RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
TFF1-201ENST00000291527 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
TFF1-201ENST00000291527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.38
TFF1-201ENST00000291527 PROM2Q8N271 834 aa12.65□□□□□ -0.38
TFF1-201ENST00000291527 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
TFF1-201ENST00000291527 NME9Q86XW9 330 aa12.64□□□□□ -0.39
TFF1-201ENST00000291527 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
TFF1-201ENST00000291527 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
TFF1-201ENST00000291527 KAT6BQ8WYB5 2073 aa12.64□□□□□ -0.39
TFF1-201ENST00000291527 BRD4O60885 1362 aaPredicted RBP12.64□□□□□ -0.39
TFF1-201ENST00000291527 LTN1O94822 1766 aa12.64□□□□□ -0.39
TFF1-201ENST00000291527 WDR17Q8IZU2 1322 aa12.63□□□□□ -0.39
TFF1-201ENST00000291527 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
TFF1-201ENST00000291527 UTRNP46939 3433 aa12.62□□□□□ -0.39
TFF1-201ENST00000291527 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
TFF1-201ENST00000291527 FBLN1P23142 703 aa12.62□□□□□ -0.39
TFF1-201ENST00000291527 KCNQ2O43526 872 aa12.61□□□□□ -0.39
TFF1-201ENST00000291527 DDB1Q16531 1140 aa12.61□□□□□ -0.39
TFF1-201ENST00000291527 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
TFF1-201ENST00000291527 CARD10Q9BWT7 1032 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 CARD11Q9BXL7 1154 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 USP54Q70EL1 1684 aa12.6□□□□□ -0.39
TFF1-201ENST00000291527 CASZ1Q86V15 1759 aa12.59□□□□□ -0.39
TFF1-201ENST00000291527 TMC1Q8TDI8 760 aa12.59□□□□□ -0.39
TFF1-201ENST00000291527 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
TFF1-201ENST00000291527 PARD3Q8TEW0 1356 aa12.58□□□□□ -0.4
TFF1-201ENST00000291527 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
TFF1-201ENST00000291527 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
TFF1-201ENST00000291527 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
TFF1-201ENST00000291527 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
TFF1-201ENST00000291527 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
TFF1-201ENST00000291527 ACSBG1Q96GR2 724 aa12.57□□□□□ -0.4
TFF1-201ENST00000291527 TESK2Q96S53 571 aa12.57□□□□□ -0.4
TFF1-201ENST00000291527 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
TFF1-201ENST00000291527 A0A1W2PP64 1363 aa12.56□□□□□ -0.4
TFF1-201ENST00000291527 PLSCR1O15162 318 aa12.56□□□□□ -0.4
TFF1-201ENST00000291527 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
TFF1-201ENST00000291527 BTAF1O14981 1849 aa12.55□□□□□ -0.4
TFF1-201ENST00000291527 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 EXOC5O00471 708 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 ANKRD24Q8TF21 1146 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 NLRP2Q9NX02 1062 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 ERBB3P21860 1342 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 NHSQ6T4R5 1651 aa12.54□□□□□ -0.4
TFF1-201ENST00000291527 ZBTB7AO95365 584 aa12.53□□□□□ -0.4
TFF1-201ENST00000291527 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
TFF1-201ENST00000291527 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
TFF1-201ENST00000291527 MYOM1P52179 1685 aa12.53□□□□□ -0.4
TFF1-201ENST00000291527 GOLGB1Q14789 3259 aaKnown RBP12.53□□□□□ -0.4
TFF1-201ENST00000291527 BCL9O00512 1426 aa12.53□□□□□ -0.4
TFF1-201ENST00000291527 TNS2Q63HR2 1409 aa12.53□□□□□ -0.4
TFF1-201ENST00000291527 SHANK3Q9BYB0 1731 aa12.52□□□□□ -0.41
TFF1-201ENST00000291527 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
TFF1-201ENST00000291527 EDC4Q6P2E9 1401 aaKnown RBP12.52□□□□□ -0.41
TFF1-201ENST00000291527 PTGER2P43116 358 aa12.51□□□□□ -0.41
TFF1-201ENST00000291527 KCNQ4P56696 695 aa12.51□□□□□ -0.41
TFF1-201ENST00000291527 SPON1Q9HCB6 807 aa12.51□□□□□ -0.41
TFF1-201ENST00000291527 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
TFF1-201ENST00000291527 CCDC7Q96M83 1385 aa12.51□□□□□ -0.41
TFF1-201ENST00000291527 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
TFF1-201ENST00000291527 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
TFF1-201ENST00000291527 LRRC4BQ9NT99 713 aa12.5□□□□□ -0.41
TFF1-201ENST00000291527 ABCC6O95255 1503 aa12.5□□□□□ -0.41
TFF1-201ENST00000291527 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
TFF1-201ENST00000291527 FAM208AQ9UK61 1670 aaKnown RBP12.5□□□□□ -0.41
TFF1-201ENST00000291527 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
TFF1-201ENST00000291527 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
TFF1-201ENST00000291527 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
TFF1-201ENST00000291527 IP6K1Q92551 441 aa12.49□□□□□ -0.41
TFF1-201ENST00000291527 IL2RBP14784 551 aa12.48□□□□□ -0.41
TFF1-201ENST00000291527 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
TFF1-201ENST00000291527 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
TFF1-201ENST00000291527 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
TFF1-201ENST00000291527 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
TFF1-201ENST00000291527 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
TFF1-201ENST00000291527 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 HOXC9P31274 260 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 GGNBP2Q9H3C7 697 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
TFF1-201ENST00000291527 FYB1O15117 783 aa12.45□□□□□ -0.42
TFF1-201ENST00000291527 PUS7Q96PZ0 661 aaKnown RBP12.45□□□□□ -0.42
TFF1-201ENST00000291527 MEGF6O75095 1541 aa12.45□□□□□ -0.42
TFF1-201ENST00000291527 NSD2O96028 1365 aa12.44□□□□□ -0.42
TFF1-201ENST00000291527 NBPF6Q5VWK0 638 aa12.44□□□□□ -0.42
TFF1-201ENST00000291527 NBPF4Q96M43 638 aa12.44□□□□□ -0.42
TFF1-201ENST00000291527 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
TFF1-201ENST00000291527 STK32BQ9NY57 414 aa12.44□□□□□ -0.42
TFF1-201ENST00000291527 YY1P25490 414 aa12.43□□□□□ -0.42
TFF1-201ENST00000291527 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
TFF1-201ENST00000291527 COG3Q96JB2 828 aa12.43□□□□□ -0.42
TFF1-201ENST00000291527 KIF20BQ96Q89 1820 aa12.42□□□□□ -0.42
TFF1-201ENST00000291527 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
TFF1-201ENST00000291527 FHDC1Q9C0D6 1143 aaPredicted RBP12.42□□□□□ -0.42
TFF1-201ENST00000291527 LY75O60449 1722 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms