RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 KIAA0232Q92628 1395 aa18.84■□□□□ 0.61
PSMB4-201ENST00000290541 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
PSMB4-201ENST00000290541 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
PSMB4-201ENST00000290541 ATP7BP35670 1465 aa18.84■□□□□ 0.61
PSMB4-201ENST00000290541 PAPPAQ13219 1627 aa18.83■□□□□ 0.61
PSMB4-201ENST00000290541 C11orf95C9JLR9 678 aaPredicted RBP18.83■□□□□ 0.6
PSMB4-201ENST00000290541 MSH5O43196 834 aa18.83■□□□□ 0.6
PSMB4-201ENST00000290541 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
PSMB4-201ENST00000290541 WDR90Q96KV7 1748 aa18.81■□□□□ 0.6
PSMB4-201ENST00000290541 APLP1P51693 650 aa18.81■□□□□ 0.6
PSMB4-201ENST00000290541 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
PSMB4-201ENST00000290541 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
PSMB4-201ENST00000290541 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
PSMB4-201ENST00000290541 LMO7Q8WWI1 1683 aa18.81■□□□□ 0.6
PSMB4-201ENST00000290541 MINK1Q8N4C8 1332 aaPredicted RBP18.8■□□□□ 0.6
PSMB4-201ENST00000290541 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
PSMB4-201ENST00000290541 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.66e-7■□□□□ 9.5
PSMB4-201ENST00000290541 TCP11L2Q8N4U5 519 aa18.79■□□□□ 0.6
PSMB4-201ENST00000290541 PMFBP1Q8TBY8 1022 aa18.78■□□□□ 0.6
PSMB4-201ENST00000290541 USP47Q96K76 1375 aa18.78■□□□□ 0.6
PSMB4-201ENST00000290541 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
PSMB4-201ENST00000290541 TXNRD1Q16881 649 aa18.77■□□□□ 0.6
PSMB4-201ENST00000290541 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
PSMB4-201ENST00000290541 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
PSMB4-201ENST00000290541 ANKARQ7Z5J8 1434 aa18.76■□□□□ 0.59
PSMB4-201ENST00000290541 LARP1Q6PKG0 1096 aaKnown RBP18.76■□□□□ 0.59
PSMB4-201ENST00000290541 AATKQ6ZMQ8 1374 aa18.76■□□□□ 0.59
PSMB4-201ENST00000290541 AKAP12Q02952 1782 aa18.76■□□□□ 0.59
PSMB4-201ENST00000290541 WNK3Q9BYP7 1800 aa18.75■□□□□ 0.59
PSMB4-201ENST00000290541 GRIN3BO60391 1043 aa18.75■□□□□ 0.59
PSMB4-201ENST00000290541 EIF3AQ14152 1382 aaKnown RBP18.75■□□□□ 0.59
PSMB4-201ENST00000290541 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
PSMB4-201ENST00000290541 THRAP3Q9Y2W1 955 aaKnown RBP18.74■□□□□ 0.59
PSMB4-201ENST00000290541 QSER1Q2KHR3 1735 aa18.74■□□□□ 0.59
PSMB4-201ENST00000290541 KIF3CO14782 793 aa18.73■□□□□ 0.59
PSMB4-201ENST00000290541 HSPA5P11021 654 aaKnown RBP18.73■□□□□ 0.59
PSMB4-201ENST00000290541 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
PSMB4-201ENST00000290541 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
PSMB4-201ENST00000290541 BCL9O00512 1426 aa18.73■□□□□ 0.59
PSMB4-201ENST00000290541 KLHL34Q8N239 644 aa18.72■□□□□ 0.59
PSMB4-201ENST00000290541 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
PSMB4-201ENST00000290541 TESK2Q96S53 571 aa18.72■□□□□ 0.59
PSMB4-201ENST00000290541 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
PSMB4-201ENST00000290541 CDK19Q9BWU1 502 aa18.71■□□□□ 0.59
PSMB4-201ENST00000290541 TULP4Q9NRJ4 1543 aa18.7■□□□□ 0.58
PSMB4-201ENST00000290541 EIF4G2P78344 907 aaKnown RBP eCLIP18.7■□□□□ 0.58
PSMB4-201ENST00000290541 EVA1CP58658 441 aa18.69■□□□□ 0.58
PSMB4-201ENST00000290541 PRR36Q9H6K5 1346 aa18.68■□□□□ 0.58
PSMB4-201ENST00000290541 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
PSMB4-201ENST00000290541 KLRG1Q96E93 195 aa18.67■□□□□ 0.58
PSMB4-201ENST00000290541 CABP2Q9NPB3 220 aa18.67■□□□□ 0.58
PSMB4-201ENST00000290541 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
PSMB4-201ENST00000290541 COL5A2P05997 1499 aaPredicted RBP18.66■□□□□ 0.58
PSMB4-201ENST00000290541 TUBGCP6Q96RT7 1819 aa18.65■□□□□ 0.58
PSMB4-201ENST00000290541 NHSQ6T4R5 1651 aa18.64■□□□□ 0.57
PSMB4-201ENST00000290541 EVC2Q86UK5 1308 aa18.64■□□□□ 0.57
PSMB4-201ENST00000290541 SRPK2P78362 688 aaKnown RBP18.63■□□□□ 0.57
PSMB4-201ENST00000290541 ZNF827Q17R98 1081 aa18.63■□□□□ 0.57
PSMB4-201ENST00000290541 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
PSMB4-201ENST00000290541 WWC3Q9ULE0 1092 aa18.63■□□□□ 0.57
PSMB4-201ENST00000290541 CRB1P82279 1406 aa18.63■□□□□ 0.57
PSMB4-201ENST00000290541 POLD1P28340 1107 aa18.62■□□□□ 0.57
PSMB4-201ENST00000290541 DDB1Q16531 1140 aa18.62■□□□□ 0.57
PSMB4-201ENST00000290541 MARCH10Q8NA82 808 aaPredicted RBP18.62■□□□□ 0.57
PSMB4-201ENST00000290541 CPDO75976 1380 aa18.62■□□□□ 0.57
PSMB4-201ENST00000290541 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
PSMB4-201ENST00000290541 SLC16A10Q8TF71 515 aa18.6■□□□□ 0.57
PSMB4-201ENST00000290541 TMF1P82094 1093 aa18.59■□□□□ 0.57
PSMB4-201ENST00000290541 HTRA3P83110 453 aa18.58■□□□□ 0.56
PSMB4-201ENST00000290541 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
PSMB4-201ENST00000290541 TOMM70O94826 608 aa18.57■□□□□ 0.56
PSMB4-201ENST00000290541 CABP1Q9NZU7 370 aa18.56■□□□□ 0.56
PSMB4-201ENST00000290541 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
PSMB4-201ENST00000290541 ITSN1Q15811 1721 aa18.56■□□□□ 0.56
PSMB4-201ENST00000290541 BTAF1O14981 1849 aa18.56■□□□□ 0.56
PSMB4-201ENST00000290541 TNS2Q63HR2 1409 aa18.54■□□□□ 0.56
PSMB4-201ENST00000290541 PPIP5K1Q6PFW1 1433 aa18.54■□□□□ 0.56
PSMB4-201ENST00000290541 PNPLA7Q6ZV29 1317 aa18.53■□□□□ 0.56
PSMB4-201ENST00000290541 PLEKHG3A1L390 1219 aa18.53■□□□□ 0.56
PSMB4-201ENST00000290541 SLC24A1O60721 1099 aa18.53■□□□□ 0.56
PSMB4-201ENST00000290541 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
PSMB4-201ENST00000290541 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
PSMB4-201ENST00000290541 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
PSMB4-201ENST00000290541 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
PSMB4-201ENST00000290541 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
PSMB4-201ENST00000290541 SLC12A5Q9H2X9 1139 aa18.52■□□□□ 0.56
PSMB4-201ENST00000290541 ACEP12821 1306 aa18.51■□□□□ 0.55
PSMB4-201ENST00000290541 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
PSMB4-201ENST00000290541 CICQ96RK0 1608 aaPredicted RBP18.5■□□□□ 0.55
PSMB4-201ENST00000290541 LRRC4BQ9NT99 713 aa18.5■□□□□ 0.55
PSMB4-201ENST00000290541 USP19O94966 1318 aa18.49■□□□□ 0.55
PSMB4-201ENST00000290541 KIF7Q2M1P5 1343 aa18.49■□□□□ 0.55
PSMB4-201ENST00000290541 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
PSMB4-201ENST00000290541 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
PSMB4-201ENST00000290541 CDCA8Q53HL2 280 aa18.48■□□□□ 0.55
PSMB4-201ENST00000290541 COL18A1P39060 1754 aa18.47■□□□□ 0.55
PSMB4-201ENST00000290541 HSPA1AP0DMV8 641 aaKnown RBP18.47■□□□□ 0.55
PSMB4-201ENST00000290541 HSPA1BP0DMV9 641 aaKnown RBP18.47■□□□□ 0.55
PSMB4-201ENST00000290541 WASHC2AQ641Q2 1341 aa18.47■□□□□ 0.55
PSMB4-201ENST00000290541 BRD4O60885 1362 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms