RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 CCDC158Q5M9N0 1113 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 DAAM2Q86T65 1068 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 GBP3Q9H0R5 595 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 TIGD1Q96MW7 591 aa15.52■□□□□ 0.08
SMARCA5-201ENST00000283131 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
SMARCA5-201ENST00000283131 RAB3IL1Q8TBN0 382 aa15.52■□□□□ 0.08
SMARCA5-201ENST00000283131 CDC45O75419 566 aa15.52■□□□□ 0.07
SMARCA5-201ENST00000283131 LARP1Q6PKG0 1096 aaKnown RBP15.52■□□□□ 0.07
SMARCA5-201ENST00000283131 ZSCAN29Q8IWY8 852 aaPredicted RBP15.52■□□□□ 0.07
SMARCA5-201ENST00000283131 TSNARE1Q96NA8 513 aa15.52■□□□□ 0.07
SMARCA5-201ENST00000283131 MPHOSPH9Q99550 1183 aa15.52■□□□□ 0.07
SMARCA5-201ENST00000283131 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 C6orf163Q5TEZ5 329 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 FIBPO43427 364 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 ATF3P18847 181 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 CTNNA2P26232 953 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 ANKRD1Q15327 319 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 V9GYY5 206 aaPredicted RBP15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 MRPS9P82933 396 aaKnown RBP15.51■□□□□ 0.07
SMARCA5-201ENST00000283131 VPS36Q86VN1 386 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 CARMIL2Q6F5E8 1435 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 MICALCLQ6ZW33 695 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 FERMT1Q9BQL6 677 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 ERICH4A6NGS2 130 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 MCM3P25205 808 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 ARHGAP29Q52LW3 1261 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 TAOK3Q9H2K8 898 aa15.5■□□□□ 0.07
SMARCA5-201ENST00000283131 KAT6BQ8WYB5 2073 aa15.49■□□□□ 0.07
SMARCA5-201ENST00000283131 SPA17Q15506 151 aa15.49■□□□□ 0.07
SMARCA5-201ENST00000283131 NUP133Q8WUM0 1156 aa15.49■□□□□ 0.07
SMARCA5-201ENST00000283131 CDKL5O76039 1030 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 LUZP1Q86V48 1076 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 SREK1Q8WXA9 508 aaKnown RBP15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 GNAI1P63096 354 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 PANK3Q9H999 370 aa15.48■□□□□ 0.07
SMARCA5-201ENST00000283131 MACROD2A1Z1Q3 448 aa15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 TRAK2O60296 914 aa15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 PRPF40AO75400 957 aaKnown RBP15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 SLU7O95391 586 aaKnown RBP15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 FSD2A1L4K1 749 aa15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 CCDC178Q5BJE1 867 aa15.47■□□□□ 0.07
SMARCA5-201ENST00000283131 SERPINA10Q9UK55 444 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 PKNOX2Q96KN3 472 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 FAM107BQ9H098 131 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 TMCO5BA8MYB1 307 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 NEK4P51957 841 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 SMTNL1A8MU46 457 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 CBX1P83916 185 aa15.46■□□□□ 0.07
SMARCA5-201ENST00000283131 VGFO15240 615 aaPredicted RBP15.46■□□□□ 0.06
SMARCA5-201ENST00000283131 SPECC1Q5M775 1068 aa15.46■□□□□ 0.06
SMARCA5-201ENST00000283131 UBXN4Q92575 508 aa15.46■□□□□ 0.06
SMARCA5-201ENST00000283131 RNF187Q5TA31 235 aaPredicted RBP15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 ZSCAN25Q6NSZ9 544 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 LRRC45Q96CN5 670 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 MYCNP04198 464 aaPredicted RBP15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 KRT85P78386 507 aa15.45■□□□□ 0.06
SMARCA5-201ENST00000283131 USP5P45974 858 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 PPP1R14CQ8TAE6 165 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 ARL1P40616 181 aaPredicted RBP15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 CACNA2D4Q7Z3S7 1137 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 TSG101Q99816 390 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 TMOD2Q9NZR1 351 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 SPECC1LQ69YQ0 1117 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 CEP131Q9UPN4 1083 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 CYP46A1Q9Y6A2 500 aa15.44■□□□□ 0.06
SMARCA5-201ENST00000283131 MINK1Q8N4C8 1332 aaPredicted RBP15.43■□□□□ 0.06
SMARCA5-201ENST00000283131 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
SMARCA5-201ENST00000283131 UBAC1Q9BSL1 405 aa15.43■□□□□ 0.06
SMARCA5-201ENST00000283131 GNAI3P08754 354 aa15.43■□□□□ 0.06
SMARCA5-201ENST00000283131 FKBP15Q5T1M5 1219 aa15.43■□□□□ 0.06
SMARCA5-201ENST00000283131 FGFR1OPO95684 399 aaKnown RBP15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 APAF1O14727 1248 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 STK3Q13188 491 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 NAP1L3Q99457 506 aaPredicted RBP15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 LMAN1P49257 510 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 IKBKGQ9Y6K9 419 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
SMARCA5-201ENST00000283131 AAMPQ13685 434 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 TNIKQ9UKE5 1360 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 WASF1Q92558 559 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 SEPT6Q14141 434 aa15.41■□□□□ 0.06
SMARCA5-201ENST00000283131 GTPBP4Q9BZE4 634 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms