RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 IP6K1Q92551 441 aa33.2■■■□□ 2.91
HOXC9-201ENST00000303450 AXIN2Q9Y2T1 843 aa33.2■■■□□ 2.91
HOXC9-201ENST00000303450 ABCC6O95255 1503 aa33.2■■■□□ 2.9
HOXC9-201ENST00000303450 CAMTA1Q9Y6Y1 1673 aa33.2■■■□□ 2.9
HOXC9-201ENST00000303450 BCL9LQ86UU0 1499 aa33.19■■■□□ 2.9
HOXC9-201ENST00000303450 ZNF772Q68DY9 489 aaPredicted RBP33.19■■■□□ 2.9
HOXC9-201ENST00000303450 EVA1CP58658 441 aa33.18■■■□□ 2.9
HOXC9-201ENST00000303450 RTL1A6NKG5 1358 aa33.18■■■□□ 2.9
HOXC9-201ENST00000303450 HOXC9P31274 260 aa33.18■■■□□ 2.9
HOXC9-201ENST00000303450 STRN4Q9NRL3 753 aa33.17■■■□□ 2.9
HOXC9-201ENST00000303450 KIF24Q5T7B8 1368 aa33.17■■■□□ 2.9
HOXC9-201ENST00000303450 RGPD5Q99666 1765 aa33.16■■■□□ 2.9
HOXC9-201ENST00000303450 FLT4P35916 1363 aa33.16■■■□□ 2.9
HOXC9-201ENST00000303450 PARD3Q8TEW0 1356 aa33.14■■■□□ 2.9
HOXC9-201ENST00000303450 NRAPQ86VF7 1730 aa33.14■■■□□ 2.9
HOXC9-201ENST00000303450 BLMP54132 1417 aaPredicted RBP33.14■■■□□ 2.9
HOXC9-201ENST00000303450 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.14■■■□□ 2.89
HOXC9-201ENST00000303450 PEAK1Q9H792 1746 aa33.14■■■□□ 2.89
HOXC9-201ENST00000303450 RGS17Q9UGC6 210 aaPredicted RBP33.13■■■□□ 2.89
HOXC9-201ENST00000303450 COL5A2P05997 1499 aaPredicted RBP33.13■■■□□ 2.89
HOXC9-201ENST00000303450 RALBP1Q15311 655 aa33.12■■■□□ 2.89
HOXC9-201ENST00000303450 TRPC5Q9UL62 973 aaPredicted RBP33.12■■■□□ 2.89
HOXC9-201ENST00000303450 SMG6Q86US8 1419 aaKnown RBP33.11■■■□□ 2.89
HOXC9-201ENST00000303450 HSP90AB2PQ58FF8 381 aa33.11■■■□□ 2.89
HOXC9-201ENST00000303450 QTRT2Q9H974 415 aaKnown RBP33.11■■■□□ 2.89
HOXC9-201ENST00000303450 MTHFSP49914 203 aa33.1■■■□□ 2.89
HOXC9-201ENST00000303450 CSB-PGBD3P0DP91 1061 aa33.09■■■□□ 2.89
HOXC9-201ENST00000303450 ANKRD24Q8TF21 1146 aa33.09■■■□□ 2.89
HOXC9-201ENST00000303450 LTV1Q96GA3 475 aaPredicted RBP33.09■■■□□ 2.89
HOXC9-201ENST00000303450 CCDC9Q9Y3X0 531 aaKnown RBP33.09■■■□□ 2.89
HOXC9-201ENST00000303450 INSRP06213 1382 aa33.09■■■□□ 2.89
HOXC9-201ENST00000303450 PPP2R1AP30153 589 aa33.08■■■□□ 2.89
HOXC9-201ENST00000303450 VPS72Q15906 364 aa33.08■■■□□ 2.89
HOXC9-201ENST00000303450 ERBB3P21860 1342 aa33.08■■■□□ 2.89
HOXC9-201ENST00000303450 LARP1Q6PKG0 1096 aaKnown RBP33.07■■■□□ 2.89
HOXC9-201ENST00000303450 WDR17Q8IZU2 1322 aa33.07■■■□□ 2.88
HOXC9-201ENST00000303450 ATRNO75882 1429 aa33.06■■■□□ 2.88
HOXC9-201ENST00000303450 PRKRIP1Q9H875 184 aaPredicted RBP33.06■■■□□ 2.88
HOXC9-201ENST00000303450 CDK12Q9NYV4 1490 aaPredicted RBP33.05■■■□□ 2.88
HOXC9-201ENST00000303450 TOM1L2Q6ZVM7 507 aa33.04■■■□□ 2.88
HOXC9-201ENST00000303450 POTEAQ6S8J7 498 aa33.02■■■□□ 2.88
HOXC9-201ENST00000303450 ANP32CO43423 234 aa33.02■■■□□ 2.88
HOXC9-201ENST00000303450 GJD4Q96KN9 370 aaPredicted RBP33.02■■■□□ 2.88
HOXC9-201ENST00000303450 CRB1P82279 1406 aa33.01■■■□□ 2.88
HOXC9-201ENST00000303450 SPATA31A5Q5VU36 1347 aa33■■■□□ 2.87
HOXC9-201ENST00000303450 SPATA31A7Q8IWB4 1347 aa33■■■□□ 2.87
HOXC9-201ENST00000303450 NLRP2Q9NX02 1062 aa33■■■□□ 2.87
HOXC9-201ENST00000303450 USP35Q9P2H5 1018 aa33■■■□□ 2.87
HOXC9-201ENST00000303450 MYBBP1AQ9BQG0 1328 aaKnown RBP32.99■■■□□ 2.87
HOXC9-201ENST00000303450 SPATA31A1Q5TZJ5 1347 aa32.98■■■□□ 2.87
HOXC9-201ENST00000303450 RBM6P78332 1123 aaKnown RBP32.97■■■□□ 2.87
HOXC9-201ENST00000303450 RXRBP28702 533 aa32.97■■■□□ 2.87
HOXC9-201ENST00000303450 CFAP53Q96M91 514 aa32.97■■■□□ 2.87
HOXC9-201ENST00000303450 CARD10Q9BWT7 1032 aa32.97■■■□□ 2.87
HOXC9-201ENST00000303450 FAM208AQ9UK61 1670 aaKnown RBP32.96■■■□□ 2.87
HOXC9-201ENST00000303450 EIF4A2Q14240 407 aaKnown RBP32.96■■■□□ 2.87
HOXC9-201ENST00000303450 TCP11L2Q8N4U5 519 aa32.93■■■□□ 2.86
HOXC9-201ENST00000303450 GLI3P10071 1580 aa32.93■■■□□ 2.86
HOXC9-201ENST00000303450 RGPD2P0DJD1 1756 aa32.92■■■□□ 2.86
HOXC9-201ENST00000303450 THRAP3Q9Y2W1 955 aaKnown RBP32.92■■■□□ 2.86
HOXC9-201ENST00000303450 DIAPH1O60610 1272 aaKnown RBP32.91■■■□□ 2.86
HOXC9-201ENST00000303450 NBPF6Q5VWK0 638 aa32.91■■■□□ 2.86
HOXC9-201ENST00000303450 NBPF4Q96M43 638 aa32.91■■■□□ 2.86
HOXC9-201ENST00000303450 DIEXFQ68CQ4 756 aaKnown RBP32.9■■■□□ 2.86
HOXC9-201ENST00000303450 IL13P35225 146 aa32.89■■■□□ 2.86
HOXC9-201ENST00000303450 FAM98CQ17RN3 349 aaKnown RBP32.88■■■□□ 2.85
HOXC9-201ENST00000303450 EYA1Q99502 592 aa32.87■■■□□ 2.85
HOXC9-201ENST00000303450 COL3A1P02461 1466 aaPredicted RBP32.87■■■□□ 2.85
HOXC9-201ENST00000303450 BARGINQ6ZT62 677 aa32.87■■■□□ 2.85
HOXC9-201ENST00000303450 USHBP1Q8N6Y0 703 aa32.87■■■□□ 2.85
HOXC9-201ENST00000303450 A0A0G2JS52 829 aa32.84■■■□□ 2.85
HOXC9-201ENST00000303450 MYT1Q01538 1121 aa32.84■■■□□ 2.85
HOXC9-201ENST00000303450 IGSF1Q8N6C5 1336 aa32.82■■■□□ 2.84
HOXC9-201ENST00000303450 ONECUT3O60422 494 aaPredicted RBP32.82■■■□□ 2.84
HOXC9-201ENST00000303450 NUDCQ9Y266 331 aa32.82■■■□□ 2.84
HOXC9-201ENST00000303450 U2SURPO15042 1029 aaKnown RBP32.8■■■□□ 2.84
HOXC9-201ENST00000303450 CDCA7Q9BWT1 371 aaPredicted RBP32.8■■■□□ 2.84
HOXC9-201ENST00000303450 IL2RBP14784 551 aa32.79■■■□□ 2.84
HOXC9-201ENST00000303450 SEPT12Q8IYM1 358 aa32.78■■■□□ 2.84
HOXC9-201ENST00000303450 NCAPD2Q15021 1401 aa32.77■■■□□ 2.84
HOXC9-201ENST00000303450 RGPD1P0DJD0 1748 aa32.77■■■□□ 2.84
HOXC9-201ENST00000303450 WNK3Q9BYP7 1800 aa32.77■■■□□ 2.84
HOXC9-201ENST00000303450 RAPGEF4Q8WZA2 1011 aa32.77■■■□□ 2.84
HOXC9-201ENST00000303450 SULT6B1Q6IMI4 303 aa32.76■■■□□ 2.83
HOXC9-201ENST00000303450 DISP2A7MBM2 1401 aa32.75■■■□□ 2.83
HOXC9-201ENST00000303450 RGS12O14924 1447 aa32.75■■■□□ 2.83
HOXC9-201ENST00000303450 THSD7AQ9UPZ6 1657 aa32.75■■■□□ 2.83
HOXC9-201ENST00000303450 TATP17735 454 aaPredicted RBP32.73■■■□□ 2.83
HOXC9-201ENST00000303450 AEBP1Q8IUX7 1158 aa32.73■■■□□ 2.83
HOXC9-201ENST00000303450 HMOX1P09601 288 aa32.72■■■□□ 2.83
HOXC9-201ENST00000303450 U2AF1L5P0DN76 240 aaPredicted RBP32.72■■■□□ 2.83
HOXC9-201ENST00000303450 U2AF1Q01081 240 aaKnown RBP eCLIP32.72■■■□□ 2.83
HOXC9-201ENST00000303450 DDB1Q16531 1140 aa32.71■■■□□ 2.83
HOXC9-201ENST00000303450 MEGF6O75095 1541 aa32.71■■■□□ 2.83
HOXC9-201ENST00000303450 PARP4Q9UKK3 1724 aaKnown RBP32.7■■■□□ 2.83
HOXC9-201ENST00000303450 KDRP35968 1356 aa32.7■■■□□ 2.83
HOXC9-201ENST00000303450 EXOC5O00471 708 aa32.69■■■□□ 2.82
HOXC9-201ENST00000303450 CCDC184Q52MB2 194 aa32.67■■■□□ 2.82
HOXC9-201ENST00000303450 OVOS2A0A0G2JMS6 1433 aa32.67■■■□□ 2.82
HOXC9-201ENST00000303450 PDE3BQ13370 1112 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms