RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CC2D1BQ5T0F9 858 aaKnown RBP23.88■■□□□ 1.41
ATG3-201ENST00000283290 RGS12O14924 1447 aa23.87■■□□□ 1.41
ATG3-201ENST00000283290 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
ATG3-201ENST00000283290 VPS72Q15906 364 aa23.87■■□□□ 1.41
ATG3-201ENST00000283290 GJD4Q96KN9 370 aaPredicted RBP23.87■■□□□ 1.41
ATG3-201ENST00000283290 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
ATG3-201ENST00000283290 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
ATG3-201ENST00000283290 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
ATG3-201ENST00000283290 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
ATG3-201ENST00000283290 ARHGEF25Q86VW2 580 aa23.86■■□□□ 1.41
ATG3-201ENST00000283290 CCDC9Q9Y3X0 531 aaKnown RBP23.86■■□□□ 1.41
ATG3-201ENST00000283290 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
ATG3-201ENST00000283290 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
ATG3-201ENST00000283290 AXIN2Q9Y2T1 843 aa23.83■■□□□ 1.41
ATG3-201ENST00000283290 COL5A2P05997 1499 aaPredicted RBP23.83■■□□□ 1.4
ATG3-201ENST00000283290 PEAK1Q9H792 1746 aa23.82■■□□□ 1.4
ATG3-201ENST00000283290 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
ATG3-201ENST00000283290 EVA1CP58658 441 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 ABCC6O95255 1503 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 SPATA31A5Q5VU36 1347 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 SPATA31A7Q8IWB4 1347 aa23.79■■□□□ 1.4
ATG3-201ENST00000283290 LARP1Q6PKG0 1096 aaKnown RBP23.78■■□□□ 1.4
ATG3-201ENST00000283290 BRWD3Q6RI45 1802 aa23.78■■□□□ 1.4
ATG3-201ENST00000283290 SOCS7O14512 581 aa23.78■■□□□ 1.4
ATG3-201ENST00000283290 PPM1GO15355 546 aaPredicted RBP23.78■■□□□ 1.4
ATG3-201ENST00000283290 RGPD2P0DJD1 1756 aa23.76■■□□□ 1.39
ATG3-201ENST00000283290 SPATA31A1Q5TZJ5 1347 aa23.76■■□□□ 1.39
ATG3-201ENST00000283290 NSD2O96028 1365 aa23.76■■□□□ 1.39
ATG3-201ENST00000283290 AMPHP49418 695 aa23.75■■□□□ 1.39
ATG3-201ENST00000283290 LTV1Q96GA3 475 aaPredicted RBP23.75■■□□□ 1.39
ATG3-201ENST00000283290 FAM98CQ17RN3 349 aaKnown RBP23.74■■□□□ 1.39
ATG3-201ENST00000283290 USP35Q9P2H5 1018 aa23.74■■□□□ 1.39
ATG3-201ENST00000283290 THSD7AQ9UPZ6 1657 aa23.72■■□□□ 1.39
ATG3-201ENST00000283290 CRB1P82279 1406 aa23.72■■□□□ 1.39
ATG3-201ENST00000283290 HOXC9P31274 260 aa23.72■■□□□ 1.39
ATG3-201ENST00000283290 POLKQ9UBT6 870 aa23.72■■□□□ 1.39
ATG3-201ENST00000283290 SEPT12Q8IYM1 358 aa23.71■■□□□ 1.39
ATG3-201ENST00000283290 WDR17Q8IZU2 1322 aa23.7■■□□□ 1.39
ATG3-201ENST00000283290 ONECUT3O60422 494 aaPredicted RBP23.7■■□□□ 1.38
ATG3-201ENST00000283290 HSP90AB2PQ58FF8 381 aa23.7■■□□□ 1.38
ATG3-201ENST00000283290 WNK3Q9BYP7 1800 aa23.7■■□□□ 1.38
ATG3-201ENST00000283290 A0A0G2JS52 829 aa23.69■■□□□ 1.38
ATG3-201ENST00000283290 CSB-PGBD3P0DP91 1061 aa23.69■■□□□ 1.38
ATG3-201ENST00000283290 MYT1Q01538 1121 aa23.69■■□□□ 1.38
ATG3-201ENST00000283290 IP6K1Q92551 441 aa23.69■■□□□ 1.38
ATG3-201ENST00000283290 TOM1L2Q6ZVM7 507 aa23.69■■□□□ 1.38
ATG3-201ENST00000283290 ANKRD24Q8TF21 1146 aa23.68■■□□□ 1.38
ATG3-201ENST00000283290 BLMP54132 1417 aaPredicted RBP23.68■■□□□ 1.38
ATG3-201ENST00000283290 ERBB3P21860 1342 aa23.67■■□□□ 1.38
ATG3-201ENST00000283290 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
ATG3-201ENST00000283290 EP400Q96L91 3159 aa23.67■■□□□ 1.38
ATG3-201ENST00000283290 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
ATG3-201ENST00000283290 RTL1A6NKG5 1358 aa23.66■■□□□ 1.38
ATG3-201ENST00000283290 FAM208AQ9UK61 1670 aaKnown RBP23.65■■□□□ 1.38
ATG3-201ENST00000283290 FLT4P35916 1363 aa23.65■■□□□ 1.38
ATG3-201ENST00000283290 BARGINQ6ZT62 677 aa23.64■■□□□ 1.37
ATG3-201ENST00000283290 PARP4Q9UKK3 1724 aaKnown RBP23.63■■□□□ 1.37
ATG3-201ENST00000283290 MTHFSP49914 203 aa23.63■■□□□ 1.37
ATG3-201ENST00000283290 NLRP2Q9NX02 1062 aa23.63■■□□□ 1.37
ATG3-201ENST00000283290 THRAP3Q9Y2W1 955 aaKnown RBP23.63■■□□□ 1.37
ATG3-201ENST00000283290 USHBP1Q8N6Y0 703 aa23.62■■□□□ 1.37
ATG3-201ENST00000283290 CARD10Q9BWT7 1032 aa23.62■■□□□ 1.37
ATG3-201ENST00000283290 LRRC37A3O60309 1634 aa23.6■■□□□ 1.37
ATG3-201ENST00000283290 INSRP06213 1382 aa23.6■■□□□ 1.37
ATG3-201ENST00000283290 SMG6Q86US8 1419 aaKnown RBP23.6■■□□□ 1.37
ATG3-201ENST00000283290 KRT27Q7Z3Y8 459 aa23.6■■□□□ 1.37
ATG3-201ENST00000283290 KIF24Q5T7B8 1368 aa23.59■■□□□ 1.37
ATG3-201ENST00000283290 PPP2R1AP30153 589 aa23.58■■□□□ 1.37
ATG3-201ENST00000283290 PARD3Q8TEW0 1356 aa23.58■■□□□ 1.36
ATG3-201ENST00000283290 EIF4A2Q14240 407 aaKnown RBP23.57■■□□□ 1.36
ATG3-201ENST00000283290 NBPF6Q5VWK0 638 aa23.57■■□□□ 1.36
ATG3-201ENST00000283290 UPF1Q92900 1129 aaKnown RBP eCLIP23.57■■□□□ 1.36
ATG3-201ENST00000283290 NBPF4Q96M43 638 aa23.57■■□□□ 1.36
ATG3-201ENST00000283290 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
ATG3-201ENST00000283290 FAM182BQ5T319 152 aa23.56■■□□□ 1.36
ATG3-201ENST00000283290 EYA1Q99502 592 aa23.52■■□□□ 1.36
ATG3-201ENST00000283290 COL3A1P02461 1466 aaPredicted RBP23.5■■□□□ 1.35
ATG3-201ENST00000283290 PDE3BQ13370 1112 aa23.5■■□□□ 1.35
ATG3-201ENST00000283290 CDCA7Q9BWT1 371 aaPredicted RBP23.5■■□□□ 1.35
ATG3-201ENST00000283290 PRKRIP1Q9H875 184 aaPredicted RBP23.5■■□□□ 1.35
ATG3-201ENST00000283290 DDB1Q16531 1140 aa23.49■■□□□ 1.35
ATG3-201ENST00000283290 RGPD1P0DJD0 1748 aa23.48■■□□□ 1.35
ATG3-201ENST00000283290 IL2RBP14784 551 aa23.48■■□□□ 1.35
ATG3-201ENST00000283290 IL13P35225 146 aa23.48■■□□□ 1.35
ATG3-201ENST00000283290 MEGF6O75095 1541 aa23.47■■□□□ 1.35
ATG3-201ENST00000283290 RALBP1Q15311 655 aa23.47■■□□□ 1.35
ATG3-201ENST00000283290 AEBP1Q8IUX7 1158 aa23.47■■□□□ 1.35
ATG3-201ENST00000283290 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
ATG3-201ENST00000283290 DIAPH1O60610 1272 aaKnown RBP23.44■■□□□ 1.34
ATG3-201ENST00000283290 SHANK3Q9BYB0 1731 aa23.44■■□□□ 1.34
ATG3-201ENST00000283290 EXOC5O00471 708 aa23.44■■□□□ 1.34
ATG3-201ENST00000283290 MYBBP1AQ9BQG0 1328 aaKnown RBP23.43■■□□□ 1.34
ATG3-201ENST00000283290 SBF2Q86WG5 1849 aa23.43■■□□□ 1.34
ATG3-201ENST00000283290 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
ATG3-201ENST00000283290 HMOX1P09601 288 aa23.43■■□□□ 1.34
ATG3-201ENST00000283290 TNS1Q9HBL0 1735 aaKnown RBP23.43■■□□□ 1.34
ATG3-201ENST00000283290 IGSF1Q8N6C5 1336 aa23.42■■□□□ 1.34
ATG3-201ENST00000283290 MARCH10Q8NA82 808 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms