Q01081 240 aaKnown RBP eCLIP36.25■■■■□ 3.39
HDAC3-201ENST00000305264 NCAPD2Q15021 1401 aa36.25■■■■□ 3.39
HDAC3-201ENST00000305264 AEBP1Q8IUX7 1158 aa36.23■■■■□ 3.39
HDAC3-201ENST00000305264 HMOX1P09601 288 aa36.22■■■■□ 3.39
HDAC3-201ENST00000305264 ADAMTS8Q9UP79 889 aa36.21■■■■□ 3.39
HDAC3-201ENST00000305264 SULT6B1Q6IMI4 303 aa36.2■■■■□ 3.39
HDAC3-201ENST00000305264 FAM9BQ8IZU0 186 aa36.2■■■■□ 3.39
HDAC3-201ENST00000305264 KDRP35968 1356 aa36.19■■■■□ 3.38
HDAC3-201ENST00000305264 CARD10Q9BWT7 1032 aa36.19■■■■□ 3.38
HDAC3-201ENST00000305264 USP35Q9P2H5 1018 aa36.18■■■■□ 3.38
HDAC3-201ENST00000305264 VPS72Q15906 364 aa36.17■■■■□ 3.38
HDAC3-201ENST00000305264 ATRNO75882 1429 aa36.16■■■■□ 3.38
HDAC3-201ENST00000305264 SPATA31A5Q5VU36 1347 aa36.15■■■■□ 3.38
HDAC3-201ENST00000305264 SPATA31A7Q8IWB4 1347 aa36.15■■■■□ 3.38
HDAC3-201ENST00000305264 SPATA31A1Q5TZJ5 1347 aa36.15■■■■□ 3.38
HDAC3-201ENST00000305264 RSPH6AQ9H0K4 717 aa36.15■■■■□ 3.38
HDAC3-201ENST00000305264 CCDC9Q9Y3X0 531 aaKnown RBP36.15■■■■□ 3.38
HDAC3-201ENST00000305264 WNK3Q9BYP7 1800 aa36.14■■■■□ 3.38
HDAC3-201ENST00000305264 MEGF6O75095 1541 aa36.11■■■■□ 3.37
HDAC3-201ENST00000305264 GLI3P10071 1580 aa36.11■■■■□ 3.37
HDAC3-201ENST00000305264 FCHSD2O94868 740 aa36.1■■■■□ 3.37
HDAC3-201ENST00000305264 TRPC5Q9UL62 973 aaPredicted RBP36.1■■■■□ 3.37
HDAC3-201ENST00000305264 PRKAR2BP31323 418 aa36.09■■■■□ 3.37
HDAC3-201ENST00000305264 TCP11L2Q8N4U5 519 aa36.09■■■■□ 3.37
HDAC3-201ENST00000305264 CCDC146Q8IYE0 955 aa36.08■■■■□ 3.37
HDAC3-201ENST00000305264 ZNF772Q68DY9 489 aaPredicted RBP36.07■■■■□ 3.37
HDAC3-201ENST00000305264 PARP4Q9UKK3 1724 aaKnown RBP36.07■■■■□ 3.37
HDAC3-201ENST00000305264 QTRT2Q9H974 415 aaKnown RBP36.06■■■■□ 3.36
HDAC3-201ENST00000305264 PLEKHF1Q96S99 279 aa36.06■■■■□ 3.36
HDAC3-201ENST00000305264 RGS17Q9UGC6 210 aaPredicted RBP36.06■■■■□ 3.36
HDAC3-201ENST00000305264 DISP2A7MBM2 1401 aa36.05■■■■□ 3.36
HDAC3-201ENST00000305264 RAPGEF4Q8WZA2 1011 aa36.04■■■■□ 3.36
HDAC3-201ENST00000305264 GJD4Q96KN9 370 aaPredicted RBP36.04■■■■□ 3.36
HDAC3-201ENST00000305264 PHF23Q9BUL5 403 aaPredicted RBP36.04■■■■□ 3.36
HDAC3-201ENST00000305264 THRAP3Q9Y2W1 955 aaKnown RBP36.03■■■■□ 3.36
HDAC3-201ENST00000305264 IL2RBP14784 551 aa36.02■■■■□ 3.36
HDAC3-201ENST00000305264 PHACTR3Q96KR7 559 aa36.01■■■■□ 3.36
HDAC3-201ENST00000305264 OVOS2A0A0G2JMS6 1433 aa36.01■■■■□ 3.35
HDAC3-201ENST00000305264 PKD1L3Q7Z443 1732 aa36■■■■□ 3.35
HDAC3-201ENST00000305264 TATP17735 454 aaPredicted RBP35.99■■■■□ 3.35
HDAC3-201ENST00000305264 FAM98CQ17RN3 349 aaKnown RBP35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms