RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 SOX12O15370 315 aa23.03■■□□□ 1.28
NPM1-201ENST00000296930 SLC24A1O60721 1099 aa23.03■■□□□ 1.28
NPM1-201ENST00000296930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.03■■□□□ 1.28
NPM1-201ENST00000296930 SLC12A5Q9H2X9 1139 aa23.03■■□□□ 1.28
NPM1-201ENST00000296930 EN1Q05925 392 aaPredicted RBP23.02■■□□□ 1.28
NPM1-201ENST00000296930 TOM1L2Q6ZVM7 507 aa23.02■■□□□ 1.28
NPM1-201ENST00000296930 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
NPM1-201ENST00000296930 USP31Q70CQ4 1352 aa23.02■■□□□ 1.28
NPM1-201ENST00000296930 WDR17Q8IZU2 1322 aa23.02■■□□□ 1.28
NPM1-201ENST00000296930 TRIM37O94972 964 aa23.01■■□□□ 1.27
NPM1-201ENST00000296930 TERF2IPQ9NYB0 399 aa23.01■■□□□ 1.27
NPM1-201ENST00000296930 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
NPM1-201ENST00000296930 TESK2Q96S53 571 aa23.01■■□□□ 1.27
NPM1-201ENST00000296930 EDC4Q6P2E9 1401 aaKnown RBP23■■□□□ 1.27
NPM1-201ENST00000296930 ABCC6O95255 1503 aa23■■□□□ 1.27
NPM1-201ENST00000296930 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
NPM1-201ENST00000296930 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
NPM1-201ENST00000296930 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
NPM1-201ENST00000296930 NME9Q86XW9 330 aa22.98■■□□□ 1.27
NPM1-201ENST00000296930 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
NPM1-201ENST00000296930 LRRC37A3O60309 1634 aa22.96■■□□□ 1.27
NPM1-201ENST00000296930 APBA3O96018 575 aa22.96■■□□□ 1.27
NPM1-201ENST00000296930 CSB-PGBD3P0DP91 1061 aa22.96■■□□□ 1.27
NPM1-201ENST00000296930 DDB1Q16531 1140 aa22.95■■□□□ 1.26
NPM1-201ENST00000296930 CDCA7Q9BWT1 371 aaPredicted RBP22.95■■□□□ 1.26
NPM1-201ENST00000296930 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
NPM1-201ENST00000296930 LTN1O94822 1766 aa22.95■■□□□ 1.26
NPM1-201ENST00000296930 EZH2Q15910 746 aaKnown RBP22.94■■□□□ 1.26
NPM1-201ENST00000296930 CAMKK2Q96RR4 588 aa22.94■■□□□ 1.26
NPM1-201ENST00000296930 CARD10Q9BWT7 1032 aa22.94■■□□□ 1.26
NPM1-201ENST00000296930 TIMELESSQ9UNS1 1208 aa22.94■■□□□ 1.26
NPM1-201ENST00000296930 OVOS2A0A0G2JMS6 1433 aa22.93■■□□□ 1.26
NPM1-201ENST00000296930 OVOS2A0A0J9YW53 1432 aa22.93■■□□□ 1.26
NPM1-201ENST00000296930 OVOS2Q6IE36 1432 aa22.93■■□□□ 1.26
NPM1-201ENST00000296930 PEAK1Q9H792 1746 aa22.93■■□□□ 1.26
NPM1-201ENST00000296930 USP47Q96K76 1375 aa22.92■■□□□ 1.26
NPM1-201ENST00000296930 PSDA5PKW4 1024 aaPredicted RBP22.91■■□□□ 1.26
NPM1-201ENST00000296930 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
NPM1-201ENST00000296930 SBF2Q86WG5 1849 aa22.9■■□□□ 1.26
NPM1-201ENST00000296930 TMF1P82094 1093 aa22.89■■□□□ 1.26
NPM1-201ENST00000296930 RREB1Q92766 1687 aa22.88■■□□□ 1.25
NPM1-201ENST00000296930 LRP5O75197 1615 aa22.88■■□□□ 1.25
NPM1-201ENST00000296930 ERBB3P21860 1342 aa22.88■■□□□ 1.25
NPM1-201ENST00000296930 ANKRD36BQ8N2N9 1353 aa22.87■■□□□ 1.25
NPM1-201ENST00000296930 R3HDM1Q15032 1099 aaKnown RBP22.86■■□□□ 1.25
NPM1-201ENST00000296930 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
NPM1-201ENST00000296930 NUP188Q5SRE5 1749 aa22.85■■□□□ 1.25
NPM1-201ENST00000296930 EXOC5O00471 708 aa22.84■■□□□ 1.25
NPM1-201ENST00000296930 COG3Q96JB2 828 aa22.84■■□□□ 1.25
NPM1-201ENST00000296930 NLRP2Q9NX02 1062 aa22.84■■□□□ 1.25
NPM1-201ENST00000296930 BCL9O00512 1426 aa22.84■■□□□ 1.25
NPM1-201ENST00000296930 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
NPM1-201ENST00000296930 ANKRD24Q8TF21 1146 aa22.83■■□□□ 1.24
NPM1-201ENST00000296930 RGPD3A6NKT7 1758 aaPredicted RBP22.83■■□□□ 1.24
NPM1-201ENST00000296930 RGPD4Q7Z3J3 1758 aa22.83■■□□□ 1.24
NPM1-201ENST00000296930 BCL11BQ9C0K0 894 aaPredicted RBP22.81■■□□□ 1.24
NPM1-201ENST00000296930 TNS2Q63HR2 1409 aa22.81■■□□□ 1.24
NPM1-201ENST00000296930 NBPF14Q5TI25 921 aa22.81■■□□□ 1.24
NPM1-201ENST00000296930 IP6K1Q92551 441 aa22.81■■□□□ 1.24
NPM1-201ENST00000296930 PLSCR1O15162 318 aa22.8■■□□□ 1.24
NPM1-201ENST00000296930 FAM208AQ9UK61 1670 aaKnown RBP22.8■■□□□ 1.24
NPM1-201ENST00000296930 IL2RBP14784 551 aa22.78■■□□□ 1.24
NPM1-201ENST00000296930 MAP3K19Q56UN5 1328 aa22.76■■□□□ 1.23
NPM1-201ENST00000296930 FYB1O15117 783 aa22.75■■□□□ 1.23
NPM1-201ENST00000296930 PTF1AQ7RTS3 328 aa22.75■■□□□ 1.23
NPM1-201ENST00000296930 AMPHP49418 695 aa22.74■■□□□ 1.23
NPM1-201ENST00000296930 HOXC9P31274 260 aa22.73■■□□□ 1.23
NPM1-201ENST00000296930 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
NPM1-201ENST00000296930 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
NPM1-201ENST00000296930 GGNBP2Q9H3C7 697 aa22.73■■□□□ 1.23
NPM1-201ENST00000296930 MYOM1P52179 1685 aa22.72■■□□□ 1.23
NPM1-201ENST00000296930 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
NPM1-201ENST00000296930 FBLN1P23142 703 aa22.71■■□□□ 1.23
NPM1-201ENST00000296930 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
NPM1-201ENST00000296930 KAT6BQ8WYB5 2073 aa22.71■■□□□ 1.23
NPM1-201ENST00000296930 KCNQ2O43526 872 aa22.68■■□□□ 1.22
NPM1-201ENST00000296930 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
NPM1-201ENST00000296930 RGPD2P0DJD1 1756 aa22.68■■□□□ 1.22
NPM1-201ENST00000296930 PROM2Q8N271 834 aa22.67■■□□□ 1.22
NPM1-201ENST00000296930 CARD14Q9BXL6 1004 aa22.66■■□□□ 1.22
NPM1-201ENST00000296930 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
NPM1-201ENST00000296930 NSD3Q9BZ95 1437 aa22.65■■□□□ 1.22
NPM1-201ENST00000296930 TXNRD1Q16881 649 aa22.65■■□□□ 1.22
NPM1-201ENST00000296930 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.22
NPM1-201ENST00000296930 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.21
NPM1-201ENST00000296930 BTAF1O14981 1849 aa22.63■■□□□ 1.21
NPM1-201ENST00000296930 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
NPM1-201ENST00000296930 DDX54Q8TDD1 881 aaKnown RBP22.62■■□□□ 1.21
NPM1-201ENST00000296930 EIF4G2P78344 907 aaKnown RBP eCLIP22.61■■□□□ 1.212e-6■□□□□ 8.2
NPM1-201ENST00000296930 SPON1Q9HCB6 807 aa22.61■■□□□ 1.21
NPM1-201ENST00000296930 INSRP06213 1382 aa22.61■■□□□ 1.21
NPM1-201ENST00000296930 FLT4P35916 1363 aa22.61■■□□□ 1.21
NPM1-201ENST00000296930 NBPF6Q5VWK0 638 aa22.6■■□□□ 1.21
NPM1-201ENST00000296930 NBPF4Q96M43 638 aa22.6■■□□□ 1.21
NPM1-201ENST00000296930 ZCRB1Q8TBF4 217 aaKnown RBP22.59■■□□□ 1.21
NPM1-201ENST00000296930 STK32BQ9NY57 414 aa22.59■■□□□ 1.21
NPM1-201ENST00000296930 CASZ1Q86V15 1759 aa22.59■■□□□ 1.21
NPM1-201ENST00000296930 MEGF6O75095 1541 aa22.59■■□□□ 1.21
NPM1-201ENST00000296930 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.21
NPM1-201ENST00000296930 CGNL1Q0VF96 1302 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms