RNA–Protein interactions for RNA: ENST00000293826.4

TNFSF12-TNFSF13-201, Transcript of TNFSF12-TNFSF13 readthrough, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF12-TNFSF13, Length 1,816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13-201ENST00000293826 U2AF1Q01081 240 aaKnown RBP eCLIP31.77■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 EIF4A2Q14240 407 aaKnown RBP31.77■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 ARHGEF25Q86VW2 580 aa31.77■■■□□ 2.68
TNFSF12-TNFSF13-201ENST00000293826 BLMP54132 1417 aaPredicted RBP31.76■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 ABCA3Q99758 1704 aa31.75■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 LRRC59Q96AG4 307 aaKnown RBP31.74■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 NUDCQ9Y266 331 aa31.73■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 ZBED9Q6R2W3 1325 aa31.71■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 IP6K1Q92551 441 aa31.7■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 LTV1Q96GA3 475 aaPredicted RBP31.7■■■□□ 2.67
TNFSF12-TNFSF13-201ENST00000293826 RTL1A6NKG5 1358 aa31.69■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 AXIN2Q9Y2T1 843 aa31.69■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 RGPD5Q99666 1765 aa31.69■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 KIF24Q5T7B8 1368 aa31.68■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 HMOX1P09601 288 aa31.68■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 CHRNA2Q15822 529 aa31.68■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 SALL2Q9Y467 1007 aaPredicted RBP31.68■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 KIAA0232Q92628 1395 aa31.68■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 HAP1P54257 671 aaPredicted RBP31.65■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 RGPD1P0DJD0 1748 aa31.65■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 COL18A1P39060 1754 aa31.65■■■□□ 2.66
TNFSF12-TNFSF13-201ENST00000293826 COL22A1Q8NFW1 1626 aaPredicted RBP31.63■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 AEBP1Q8IUX7 1158 aa31.63■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 APAF1O14727 1248 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 CPDO75976 1380 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 PLEKHF1Q96S99 279 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 EYA1Q99502 592 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 RSPH6AQ9H0K4 717 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 RGPD2P0DJD1 1756 aa31.61■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 SULT6B1Q6IMI4 303 aa31.59■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 RUNDC1Q96C34 613 aa31.59■■■□□ 2.65
TNFSF12-TNFSF13-201ENST00000293826 PRKAR2BP31323 418 aa31.57■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 PRDM11Q9NQV5 511 aa31.57■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 USHBP1Q8N6Y0 703 aa31.56■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 ANKRD24Q8TF21 1146 aa31.56■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 RRP7AQ9Y3A4 280 aaKnown RBP31.56■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 FCHSD2O94868 740 aa31.55■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 IGSF1Q8N6C5 1336 aa31.55■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 NBPF6Q5VWK0 638 aa31.54■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 TCP11L2Q8N4U5 519 aa31.54■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 NBPF4Q96M43 638 aa31.54■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 FAM83GA6ND36 823 aa31.53■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 PHACTR3Q96KR7 559 aa31.53■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 HSPA1LP34931 641 aa31.52■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 LMO7Q8WWI1 1683 aa31.52■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 CAMTA1Q9Y6Y1 1673 aa31.52■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 ERBB3P21860 1342 aa31.52■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 NEUROD2Q15784 382 aa31.52■■■□□ 2.64
TNFSF12-TNFSF13-201ENST00000293826 NUTM2BA6NNL0 878 aaPredicted RBP31.51■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 NUTM2EB1AL46 878 aaPredicted RBP31.51■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 NUTM2AQ8IVF1 878 aaPredicted RBP31.51■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 ABCC6O95255 1503 aa31.48■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 MAPK8IP3Q9UPT6 1336 aa31.48■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 ADAMTS2O95450 1211 aa31.47■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 KDRP35968 1356 aa31.46■■■□□ 2.63
TNFSF12-TNFSF13-201ENST00000293826 JCADQ9P266 1359 aa31.45■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 PNNQ9H307 717 aaKnown RBP31.43■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 CSB-PGBD3P0DP91 1061 aa31.42■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 TMPOP42166 694 aaKnown RBP31.42■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 COL5A2P05997 1499 aaPredicted RBP31.42■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 NLRP2Q9NX02 1062 aa31.41■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 COL14A1Q05707 1796 aaKnown RBP31.4■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 STRN4Q9NRL3 753 aa31.4■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 BTG4Q9NY30 223 aa31.4■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 ZNF521Q96K83 1311 aa31.39■■■□□ 2.62
TNFSF12-TNFSF13-201ENST00000293826 CDCA7LQ96GN5 454 aa31.38■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 FAM208AQ9UK61 1670 aaKnown RBP31.38■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 NEFMP07197 916 aa31.37■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 RIPK4P57078 832 aa31.36■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 DLG5Q8TDM6 1919 aa31.36■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 NFE2L2Q16236 605 aa31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 LARP1Q6PKG0 1096 aaKnown RBP31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 WWC1Q8IX03 1113 aa31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 PLCH1Q4KWH8 1693 aa31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 WDR17Q8IZU2 1322 aa31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 TRIM35Q9UPQ4 493 aa31.35■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 NEFLP07196 543 aa31.34■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 LRP6O75581 1613 aa31.34■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 MTHFSDQ2M296 383 aaKnown RBP31.33■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 PHF23Q9BUL5 403 aaPredicted RBP31.33■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 EVA1CP58658 441 aa31.33■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 SUPT16HQ9Y5B9 1047 aaKnown RBP31.33■■■□□ 2.61
TNFSF12-TNFSF13-201ENST00000293826 TOM1L2Q6ZVM7 507 aa31.32■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 SPINK5Q9NQ38 1064 aaPredicted RBP31.31■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 PDE3BQ13370 1112 aa31.3■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 CCDC27Q2M243 656 aa31.28■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 THUMPD2Q9BTF0 503 aaKnown RBP31.28■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 SPATA31A6Q5VVP1 1343 aa31.27■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 MEGF6O75095 1541 aa31.27■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 FKBP8Q14318 412 aa31.27■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 NGEFQ8N5V2 710 aa31.27■■■□□ 2.6
TNFSF12-TNFSF13-201ENST00000293826 DCTN1Q14203 1278 aa31.26■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 C8orf37Q96NL8 207 aa31.26■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 USP35Q9P2H5 1018 aa31.26■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 NRAPQ86VF7 1730 aa31.26■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 GOLGA2Q08379 1002 aa31.25■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 PELP1Q8IZL8 1130 aaKnown RBP31.25■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 CRB1P82279 1406 aa31.22■■■□□ 2.59
TNFSF12-TNFSF13-201ENST00000293826 NCBP3Q53F19 620 aaKnown RBP31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms