RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 NME9Q86XW9 330 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
RAG1-201ENST00000299440 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
RAG1-201ENST00000299440 PPM1FP49593 454 aaPredicted RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 CNTROBQ8N137 903 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 TSR2Q969E8 191 aaKnown RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 TPM1P09493 284 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 PLB1Q6P1J6 1458 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 CNTLNQ9NXG0 1405 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 POLR3DP05423 398 aaPredicted RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 ZHX3Q9H4I2 956 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 LRRC9Q6ZRR7 1453 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 ZNF76P36508 570 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
RAG1-201ENST00000299440 ATAD2Q6PL18 1390 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 BECN2A8MW95 431 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 BEGAINQ9BUH8 593 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 NPHP3Q7Z494 1330 aa8.58□□□□□ -1.04
RAG1-201ENST00000299440 CA8P35219 290 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 NBPF6Q5VWK0 638 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 NBPF5PQ86XG9 351 aaPredicted RBP8.57□□□□□ -1.04
RAG1-201ENST00000299440 BICD2Q8TD16 824 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 NBPF4Q96M43 638 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 STK32BQ9NY57 414 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 CDK13Q14004 1512 aaKnown RBP8.57□□□□□ -1.04
RAG1-201ENST00000299440 FAM135AQ9P2D6 1515 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 NINLQ9Y2I6 1382 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 MATR3P43243 847 aaKnown RBP eCLIP8.57□□□□□ -1.04
RAG1-201ENST00000299440 SOGA3Q5TF21 947 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 ANKRD20A12PQ8NF67 263 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 FEZ1Q99689 392 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 DDX46Q7L014 1031 aaKnown RBP8.57□□□□□ -1.04
RAG1-201ENST00000299440 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 MAP4K4O95819 1239 aaPredicted RBP8.57□□□□□ -1.04
RAG1-201ENST00000299440 MYD88Q99836 296 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 BIN2Q9UBW5 565 aaPredicted RBP8.57□□□□□ -1.04
RAG1-201ENST00000299440 TEX14Q8IWB6 1497 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 ERC1Q8IUD2 1116 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 ZNF408Q9H9D4 720 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
RAG1-201ENST00000299440 ANKRD30BQ9BXX2 1392 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 GNAI2P04899 355 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 GPR162Q16538 588 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 MCM10Q7L590 875 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 PANK1Q8TE04 598 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 LRRC59Q96AG4 307 aaKnown RBP8.56□□□□□ -1.04
RAG1-201ENST00000299440 MYO1BO43795 1136 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 ANKRD24Q8TF21 1146 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 ATP6V1DQ9Y5K8 247 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 GOLGA6L19H0YKK7 550 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 ADAMTS8Q9UP79 889 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 HFM1A2PYH4 1435 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 FANCAO15360 1455 aa8.56□□□□□ -1.04
RAG1-201ENST00000299440 HOOK1Q9UJC3 728 aaKnown RBP8.56□□□□□ -1.04
RAG1-201ENST00000299440 ZNF608Q9ULD9 1512 aaPredicted RBP8.56□□□□□ -1.04
RAG1-201ENST00000299440 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 MAGI1Q96QZ7 1491 aaPredicted RBP8.55□□□□□ -1.04
RAG1-201ENST00000299440 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
RAG1-201ENST00000299440 LAMC3Q9Y6N6 1575 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 GRIN2AQ12879 1464 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 IFIT1P09914 478 aaKnown RBP8.55□□□□□ -1.04
RAG1-201ENST00000299440 SMC3Q9UQE7 1217 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 HMGXB3Q12766 1538 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 GLIPR1L2Q4G1C9 344 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 EXOC6Q8TAG9 804 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 PPP2R1AP30153 589 aa8.55□□□□□ -1.04
RAG1-201ENST00000299440 HECW1Q76N89 1606 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 IPO7O95373 1038 aaKnown RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 LMOD1P29536 600 aaPredicted RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 ZSCAN25Q6NSZ9 544 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 AACSQ86V21 672 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 CCDC69A6NI79 296 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 PTMSP20962 102 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 NAP1L1P55209 391 aaKnown RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 JDP2Q8WYK2 163 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 F8W031 263 aaPredicted RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 NF2P35240 595 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 DCTN1Q14203 1278 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.54□□□□□ -1.04
RAG1-201ENST00000299440 SLC4A8Q2Y0W8 1093 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 IFNL2Q8IZJ0 200 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
RAG1-201ENST00000299440 MKNK2Q9HBH9 465 aa8.54□□□□□ -1.04
RAG1-201ENST00000299440 SRGAP3O43295 1099 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 OFD1O75665 1012 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 BAG6P46379 1132 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 HSP90AB3PQ58FF7 597 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 AIDAQ96BJ3 306 aa8.53□□□□□ -1.04
RAG1-201ENST00000299440 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms