RNA–Protein interactions for RNA: ENST00000296953.6

CREBRF-201, Transcript of CREB3 regulatory factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CREBRF, Length 7,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CREBRF-201ENST00000296953 HMGB1P09429 215 aaKnown RBP3.89□□□□□ -1.79
CREBRF-201ENST00000296953 NBPF1Q3BBV0 1214 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 ERCC6L2Q5T890 1561 aa3.89□□□□□ -1.79
CREBRF-201ENST00000296953 TMC1Q8TDI8 760 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 KIF2CQ99661 725 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CAMTA1Q9Y6Y1 1673 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CD109Q6YHK3 1445 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 TDRD9Q8NDG6 1382 aaKnown RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CENPQQ7L2Z9 268 aaPredicted RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 NBPF11Q86T75 865 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 FAM184AQ8NB25 1140 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 SPTLC3Q9NUV7 552 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 NEXMIFQ5QGS0 1516 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 DUOX1Q9NRD9 1551 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CANXP27824 592 aaKnown RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 MCCD1P59942 119 aaPredicted RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CASKIN1Q8WXD9 1431 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 PCF11O94913 1555 aaKnown RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 SYAP1Q96A49 352 aaPredicted RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 ALDH2P05091 517 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 CALRP27797 417 aaKnown RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 HSP90AA2PQ14568 343 aaPredicted RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 IFT43Q96FT9 208 aa3.88□□□□□ -1.79
CREBRF-201ENST00000296953 TBC1D10BQ4KMP7 808 aaPredicted RBP3.88□□□□□ -1.79
CREBRF-201ENST00000296953 ADRA2BP18089 450 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 CASC1Q6TDU7 716 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 SIRT1Q96EB6 747 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 RAI14Q9P0K7 980 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 NUP160Q12769 1436 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 CAVIN2O95810 425 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 NOP2P46087 812 aaKnown RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 BACH2Q9BYV9 841 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 HDAC5Q9UQL6 1122 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 PIM1P11309 404 aaPredicted RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 CHAF1AQ13111 956 aaPredicted RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 DDX10Q13206 875 aaKnown RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 NBPF10Q6P3W6 841 aaKnown RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 AGMOQ6ZNB7 445 aa3.87□□□□□ -1.79
CREBRF-201ENST00000296953 PRKRIP1Q9H875 184 aaPredicted RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 RRAGDQ9NQL2 400 aaPredicted RBP3.87□□□□□ -1.79
CREBRF-201ENST00000296953 PTPRCP08575 1304 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 COL24A1Q17RW2 1714 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 HELBQ8NG08 1087 aaPredicted RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 UTP14AQ9BVJ6 771 aaKnown RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 ERBB4Q15303 1308 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 CCDC66A2RUB6 948 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 PLCH2O75038 1416 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 PIK3C2BO00750 1634 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 BBOX1O75936 387 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 FOXD1Q16676 465 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 IQCEQ6IPM2 695 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 ARHGEF1Q92888 912 aaKnown RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 PHRF1Q9P1Y6 1649 aaKnown RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 FAM109BQ6ICB4 259 aaPredicted RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 RREB1Q92766 1687 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 KCNG1Q9UIX4 513 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 NUP155O75694 1391 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 ATF7P17544 494 aaPredicted RBP3.86□□□□□ -1.79
CREBRF-201ENST00000296953 PAGR1Q9BTK6 254 aa3.86□□□□□ -1.79
CREBRF-201ENST00000296953 ARHGEF5Q12774 1597 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 MBD3O95983 291 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 PDE3AQ14432 1141 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 TSNAXIP1Q2TAA8 658 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 FAM161AQ3B820 660 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 C1QTNF12Q5T7M4 302 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 TSHZ1Q6ZSZ6 1077 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 NR2E3Q9Y5X4 410 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 ADAMTSL3P82987 1691 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 KIF2AO00139 706 aaPredicted RBP3.85□□□□□ -1.79
CREBRF-201ENST00000296953 EPB41L2O43491 1005 aaKnown RBP3.85□□□□□ -1.79
CREBRF-201ENST00000296953 TUBB4BP68371 445 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 CHMP5Q9NZZ3 219 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 POTEDQ86YR6 584 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 TSPAN18Q96SJ8 248 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 NFE2L3Q9Y4A8 694 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 PCDHGA4Q9Y5G9 962 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 MYBPC2Q14324 1141 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 RBM10P98175 930 aaKnown RBP3.85□□□□□ -1.79
CREBRF-201ENST00000296953 SETDB2Q96T68 719 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 SLC4A1APQ9BWU0 796 aaKnown RBP3.85□□□□□ -1.79
CREBRF-201ENST00000296953 TOPBP1Q92547 1522 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 PEAK1Q9H792 1746 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 CAPN2P17655 700 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 NME8Q8N427 588 aa3.85□□□□□ -1.79
CREBRF-201ENST00000296953 KDM6AO15550 1401 aaPredicted RBP3.84□□□□□ -1.79
CREBRF-201ENST00000296953 NPHP4O75161 1426 aaPredicted RBP3.84□□□□□ -1.79
CREBRF-201ENST00000296953 ZBTB22O15209 634 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 CNGB1Q14028 1251 aaPredicted RBP3.84□□□□□ -1.79
CREBRF-201ENST00000296953 CCSAPQ6IQ19 270 aaPredicted RBP3.84□□□□□ -1.79
CREBRF-201ENST00000296953 PMFBP1Q8TBY8 1022 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 CCDC7Q96M83 1385 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 SPAG9O60271 1321 aaKnown RBP3.84□□□□□ -1.79
CREBRF-201ENST00000296953 TUBBP07437 444 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 KIAA2012Q0VF49 1180 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 SGSM2O43147 1006 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 OFD1O75665 1012 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 MCM2P49736 904 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 DIAPH3Q9NSV4 1193 aa3.84□□□□□ -1.79
CREBRF-201ENST00000296953 BHMG1C9JSJ3 638 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms