RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 PARD3Q8TEW0 1356 aa21.63■■□□□ 1.05
PDE6D-201ENST00000287600 LRRC37A3O60309 1634 aa21.63■■□□□ 1.05
PDE6D-201ENST00000287600 CLSPNQ9HAW4 1339 aa21.63■■□□□ 1.05
PDE6D-201ENST00000287600 CAMKK2Q96RR4 588 aa21.63■■□□□ 1.05
PDE6D-201ENST00000287600 AATKQ6ZMQ8 1374 aa21.62■■□□□ 1.05
PDE6D-201ENST00000287600 WNK3Q9BYP7 1800 aa21.62■■□□□ 1.05
PDE6D-201ENST00000287600 NUP188Q5SRE5 1749 aa21.62■■□□□ 1.05
PDE6D-201ENST00000287600 COL18A1P39060 1754 aa21.61■■□□□ 1.05
PDE6D-201ENST00000287600 CPSF1Q10570 1443 aaKnown RBP21.61■■□□□ 1.05
PDE6D-201ENST00000287600 TTC21BQ7Z4L5 1316 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 OVOS2A0A0G2JMS6 1433 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 OVOS2A0A0J9YW53 1432 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 OVOS2Q6IE36 1432 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 TOM1L2Q6ZVM7 507 aa21.58■■□□□ 1.05
PDE6D-201ENST00000287600 ZNF692Q9BU19 519 aaPredicted RBP21.58■■□□□ 1.05
PDE6D-201ENST00000287600 PEAK1Q9H792 1746 aa21.58■■□□□ 1.04
PDE6D-201ENST00000287600 RGPD5Q99666 1765 aa21.57■■□□□ 1.04
PDE6D-201ENST00000287600 SOX12O15370 315 aa21.57■■□□□ 1.04
PDE6D-201ENST00000287600 TTC21AQ8NDW8 1320 aa21.56■■□□□ 1.04
PDE6D-201ENST00000287600 KCNH5Q8NCM2 988 aa21.56■■□□□ 1.04
PDE6D-201ENST00000287600 KTN1Q86UP2 1357 aaKnown RBP21.56■■□□□ 1.04
PDE6D-201ENST00000287600 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
PDE6D-201ENST00000287600 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
PDE6D-201ENST00000287600 TIMELESSQ9UNS1 1208 aa21.55■■□□□ 1.04
PDE6D-201ENST00000287600 WDR17Q8IZU2 1322 aa21.55■■□□□ 1.04
PDE6D-201ENST00000287600 SBF2Q86WG5 1849 aa21.54■■□□□ 1.04
PDE6D-201ENST00000287600 NFAT5O94916 1531 aa21.54■■□□□ 1.04
PDE6D-201ENST00000287600 SBNO2Q9Y2G9 1366 aa21.53■■□□□ 1.04
PDE6D-201ENST00000287600 DDB1Q16531 1140 aa21.53■■□□□ 1.04
PDE6D-201ENST00000287600 AXIN2Q9Y2T1 843 aa21.53■■□□□ 1.04
PDE6D-201ENST00000287600 RGPD3A6NKT7 1758 aaPredicted RBP21.53■■□□□ 1.04
PDE6D-201ENST00000287600 RGPD4Q7Z3J3 1758 aa21.53■■□□□ 1.04
PDE6D-201ENST00000287600 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.04
PDE6D-201ENST00000287600 NBPF14Q5TI25 921 aa21.52■■□□□ 1.04
PDE6D-201ENST00000287600 ARHGEF25Q86VW2 580 aa21.52■■□□□ 1.04
PDE6D-201ENST00000287600 ABCC6O95255 1503 aa21.5■■□□□ 1.03
PDE6D-201ENST00000287600 USP54Q70EL1 1684 aa21.5■■□□□ 1.03
PDE6D-201ENST00000287600 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.48■■□□□ 1.03
PDE6D-201ENST00000287600 CDCA7Q9BWT1 371 aaPredicted RBP21.48■■□□□ 1.03
PDE6D-201ENST00000287600 LTN1O94822 1766 aa21.47■■□□□ 1.03
PDE6D-201ENST00000287600 CD163L1Q9NR16 1453 aa21.46■■□□□ 1.03
PDE6D-201ENST00000287600 TMC1Q8TDI8 760 aa21.46■■□□□ 1.03
PDE6D-201ENST00000287600 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
PDE6D-201ENST00000287600 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
PDE6D-201ENST00000287600 MARCH10Q8NA82 808 aaPredicted RBP21.44■■□□□ 1.02
PDE6D-201ENST00000287600 USP31Q70CQ4 1352 aa21.44■■□□□ 1.02
PDE6D-201ENST00000287600 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
PDE6D-201ENST00000287600 BCL11BQ9C0K0 894 aaPredicted RBP21.43■■□□□ 1.02
PDE6D-201ENST00000287600 BCL9O00512 1426 aa21.42■■□□□ 1.02
PDE6D-201ENST00000287600 TNS2Q63HR2 1409 aa21.42■■□□□ 1.02
PDE6D-201ENST00000287600 NME9Q86XW9 330 aa21.42■■□□□ 1.02
PDE6D-201ENST00000287600 EDC4Q6P2E9 1401 aaKnown RBP21.41■■□□□ 1.02
PDE6D-201ENST00000287600 PLSCR1O15162 318 aa21.41■■□□□ 1.02
PDE6D-201ENST00000287600 EXOC5O00471 708 aa21.4■■□□□ 1.02
PDE6D-201ENST00000287600 PTF1AQ7RTS3 328 aa21.4■■□□□ 1.02
PDE6D-201ENST00000287600 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
PDE6D-201ENST00000287600 ERBB3P21860 1342 aa21.39■■□□□ 1.01
PDE6D-201ENST00000287600 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.01
PDE6D-201ENST00000287600 TERF2IPQ9NYB0 399 aa21.38■■□□□ 1.01
PDE6D-201ENST00000287600 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
PDE6D-201ENST00000287600 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
PDE6D-201ENST00000287600 ANO8Q9HCE9 1232 aaPredicted RBP21.37■■□□□ 1.01
PDE6D-201ENST00000287600 NLRP2Q9NX02 1062 aa21.37■■□□□ 1.01
PDE6D-201ENST00000287600 PPP1R1BQ9UD71 204 aaPredicted RBP21.37■■□□□ 1.01
PDE6D-201ENST00000287600 CASZ1Q86V15 1759 aa21.37■■□□□ 1.01
PDE6D-201ENST00000287600 ST20-MTHFSA0A0A6YYL1 179 aa21.36■■□□□ 1.01
PDE6D-201ENST00000287600 KCNQ2O43526 872 aa21.35■■□□□ 1.01
PDE6D-201ENST00000287600 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
PDE6D-201ENST00000287600 PUS7Q96PZ0 661 aaKnown RBP21.33■■□□□ 1.01
PDE6D-201ENST00000287600 FAM208AQ9UK61 1670 aaKnown RBP21.33■■□□□ 1
PDE6D-201ENST00000287600 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
PDE6D-201ENST00000287600 IL2RBP14784 551 aa21.32■■□□□ 1
PDE6D-201ENST00000287600 USP47Q96K76 1375 aa21.32■■□□□ 1
PDE6D-201ENST00000287600 TESK2Q96S53 571 aa21.31■■□□□ 1
PDE6D-201ENST00000287600 TXNRD1Q16881 649 aa21.3■■□□□ 1
PDE6D-201ENST00000287600 PROM2Q8N271 834 aa21.3■■□□□ 1
PDE6D-201ENST00000287600 ACSBG1Q96GR2 724 aa21.3■■□□□ 1
PDE6D-201ENST00000287600 STK32BQ9NY57 414 aa21.29■■□□□ 1
PDE6D-201ENST00000287600 BTAF1O14981 1849 aa21.29■■□□□ 1
PDE6D-201ENST00000287600 SLC24A1O60721 1099 aa21.28■■□□□ 1
PDE6D-201ENST00000287600 MYOM1P52179 1685 aa21.26■□□□□ 0.99
PDE6D-201ENST00000287600 ZBTB7AO95365 584 aa21.26■□□□□ 0.99
PDE6D-201ENST00000287600 PDGFDQ9GZP0 370 aaPredicted RBP21.26■□□□□ 0.99
PDE6D-201ENST00000287600 IP6K1Q92551 441 aa21.25■□□□□ 0.99
PDE6D-201ENST00000287600 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
PDE6D-201ENST00000287600 COG3Q96JB2 828 aa21.25■□□□□ 0.99
PDE6D-201ENST00000287600 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
PDE6D-201ENST00000287600 PAPPAQ13219 1627 aa21.24■□□□□ 0.99
PDE6D-201ENST00000287600 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
PDE6D-201ENST00000287600 ANKRD36BQ8N2N9 1353 aa21.23■□□□□ 0.99
PDE6D-201ENST00000287600 TMF1P82094 1093 aa21.23■□□□□ 0.99
PDE6D-201ENST00000287600 MAP3K19Q56UN5 1328 aa21.22■□□□□ 0.99
PDE6D-201ENST00000287600 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
PDE6D-201ENST00000287600 AMPHP49418 695 aa21.21■□□□□ 0.99
PDE6D-201ENST00000287600 YY1P25490 414 aa21.2■□□□□ 0.98
PDE6D-201ENST00000287600 ATF5Q9Y2D1 282 aaPredicted RBP21.2■□□□□ 0.98
PDE6D-201ENST00000287600 DOT1LQ8TEK3 1739 aa21.2■□□□□ 0.98
PDE6D-201ENST00000287600 HOXC9P31274 260 aa21.19■□□□□ 0.98
PDE6D-201ENST00000287600 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms