RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PCGF6Q9BYE7 350 aa14.74□□□□□ -0.05
SNF8-201ENST00000290330 TIMELESSQ9UNS1 1208 aa14.74□□□□□ -0.05
SNF8-201ENST00000290330 A0A1W2PP64 1363 aa14.73□□□□□ -0.05
SNF8-201ENST00000290330 COL18A1P39060 1754 aa14.73□□□□□ -0.05
SNF8-201ENST00000290330 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
SNF8-201ENST00000290330 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
SNF8-201ENST00000290330 EDC4Q6P2E9 1401 aaKnown RBP14.73□□□□□ -0.05
SNF8-201ENST00000290330 NFAT5O94916 1531 aa14.72□□□□□ -0.05
SNF8-201ENST00000290330 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
SNF8-201ENST00000290330 EN1Q05925 392 aaPredicted RBP14.72□□□□□ -0.05
SNF8-201ENST00000290330 USP47Q96K76 1375 aa14.72□□□□□ -0.05
SNF8-201ENST00000290330 NINLQ9Y2I6 1382 aa14.72□□□□□ -0.05
SNF8-201ENST00000290330 TRIM37O94972 964 aa14.71□□□□□ -0.05
SNF8-201ENST00000290330 ADRA2BP18089 450 aa14.71□□□□□ -0.05
SNF8-201ENST00000290330 DISP2A7MBM2 1401 aa14.7□□□□□ -0.06
SNF8-201ENST00000290330 CSB-PGBD3P0DP91 1061 aa14.69□□□□□ -0.06
SNF8-201ENST00000290330 TMF1P82094 1093 aa14.69□□□□□ -0.06
SNF8-201ENST00000290330 RGPD1P0DJD0 1748 aa14.69□□□□□ -0.06
SNF8-201ENST00000290330 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
SNF8-201ENST00000290330 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
SNF8-201ENST00000290330 OVOS2A0A0J9YW53 1432 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 OVOS2Q6IE36 1432 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 ABCC6O95255 1503 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 PARP4Q9UKK3 1724 aaKnown RBP14.67□□□□□ -0.06
SNF8-201ENST00000290330 APBA3O96018 575 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 EZH2Q15910 746 aaKnown RBP14.67□□□□□ -0.06
SNF8-201ENST00000290330 DDB1Q16531 1140 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 CAMKK2Q96RR4 588 aa14.67□□□□□ -0.06
SNF8-201ENST00000290330 CDCA7Q9BWT1 371 aaPredicted RBP14.67□□□□□ -0.06
SNF8-201ENST00000290330 TNS1Q9HBL0 1735 aaKnown RBP14.66□□□□□ -0.06
SNF8-201ENST00000290330 ANKRD36BQ8N2N9 1353 aa14.66□□□□□ -0.06
SNF8-201ENST00000290330 C11orf95C9JLR9 678 aaPredicted RBP14.66□□□□□ -0.06
SNF8-201ENST00000290330 ERBB3P21860 1342 aa14.66□□□□□ -0.06
SNF8-201ENST00000290330 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
SNF8-201ENST00000290330 CCDC7Q96M83 1385 aa14.64□□□□□ -0.07
SNF8-201ENST00000290330 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
SNF8-201ENST00000290330 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
SNF8-201ENST00000290330 LRRC37A3O60309 1634 aa14.63□□□□□ -0.07
SNF8-201ENST00000290330 PSDA5PKW4 1024 aaPredicted RBP14.63□□□□□ -0.07
SNF8-201ENST00000290330 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
SNF8-201ENST00000290330 COG3Q96JB2 828 aa14.63□□□□□ -0.07
SNF8-201ENST00000290330 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
SNF8-201ENST00000290330 ANKRD24Q8TF21 1146 aa14.62□□□□□ -0.07
SNF8-201ENST00000290330 NLRP2Q9NX02 1062 aa14.62□□□□□ -0.07
SNF8-201ENST00000290330 PEAK1Q9H792 1746 aa14.61□□□□□ -0.07
SNF8-201ENST00000290330 EXOC5O00471 708 aa14.61□□□□□ -0.07
SNF8-201ENST00000290330 FYB1O15117 783 aa14.61□□□□□ -0.07
SNF8-201ENST00000290330 CCER1Q8TC90 406 aaPredicted RBP14.61□□□□□ -0.07
SNF8-201ENST00000290330 IP6K1Q92551 441 aa14.61□□□□□ -0.07
SNF8-201ENST00000290330 SRCAPQ6ZRS2 3230 aa14.61□□□□□ -0.07
SNF8-201ENST00000290330 LTN1O94822 1766 aa14.6□□□□□ -0.07
SNF8-201ENST00000290330 BCL9O00512 1426 aa14.6□□□□□ -0.07
SNF8-201ENST00000290330 FBLN1P23142 703 aa14.6□□□□□ -0.07
SNF8-201ENST00000290330 R3HDM1Q15032 1099 aaKnown RBP14.6□□□□□ -0.07
SNF8-201ENST00000290330 MAP3K19Q56UN5 1328 aa14.6□□□□□ -0.07
SNF8-201ENST00000290330 WNK3Q9BYP7 1800 aa14.59□□□□□ -0.07
SNF8-201ENST00000290330 PTF1AQ7RTS3 328 aa14.59□□□□□ -0.07
SNF8-201ENST00000290330 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
SNF8-201ENST00000290330 GGNBP2Q9H3C7 697 aa14.59□□□□□ -0.07
SNF8-201ENST00000290330 IL2RBP14784 551 aa14.58□□□□□ -0.08
SNF8-201ENST00000290330 TNS2Q63HR2 1409 aa14.58□□□□□ -0.08
SNF8-201ENST00000290330 PLSCR1O15162 318 aa14.57□□□□□ -0.08
SNF8-201ENST00000290330 HOXC9P31274 260 aa14.57□□□□□ -0.08
SNF8-201ENST00000290330 AMPHP49418 695 aa14.57□□□□□ -0.08
SNF8-201ENST00000290330 LTV1Q96GA3 475 aaPredicted RBP14.57□□□□□ -0.08
SNF8-201ENST00000290330 CARD14Q9BXL6 1004 aa14.57□□□□□ -0.08
SNF8-201ENST00000290330 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
SNF8-201ENST00000290330 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
SNF8-201ENST00000290330 EIF4G2P78344 907 aaKnown RBP eCLIP14.54□□□□□ -0.08
SNF8-201ENST00000290330 RREB1Q92766 1687 aa14.54□□□□□ -0.08
SNF8-201ENST00000290330 SBF2Q86WG5 1849 aa14.54□□□□□ -0.08
SNF8-201ENST00000290330 RTL1A6NKG5 1358 aa14.53□□□□□ -0.08
SNF8-201ENST00000290330 KCNQ2O43526 872 aa14.53□□□□□ -0.08
SNF8-201ENST00000290330 MYOM1P52179 1685 aa14.52□□□□□ -0.08
SNF8-201ENST00000290330 LRP5O75197 1615 aa14.52□□□□□ -0.08
SNF8-201ENST00000290330 NSD3Q9BZ95 1437 aa14.52□□□□□ -0.08
SNF8-201ENST00000290330 HSPA5P11021 654 aaKnown RBP14.52□□□□□ -0.09
SNF8-201ENST00000290330 PROM2Q8N271 834 aa14.52□□□□□ -0.09
SNF8-201ENST00000290330 NUP188Q5SRE5 1749 aa14.52□□□□□ -0.09
SNF8-201ENST00000290330 HSP90AB2PQ58FF8 381 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 POLR3GLQ9BT43 218 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
SNF8-201ENST00000290330 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
SNF8-201ENST00000290330 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
SNF8-201ENST00000290330 TXNRD1Q16881 649 aa14.49□□□□□ -0.09
SNF8-201ENST00000290330 DDX54Q8TDD1 881 aaKnown RBP14.49□□□□□ -0.09
SNF8-201ENST00000290330 INSRP06213 1382 aa14.48□□□□□ -0.09
SNF8-201ENST00000290330 FLT4P35916 1363 aa14.48□□□□□ -0.09
SNF8-201ENST00000290330 KIF24Q5T7B8 1368 aa14.48□□□□□ -0.09
SNF8-201ENST00000290330 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
SNF8-201ENST00000290330 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
SNF8-201ENST00000290330 CGNL1Q0VF96 1302 aa14.47□□□□□ -0.09
SNF8-201ENST00000290330 ZCRB1Q8TBF4 217 aaKnown RBP14.47□□□□□ -0.09
SNF8-201ENST00000290330 EMILIN1Q9Y6C2 1016 aa14.47□□□□□ -0.09
SNF8-201ENST00000290330 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
SNF8-201ENST00000290330 MEGF6O75095 1541 aa14.46□□□□□ -0.09
SNF8-201ENST00000290330 NHSQ6T4R5 1651 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms