RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NFAT5O94916 1531 aa23.52■■□□□ 1.36
TRAPPC1-201ENST00000303731 WDR17Q8IZU2 1322 aa23.51■■□□□ 1.35
TRAPPC1-201ENST00000303731 EDC4Q6P2E9 1401 aaKnown RBP23.5■■□□□ 1.35
TRAPPC1-201ENST00000303731 TOM1L2Q6ZVM7 507 aa23.5■■□□□ 1.35
TRAPPC1-201ENST00000303731 CDCA7Q9BWT1 371 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC1-201ENST00000303731 PARD3Q8TEW0 1356 aa23.49■■□□□ 1.35
TRAPPC1-201ENST00000303731 EN1Q05925 392 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC1-201ENST00000303731 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 ST20-MTHFSA0A0A6YYL1 179 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 TRIM37O94972 964 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 TESK2Q96S53 571 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 SLC12A5Q9H2X9 1139 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 AXIN2Q9Y2T1 843 aa23.47■■□□□ 1.35
TRAPPC1-201ENST00000303731 RGPD5Q99666 1765 aa23.46■■□□□ 1.35
TRAPPC1-201ENST00000303731 LRRC37A3O60309 1634 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 OVOS2A0A0G2JMS6 1433 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 OVOS2A0A0J9YW53 1432 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 OVOS2Q6IE36 1432 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 A0A1W2PP64 1363 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 CLSPNQ9HAW4 1339 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 SOX12O15370 315 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 TIMELESSQ9UNS1 1208 aa23.45■■□□□ 1.34
TRAPPC1-201ENST00000303731 DDB1Q16531 1140 aa23.44■■□□□ 1.34
TRAPPC1-201ENST00000303731 CARD10Q9BWT7 1032 aa23.44■■□□□ 1.34
TRAPPC1-201ENST00000303731 CSB-PGBD3P0DP91 1061 aa23.43■■□□□ 1.34
TRAPPC1-201ENST00000303731 NME9Q86XW9 330 aa23.43■■□□□ 1.34
TRAPPC1-201ENST00000303731 APBA3O96018 575 aa23.42■■□□□ 1.34
TRAPPC1-201ENST00000303731 LTN1O94822 1766 aa23.42■■□□□ 1.34
TRAPPC1-201ENST00000303731 CCDC7Q96M83 1385 aa23.41■■□□□ 1.34
TRAPPC1-201ENST00000303731 CAMKK2Q96RR4 588 aa23.41■■□□□ 1.34
TRAPPC1-201ENST00000303731 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
TRAPPC1-201ENST00000303731 LRP5O75197 1615 aa23.41■■□□□ 1.34
TRAPPC1-201ENST00000303731 USP47Q96K76 1375 aa23.4■■□□□ 1.34
TRAPPC1-201ENST00000303731 TMF1P82094 1093 aa23.39■■□□□ 1.33
TRAPPC1-201ENST00000303731 EZH2Q15910 746 aaKnown RBP23.39■■□□□ 1.33
TRAPPC1-201ENST00000303731 RREB1Q92766 1687 aa23.38■■□□□ 1.33
TRAPPC1-201ENST00000303731 BCL9O00512 1426 aa23.38■■□□□ 1.33
TRAPPC1-201ENST00000303731 CDCA8Q53HL2 280 aa23.37■■□□□ 1.33
TRAPPC1-201ENST00000303731 SBF2Q86WG5 1849 aa23.37■■□□□ 1.33
TRAPPC1-201ENST00000303731 ERBB3P21860 1342 aa23.36■■□□□ 1.33
TRAPPC1-201ENST00000303731 RGPD3A6NKT7 1758 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC1-201ENST00000303731 RGPD4Q7Z3J3 1758 aa23.36■■□□□ 1.33
TRAPPC1-201ENST00000303731 ANKRD36BQ8N2N9 1353 aa23.36■■□□□ 1.33
TRAPPC1-201ENST00000303731 PSDA5PKW4 1024 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC1-201ENST00000303731 EXOC5O00471 708 aa23.33■■□□□ 1.33
TRAPPC1-201ENST00000303731 COG3Q96JB2 828 aa23.33■■□□□ 1.33
TRAPPC1-201ENST00000303731 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.32
TRAPPC1-201ENST00000303731 R3HDM1Q15032 1099 aaKnown RBP23.32■■□□□ 1.32
TRAPPC1-201ENST00000303731 TNS2Q63HR2 1409 aa23.32■■□□□ 1.32
TRAPPC1-201ENST00000303731 FAM208AQ9UK61 1670 aaKnown RBP23.32■■□□□ 1.32
TRAPPC1-201ENST00000303731 NBPF14Q5TI25 921 aa23.31■■□□□ 1.32
TRAPPC1-201ENST00000303731 BCL11BQ9C0K0 894 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC1-201ENST00000303731 PLSCR1O15162 318 aa23.3■■□□□ 1.32
TRAPPC1-201ENST00000303731 MARCH10Q8NA82 808 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC1-201ENST00000303731 NLRP2Q9NX02 1062 aa23.3■■□□□ 1.32
TRAPPC1-201ENST00000303731 ANKRD24Q8TF21 1146 aa23.29■■□□□ 1.32
TRAPPC1-201ENST00000303731 IP6K1Q92551 441 aa23.29■■□□□ 1.32
TRAPPC1-201ENST00000303731 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
TRAPPC1-201ENST00000303731 IL2RBP14784 551 aa23.26■■□□□ 1.31
TRAPPC1-201ENST00000303731 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
TRAPPC1-201ENST00000303731 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
TRAPPC1-201ENST00000303731 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
TRAPPC1-201ENST00000303731 AMPHP49418 695 aa23.21■■□□□ 1.31
TRAPPC1-201ENST00000303731 NHSQ6T4R5 1651 aa23.21■■□□□ 1.31
TRAPPC1-201ENST00000303731 FYB1O15117 783 aa23.2■■□□□ 1.3
TRAPPC1-201ENST00000303731 HOXC9P31274 260 aa23.2■■□□□ 1.3
TRAPPC1-201ENST00000303731 MYOM1P52179 1685 aa23.19■■□□□ 1.3
TRAPPC1-201ENST00000303731 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
TRAPPC1-201ENST00000303731 LTV1Q96GA3 475 aaPredicted RBP23.16■■□□□ 1.3
TRAPPC1-201ENST00000303731 GGNBP2Q9H3C7 697 aa23.16■■□□□ 1.3
TRAPPC1-201ENST00000303731 SMG6Q86US8 1419 aaKnown RBP23.16■■□□□ 1.3
TRAPPC1-201ENST00000303731 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
TRAPPC1-201ENST00000303731 KAT6BQ8WYB5 2073 aa23.13■■□□□ 1.29
TRAPPC1-201ENST00000303731 TXNRD1Q16881 649 aa23.12■■□□□ 1.29
TRAPPC1-201ENST00000303731 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC1-201ENST00000303731 NSD3Q9BZ95 1437 aa23.12■■□□□ 1.29
TRAPPC1-201ENST00000303731 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
TRAPPC1-201ENST00000303731 PROM2Q8N271 834 aa23.11■■□□□ 1.29
TRAPPC1-201ENST00000303731 FLT4P35916 1363 aa23.11■■□□□ 1.29
TRAPPC1-201ENST00000303731 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 RGPD2P0DJD1 1756 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 KCNQ2O43526 872 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 FBLN1P23142 703 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 SPON1Q9HCB6 807 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 INSRP06213 1382 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 BTAF1O14981 1849 aa23.1■■□□□ 1.29
TRAPPC1-201ENST00000303731 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRAPPC1-201ENST00000303731 ACSBG1Q96GR2 724 aa23.09■■□□□ 1.29
TRAPPC1-201ENST00000303731 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
TRAPPC1-201ENST00000303731 STK32BQ9NY57 414 aa23.08■■□□□ 1.29
TRAPPC1-201ENST00000303731 DDX54Q8TDD1 881 aaKnown RBP23.07■■□□□ 1.28
TRAPPC1-201ENST00000303731 ANO8Q9HCE9 1232 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC1-201ENST00000303731 CASZ1Q86V15 1759 aa23.06■■□□□ 1.28
TRAPPC1-201ENST00000303731 ZCRB1Q8TBF4 217 aaKnown RBP23.06■■□□□ 1.28
TRAPPC1-201ENST00000303731 MEGF6O75095 1541 aa23.05■■□□□ 1.28
TRAPPC1-201ENST00000303731 NBPF6Q5VWK0 638 aa23.04■■□□□ 1.28
TRAPPC1-201ENST00000303731 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
TRAPPC1-201ENST00000303731 NBPF4Q96M43 638 aa23.04■■□□□ 1.28
TRAPPC1-201ENST00000303731 SHANK3Q9BYB0 1731 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms