RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 COL5A2P05997 1499 aaPredicted RBP18■□□□□ 0.47
CCDC42-201ENST00000293845 RRS1Q15050 365 aaKnown RBP18■□□□□ 0.47
CCDC42-201ENST00000293845 FAM208AQ9UK61 1670 aaKnown RBP17.99■□□□□ 0.47
CCDC42-201ENST00000293845 BTG4Q9NY30 223 aa17.99■□□□□ 0.47
CCDC42-201ENST00000293845 POLKQ9UBT6 870 aa17.99■□□□□ 0.47
CCDC42-201ENST00000293845 FLT4P35916 1363 aa17.99■□□□□ 0.47
CCDC42-201ENST00000293845 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
CCDC42-201ENST00000293845 TNNT2P45379 298 aaPredicted RBP17.98■□□□□ 0.47
CCDC42-201ENST00000293845 IP6K1Q92551 441 aa17.98■□□□□ 0.47
CCDC42-201ENST00000293845 USP21Q9UK80 565 aa17.98■□□□□ 0.47
CCDC42-201ENST00000293845 AXIN2Q9Y2T1 843 aa17.98■□□□□ 0.47
CCDC42-201ENST00000293845 EMILIN1Q9Y6C2 1016 aa17.98■□□□□ 0.47
CCDC42-201ENST00000293845 CDK12Q9NYV4 1490 aaPredicted RBP17.98■□□□□ 0.47
CCDC42-201ENST00000293845 HOXC9P31274 260 aa17.97■□□□□ 0.47
CCDC42-201ENST00000293845 ZNF772Q68DY9 489 aaPredicted RBP17.97■□□□□ 0.47
CCDC42-201ENST00000293845 UNC5CLQ8IV45 518 aa17.97■□□□□ 0.47
CCDC42-201ENST00000293845 ATRNO75882 1429 aa17.96■□□□□ 0.47
CCDC42-201ENST00000293845 AMPHP49418 695 aa17.96■□□□□ 0.47
CCDC42-201ENST00000293845 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
CCDC42-201ENST00000293845 INSRP06213 1382 aa17.95■□□□□ 0.46
CCDC42-201ENST00000293845 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
CCDC42-201ENST00000293845 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
CCDC42-201ENST00000293845 ERBB3P21860 1342 aa17.94■□□□□ 0.46
CCDC42-201ENST00000293845 RALBP1Q15311 655 aa17.94■□□□□ 0.46
CCDC42-201ENST00000293845 TRPC5Q9UL62 973 aaPredicted RBP17.93■□□□□ 0.46
CCDC42-201ENST00000293845 RGPD2P0DJD1 1756 aa17.93■□□□□ 0.46
CCDC42-201ENST00000293845 WDR17Q8IZU2 1322 aa17.93■□□□□ 0.46
CCDC42-201ENST00000293845 VPS72Q15906 364 aa17.92■□□□□ 0.46
CCDC42-201ENST00000293845 GLI3P10071 1580 aa17.92■□□□□ 0.46
CCDC42-201ENST00000293845 PPP2R1AP30153 589 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 MTHFSP49914 203 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 HSP90AB2PQ58FF8 381 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 PRKRIP1Q9H875 184 aaPredicted RBP17.91■□□□□ 0.46
CCDC42-201ENST00000293845 STRN4Q9NRL3 753 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 CRB1P82279 1406 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 PPM1GO15355 546 aaPredicted RBP17.91■□□□□ 0.46
CCDC42-201ENST00000293845 EVA1CP58658 441 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 ANKRD24Q8TF21 1146 aa17.91■□□□□ 0.46
CCDC42-201ENST00000293845 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
CCDC42-201ENST00000293845 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
CCDC42-201ENST00000293845 SPATA31A5Q5VU36 1347 aa17.89■□□□□ 0.45
CCDC42-201ENST00000293845 SPATA31A7Q8IWB4 1347 aa17.89■□□□□ 0.45
CCDC42-201ENST00000293845 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
CCDC42-201ENST00000293845 RGPD1P0DJD0 1748 aa17.88■□□□□ 0.45
CCDC42-201ENST00000293845 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
CCDC42-201ENST00000293845 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
CCDC42-201ENST00000293845 SPATA31A1Q5TZJ5 1347 aa17.87■□□□□ 0.45
CCDC42-201ENST00000293845 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
CCDC42-201ENST00000293845 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
CCDC42-201ENST00000293845 NCAPD2Q15021 1401 aa17.86■□□□□ 0.45
CCDC42-201ENST00000293845 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
CCDC42-201ENST00000293845 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
CCDC42-201ENST00000293845 ANP32CO43423 234 aa17.85■□□□□ 0.45
CCDC42-201ENST00000293845 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
CCDC42-201ENST00000293845 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
CCDC42-201ENST00000293845 LTV1Q96GA3 475 aaPredicted RBP17.85■□□□□ 0.45
CCDC42-201ENST00000293845 THSD7AQ9UPZ6 1657 aa17.84■□□□□ 0.45
CCDC42-201ENST00000293845 THRAP3Q9Y2W1 955 aaKnown RBP17.84■□□□□ 0.45
CCDC42-201ENST00000293845 CCDC9Q9Y3X0 531 aaKnown RBP17.84■□□□□ 0.45
CCDC42-201ENST00000293845 CFAP53Q96M91 514 aa17.83■□□□□ 0.45
CCDC42-201ENST00000293845 PARP4Q9UKK3 1724 aaKnown RBP17.83■□□□□ 0.44
CCDC42-201ENST00000293845 IL13P35225 146 aa17.82■□□□□ 0.44
CCDC42-201ENST00000293845 BARGINQ6ZT62 677 aa17.82■□□□□ 0.44
CCDC42-201ENST00000293845 TCP11L2Q8N4U5 519 aa17.82■□□□□ 0.44
CCDC42-201ENST00000293845 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
CCDC42-201ENST00000293845 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
CCDC42-201ENST00000293845 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
CCDC42-201ENST00000293845 RXRBP28702 533 aa17.81■□□□□ 0.44
CCDC42-201ENST00000293845 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
CCDC42-201ENST00000293845 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
CCDC42-201ENST00000293845 IGSF1Q8N6C5 1336 aa17.81■□□□□ 0.44
CCDC42-201ENST00000293845 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
CCDC42-201ENST00000293845 EYA1Q99502 592 aa17.8■□□□□ 0.44
CCDC42-201ENST00000293845 USP35Q9P2H5 1018 aa17.8■□□□□ 0.44
CCDC42-201ENST00000293845 BRWD3Q6RI45 1802 aa17.79■□□□□ 0.44
CCDC42-201ENST00000293845 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
CCDC42-201ENST00000293845 RGS12O14924 1447 aa17.78■□□□□ 0.44
CCDC42-201ENST00000293845 FAM98CQ17RN3 349 aaKnown RBP17.78■□□□□ 0.44
CCDC42-201ENST00000293845 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
CCDC42-201ENST00000293845 CDCA7Q9BWT1 371 aaPredicted RBP17.78■□□□□ 0.44
CCDC42-201ENST00000293845 KDRP35968 1356 aa17.77■□□□□ 0.44
CCDC42-201ENST00000293845 PLEKHG2Q9H7P9 1386 aa17.76■□□□□ 0.43
CCDC42-201ENST00000293845 MEGF6O75095 1541 aa17.76■□□□□ 0.43
CCDC42-201ENST00000293845 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
CCDC42-201ENST00000293845 USHBP1Q8N6Y0 703 aa17.76■□□□□ 0.43
CCDC42-201ENST00000293845 SHANK3Q9BYB0 1731 aa17.75■□□□□ 0.43
CCDC42-201ENST00000293845 IL2RBP14784 551 aa17.75■□□□□ 0.43
CCDC42-201ENST00000293845 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
CCDC42-201ENST00000293845 OVOS2A0A0G2JMS6 1433 aa17.74■□□□□ 0.43
CCDC42-201ENST00000293845 TNS2Q63HR2 1409 aa17.73■□□□□ 0.43
CCDC42-201ENST00000293845 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
CCDC42-201ENST00000293845 SULT6B1Q6IMI4 303 aa17.72■□□□□ 0.43
CCDC42-201ENST00000293845 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
CCDC42-201ENST00000293845 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
CCDC42-201ENST00000293845 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
CCDC42-201ENST00000293845 TATP17735 454 aaPredicted RBP17.7■□□□□ 0.42
CCDC42-201ENST00000293845 A0A0G2JS52 829 aa17.69■□□□□ 0.42
CCDC42-201ENST00000293845 MYT1Q01538 1121 aa17.69■□□□□ 0.42
CCDC42-201ENST00000293845 DDB1Q16531 1140 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms