RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 PLSCR1O15162 318 aa15.58■□□□□ 0.08
NSMCE2-201ENST00000287437 CABP1Q9NZU7 370 aa15.58■□□□□ 0.08
NSMCE2-201ENST00000287437 BRD4O60885 1362 aaPredicted RBP15.58■□□□□ 0.08
NSMCE2-201ENST00000287437 RGPD3A6NKT7 1758 aaPredicted RBP15.57■□□□□ 0.08
NSMCE2-201ENST00000287437 RGPD4Q7Z3J3 1758 aa15.57■□□□□ 0.08
NSMCE2-201ENST00000287437 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
NSMCE2-201ENST00000287437 PDGFDQ9GZP0 370 aaPredicted RBP15.57■□□□□ 0.08
NSMCE2-201ENST00000287437 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
NSMCE2-201ENST00000287437 AXIN2Q9Y2T1 843 aa15.56■□□□□ 0.08
NSMCE2-201ENST00000287437 QRICH2Q9H0J4 1663 aa15.56■□□□□ 0.08
NSMCE2-201ENST00000287437 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
NSMCE2-201ENST00000287437 CASZ1Q86V15 1759 aa15.55■□□□□ 0.08
NSMCE2-201ENST00000287437 PIK3C2AO00443 1686 aa15.55■□□□□ 0.08
NSMCE2-201ENST00000287437 WDR17Q8IZU2 1322 aa15.55■□□□□ 0.08
NSMCE2-201ENST00000287437 MARCH10Q8NA82 808 aaPredicted RBP15.55■□□□□ 0.08
NSMCE2-201ENST00000287437 ZBTB7AO95365 584 aa15.54■□□□□ 0.08
NSMCE2-201ENST00000287437 PROM2Q8N271 834 aa15.54■□□□□ 0.08
NSMCE2-201ENST00000287437 COL18A1P39060 1754 aa15.54■□□□□ 0.08
NSMCE2-201ENST00000287437 CPSF1Q10570 1443 aaKnown RBP15.53■□□□□ 0.08
NSMCE2-201ENST00000287437 WNK3Q9BYP7 1800 aa15.53■□□□□ 0.08
NSMCE2-201ENST00000287437 SOX12O15370 315 aa15.52■□□□□ 0.08
NSMCE2-201ENST00000287437 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
NSMCE2-201ENST00000287437 BCL9O00512 1426 aa15.51■□□□□ 0.07
NSMCE2-201ENST00000287437 ARHGEF25Q86VW2 580 aa15.51■□□□□ 0.07
NSMCE2-201ENST00000287437 CDCA7Q9BWT1 371 aaPredicted RBP15.51■□□□□ 0.07
NSMCE2-201ENST00000287437 MYOM1P52179 1685 aa15.51■□□□□ 0.07
NSMCE2-201ENST00000287437 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
NSMCE2-201ENST00000287437 PTGER2P43116 358 aa15.5■□□□□ 0.07
NSMCE2-201ENST00000287437 TXNRD1Q16881 649 aa15.5■□□□□ 0.07
NSMCE2-201ENST00000287437 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
NSMCE2-201ENST00000287437 AKAP12Q02952 1782 aa15.49■□□□□ 0.07
NSMCE2-201ENST00000287437 TTC21BQ7Z4L5 1316 aa15.49■□□□□ 0.07
NSMCE2-201ENST00000287437 EVC2Q86UK5 1308 aa15.49■□□□□ 0.07
NSMCE2-201ENST00000287437 CARD10Q9BWT7 1032 aa15.49■□□□□ 0.07
NSMCE2-201ENST00000287437 STK32BQ9NY57 414 aa15.49■□□□□ 0.07
NSMCE2-201ENST00000287437 UTRNP46939 3433 aa15.48■□□□□ 0.07
NSMCE2-201ENST00000287437 KCNH5Q8NCM2 988 aa15.48■□□□□ 0.07
NSMCE2-201ENST00000287437 EXOC5O00471 708 aa15.47■□□□□ 0.07
NSMCE2-201ENST00000287437 SLC15A2Q16348 729 aa15.47■□□□□ 0.07
NSMCE2-201ENST00000287437 RGPD5Q99666 1765 aa15.47■□□□□ 0.07
NSMCE2-201ENST00000287437 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 TNS2Q63HR2 1409 aa15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 FHDC1Q9C0D6 1143 aaPredicted RBP15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 NFAT5O94916 1531 aa15.46■□□□□ 0.07
NSMCE2-201ENST00000287437 KCNA4P22459 653 aa15.45■□□□□ 0.06
NSMCE2-201ENST00000287437 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
NSMCE2-201ENST00000287437 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
NSMCE2-201ENST00000287437 SYT17Q9BSW7 474 aa15.45■□□□□ 0.06
NSMCE2-201ENST00000287437 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
NSMCE2-201ENST00000287437 TTC21AQ8NDW8 1320 aa15.44■□□□□ 0.06
NSMCE2-201ENST00000287437 ZNF784Q8NCA9 323 aaPredicted RBP15.44■□□□□ 0.06
NSMCE2-201ENST00000287437 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
NSMCE2-201ENST00000287437 ACSBG1Q96GR2 724 aa15.43■□□□□ 0.06
NSMCE2-201ENST00000287437 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
NSMCE2-201ENST00000287437 NHSQ6T4R5 1651 aa15.42■□□□□ 0.06
NSMCE2-201ENST00000287437 SGIP1Q9BQI5 828 aa15.42■□□□□ 0.06
NSMCE2-201ENST00000287437 ABCC6O95255 1503 aa15.42■□□□□ 0.06
NSMCE2-201ENST00000287437 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
NSMCE2-201ENST00000287437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■■■□□ 16.6
NSMCE2-201ENST00000287437 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
NSMCE2-201ENST00000287437 ERBB3P21860 1342 aa15.4■□□□□ 0.06
NSMCE2-201ENST00000287437 PAPPAQ13219 1627 aa15.39■□□□□ 0.05
NSMCE2-201ENST00000287437 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
NSMCE2-201ENST00000287437 IL2RBP14784 551 aa15.38■□□□□ 0.05
NSMCE2-201ENST00000287437 ZNF827Q17R98 1081 aa15.38■□□□□ 0.05
NSMCE2-201ENST00000287437 ARXQ96QS3 562 aa15.38■□□□□ 0.05
NSMCE2-201ENST00000287437 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
NSMCE2-201ENST00000287437 NME9Q86XW9 330 aa15.37■□□□□ 0.05
NSMCE2-201ENST00000287437 SIN3AQ96ST3 1273 aa15.37■□□□□ 0.05
NSMCE2-201ENST00000287437 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
NSMCE2-201ENST00000287437 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 LRRC4BQ9NT99 713 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 BTAF1O14981 1849 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 MAP3K5Q99683 1374 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 SBNO2Q9Y2G9 1366 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 USP54Q70EL1 1684 aa15.35■□□□□ 0.05
NSMCE2-201ENST00000287437 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
NSMCE2-201ENST00000287437 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
NSMCE2-201ENST00000287437 LTN1O94822 1766 aa15.34■□□□□ 0.05
NSMCE2-201ENST00000287437 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
NSMCE2-201ENST00000287437 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
NSMCE2-201ENST00000287437 TMC1Q8TDI8 760 aa15.32■□□□□ 0.04
NSMCE2-201ENST00000287437 C1QTNF8P60827 252 aa15.31■□□□□ 0.04
NSMCE2-201ENST00000287437 GPR162Q16538 588 aa15.31■□□□□ 0.04
NSMCE2-201ENST00000287437 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
NSMCE2-201ENST00000287437 CHD4Q14839 1912 aa15.31■□□□□ 0.04
NSMCE2-201ENST00000287437 GOLGB1Q14789 3259 aaKnown RBP15.3■□□□□ 0.04
NSMCE2-201ENST00000287437 HDGFL2Q7Z4V5 671 aaPredicted RBP15.3■□□□□ 0.04
NSMCE2-201ENST00000287437 DDX54Q8TDD1 881 aaKnown RBP15.3■□□□□ 0.04
NSMCE2-201ENST00000287437 SLC12A5Q9H2X9 1139 aa15.3■□□□□ 0.04
NSMCE2-201ENST00000287437 EDC4Q6P2E9 1401 aaKnown RBP15.29■□□□□ 0.04
NSMCE2-201ENST00000287437 PNPLA7Q6ZV29 1317 aa15.29■□□□□ 0.04
NSMCE2-201ENST00000287437 KCNQ4P56696 695 aa15.29■□□□□ 0.04
NSMCE2-201ENST00000287437 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
NSMCE2-201ENST00000287437 POLD1P28340 1107 aa15.28■□□□□ 0.04
NSMCE2-201ENST00000287437 SLC27A3Q5K4L6 730 aa15.28■□□□□ 0.04
NSMCE2-201ENST00000287437 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
NSMCE2-201ENST00000287437 A0A1W2PP64 1363 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms