RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 WDR17Q8IZU2 1322 aa13.48□□□□□ -0.25
HMHB1-201ENST00000289448 TOM1L2Q6ZVM7 507 aa13.48□□□□□ -0.25
HMHB1-201ENST00000289448 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
HMHB1-201ENST00000289448 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
HMHB1-201ENST00000289448 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
HMHB1-201ENST00000289448 CAMKK2Q96RR4 588 aa13.47□□□□□ -0.25
HMHB1-201ENST00000289448 PSDA5PKW4 1024 aaPredicted RBP13.46□□□□□ -0.25
HMHB1-201ENST00000289448 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.25
HMHB1-201ENST00000289448 TNS1Q9HBL0 1735 aaKnown RBP13.46□□□□□ -0.25
HMHB1-201ENST00000289448 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.26
HMHB1-201ENST00000289448 APBA3O96018 575 aa13.45□□□□□ -0.26
HMHB1-201ENST00000289448 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
HMHB1-201ENST00000289448 CSB-PGBD3P0DP91 1061 aa13.44□□□□□ -0.26
HMHB1-201ENST00000289448 CARD10Q9BWT7 1032 aa13.44□□□□□ -0.26
HMHB1-201ENST00000289448 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
HMHB1-201ENST00000289448 USP47Q96K76 1375 aa13.44□□□□□ -0.26
HMHB1-201ENST00000289448 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
HMHB1-201ENST00000289448 DDB1Q16531 1140 aa13.43□□□□□ -0.26
HMHB1-201ENST00000289448 PTF1AQ7RTS3 328 aa13.43□□□□□ -0.26
HMHB1-201ENST00000289448 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
HMHB1-201ENST00000289448 PCGF6Q9BYE7 350 aa13.43□□□□□ -0.26
HMHB1-201ENST00000289448 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
HMHB1-201ENST00000289448 OVOS2A0A0J9YW53 1432 aa13.42□□□□□ -0.26
HMHB1-201ENST00000289448 OVOS2Q6IE36 1432 aa13.42□□□□□ -0.26
HMHB1-201ENST00000289448 R3HDM1Q15032 1099 aaKnown RBP13.42□□□□□ -0.26
HMHB1-201ENST00000289448 LRRC37A3O60309 1634 aa13.42□□□□□ -0.26
HMHB1-201ENST00000289448 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
HMHB1-201ENST00000289448 PEAK1Q9H792 1746 aa13.41□□□□□ -0.26
HMHB1-201ENST00000289448 ERBB3P21860 1342 aa13.4□□□□□ -0.26
HMHB1-201ENST00000289448 OVOS2A0A0G2JMS6 1433 aa13.4□□□□□ -0.26
HMHB1-201ENST00000289448 ABCC6O95255 1503 aa13.4□□□□□ -0.26
HMHB1-201ENST00000289448 FBLN1P23142 703 aa13.4□□□□□ -0.26
HMHB1-201ENST00000289448 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.26
HMHB1-201ENST00000289448 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
HMHB1-201ENST00000289448 TMF1P82094 1093 aa13.39□□□□□ -0.27
HMHB1-201ENST00000289448 ANKRD24Q8TF21 1146 aa13.39□□□□□ -0.27
HMHB1-201ENST00000289448 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
HMHB1-201ENST00000289448 ANKRD36BQ8N2N9 1353 aa13.38□□□□□ -0.27
HMHB1-201ENST00000289448 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
HMHB1-201ENST00000289448 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
HMHB1-201ENST00000289448 TIMELESSQ9UNS1 1208 aa13.38□□□□□ -0.27
HMHB1-201ENST00000289448 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
HMHB1-201ENST00000289448 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
HMHB1-201ENST00000289448 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
HMHB1-201ENST00000289448 EXOC5O00471 708 aa13.37□□□□□ -0.27
HMHB1-201ENST00000289448 IP6K1Q92551 441 aa13.37□□□□□ -0.27
HMHB1-201ENST00000289448 BCL9O00512 1426 aa13.37□□□□□ -0.27
HMHB1-201ENST00000289448 MAP3K19Q56UN5 1328 aa13.37□□□□□ -0.27
HMHB1-201ENST00000289448 LTN1O94822 1766 aa13.36□□□□□ -0.27
HMHB1-201ENST00000289448 FYB1O15117 783 aa13.36□□□□□ -0.27
HMHB1-201ENST00000289448 COG3Q96JB2 828 aa13.36□□□□□ -0.27
HMHB1-201ENST00000289448 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
HMHB1-201ENST00000289448 LTV1Q96GA3 475 aaPredicted RBP13.35□□□□□ -0.27
HMHB1-201ENST00000289448 CARD14Q9BXL6 1004 aa13.35□□□□□ -0.27
HMHB1-201ENST00000289448 GGNBP2Q9H3C7 697 aa13.35□□□□□ -0.27
HMHB1-201ENST00000289448 RREB1Q92766 1687 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 PLSCR1O15162 318 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 KCNQ2O43526 872 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 IL2RBP14784 551 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 HOXC9P31274 260 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 PROM2Q8N271 834 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 LRP5O75197 1615 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
HMHB1-201ENST00000289448 NUP188Q5SRE5 1749 aa13.33□□□□□ -0.27
HMHB1-201ENST00000289448 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.28
HMHB1-201ENST00000289448 CDCA8Q53HL2 280 aa13.32□□□□□ -0.28
HMHB1-201ENST00000289448 AMPHP49418 695 aa13.31□□□□□ -0.28
HMHB1-201ENST00000289448 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
HMHB1-201ENST00000289448 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
HMHB1-201ENST00000289448 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
HMHB1-201ENST00000289448 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
HMHB1-201ENST00000289448 MYOM1P52179 1685 aa13.28□□□□□ -0.28
HMHB1-201ENST00000289448 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
HMHB1-201ENST00000289448 NBPF6Q5VWK0 638 aa13.28□□□□□ -0.28
HMHB1-201ENST00000289448 NBPF4Q96M43 638 aa13.28□□□□□ -0.28
HMHB1-201ENST00000289448 PDGFDQ9GZP0 370 aaPredicted RBP13.28□□□□□ -0.28
HMHB1-201ENST00000289448 NSD3Q9BZ95 1437 aa13.28□□□□□ -0.28
HMHB1-201ENST00000289448 RGPD3A6NKT7 1758 aaPredicted RBP13.27□□□□□ -0.28
HMHB1-201ENST00000289448 RGPD4Q7Z3J3 1758 aa13.27□□□□□ -0.28
HMHB1-201ENST00000289448 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
HMHB1-201ENST00000289448 DDX54Q8TDD1 881 aaKnown RBP13.27□□□□□ -0.29
HMHB1-201ENST00000289448 RTL1A6NKG5 1358 aa13.27□□□□□ -0.29
HMHB1-201ENST00000289448 HSPA5P11021 654 aaKnown RBP13.26□□□□□ -0.29
HMHB1-201ENST00000289448 USHBP1Q8N6Y0 703 aa13.26□□□□□ -0.29
HMHB1-201ENST00000289448 FAM208AQ9UK61 1670 aaKnown RBP13.25□□□□□ -0.29
HMHB1-201ENST00000289448 MEGF6O75095 1541 aa13.25□□□□□ -0.29
HMHB1-201ENST00000289448 EMILIN1Q9Y6C2 1016 aa13.25□□□□□ -0.29
HMHB1-201ENST00000289448 RGPD2P0DJD1 1756 aa13.25□□□□□ -0.29
HMHB1-201ENST00000289448 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
HMHB1-201ENST00000289448 INSRP06213 1382 aa13.24□□□□□ -0.29
HMHB1-201ENST00000289448 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
HMHB1-201ENST00000289448 ZCRB1Q8TBF4 217 aaKnown RBP13.24□□□□□ -0.29
HMHB1-201ENST00000289448 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
HMHB1-201ENST00000289448 KIF20BQ96Q89 1820 aa13.23□□□□□ -0.29
HMHB1-201ENST00000289448 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
HMHB1-201ENST00000289448 FLT4P35916 1363 aa13.22□□□□□ -0.29
HMHB1-201ENST00000289448 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
HMHB1-201ENST00000289448 SLC15A2Q16348 729 aa13.22□□□□□ -0.29
HMHB1-201ENST00000289448 SPON1Q9HCB6 807 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms