RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 NLRP6P59044 892 aa17.46■□□□□ 0.39
SPC25-201ENST00000282074 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
SPC25-201ENST00000282074 PROM2Q8N271 834 aa17.46■□□□□ 0.39
SPC25-201ENST00000282074 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
SPC25-201ENST00000282074 PTGER2P43116 358 aa17.45■□□□□ 0.38
SPC25-201ENST00000282074 PDGFDQ9GZP0 370 aaPredicted RBP17.45■□□□□ 0.38
SPC25-201ENST00000282074 TOPAZ1Q8N9V7 1692 aa17.45■□□□□ 0.38
SPC25-201ENST00000282074 RAB3GAP2Q9H2M9 1393 aa17.45■□□□□ 0.38
SPC25-201ENST00000282074 PEAK1Q9H792 1746 aa17.44■□□□□ 0.38
SPC25-201ENST00000282074 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
SPC25-201ENST00000282074 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
SPC25-201ENST00000282074 SYT17Q9BSW7 474 aa17.43■□□□□ 0.38
SPC25-201ENST00000282074 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
SPC25-201ENST00000282074 PPIP5K1Q6PFW1 1433 aa17.43■□□□□ 0.38
SPC25-201ENST00000282074 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 TXNRD1Q16881 649 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 BCL9O00512 1426 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 SBF2Q86WG5 1849 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 WDR17Q8IZU2 1322 aa17.42■□□□□ 0.38
SPC25-201ENST00000282074 MTFR1LQ9H019 292 aa17.41■□□□□ 0.38
SPC25-201ENST00000282074 EXOC5O00471 708 aa17.4■□□□□ 0.38
SPC25-201ENST00000282074 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
SPC25-201ENST00000282074 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
SPC25-201ENST00000282074 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
SPC25-201ENST00000282074 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
SPC25-201ENST00000282074 CARD10Q9BWT7 1032 aa17.39■□□□□ 0.37
SPC25-201ENST00000282074 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
SPC25-201ENST00000282074 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
SPC25-201ENST00000282074 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
SPC25-201ENST00000282074 USP6P35125 1406 aa17.37■□□□□ 0.37
SPC25-201ENST00000282074 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
SPC25-201ENST00000282074 MYOM1P52179 1685 aa17.37■□□□□ 0.37
SPC25-201ENST00000282074 ARXQ96QS3 562 aa17.37■□□□□ 0.37
SPC25-201ENST00000282074 SGIP1Q9BQI5 828 aa17.36■□□□□ 0.37
SPC25-201ENST00000282074 SLIT3O75094 1523 aa17.36■□□□□ 0.37
SPC25-201ENST00000282074 UTRNP46939 3433 aa17.35■□□□□ 0.37
SPC25-201ENST00000282074 NBPF1Q3BBV0 1214 aa17.35■□□□□ 0.37
SPC25-201ENST00000282074 ARHGEF25Q86VW2 580 aa17.35■□□□□ 0.37
SPC25-201ENST00000282074 CHD4Q14839 1912 aa17.34■□□□□ 0.37
SPC25-201ENST00000282074 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.37
SPC25-201ENST00000282074 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
SPC25-201ENST00000282074 KIAA1210Q9ULL0 1709 aa17.33■□□□□ 0.36
SPC25-201ENST00000282074 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
SPC25-201ENST00000282074 GPR162Q16538 588 aa17.32■□□□□ 0.36
SPC25-201ENST00000282074 COL18A1P39060 1754 aa17.32■□□□□ 0.36
SPC25-201ENST00000282074 CCDC7Q96M83 1385 aa17.32■□□□□ 0.36
SPC25-201ENST00000282074 POTEHQ6S545 545 aa17.31■□□□□ 0.36
SPC25-201ENST00000282074 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
SPC25-201ENST00000282074 SOX12O15370 315 aa17.3■□□□□ 0.36
SPC25-201ENST00000282074 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
SPC25-201ENST00000282074 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
SPC25-201ENST00000282074 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
SPC25-201ENST00000282074 IFFO2Q5TF58 517 aa17.28■□□□□ 0.36
SPC25-201ENST00000282074 ACSBG1Q96GR2 724 aa17.28■□□□□ 0.36
SPC25-201ENST00000282074 TTC21BQ7Z4L5 1316 aa17.28■□□□□ 0.36
SPC25-201ENST00000282074 TTC21AQ8NDW8 1320 aa17.27■□□□□ 0.36
SPC25-201ENST00000282074 POLD1P28340 1107 aa17.27■□□□□ 0.35
SPC25-201ENST00000282074 SLC16A10Q8TF71 515 aa17.27■□□□□ 0.35
SPC25-201ENST00000282074 TNS2Q63HR2 1409 aa17.27■□□□□ 0.35
SPC25-201ENST00000282074 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
SPC25-201ENST00000282074 KLHL34Q8N239 644 aa17.25■□□□□ 0.35
SPC25-201ENST00000282074 NLRP2Q9NX02 1062 aa17.25■□□□□ 0.35
SPC25-201ENST00000282074 QRICH2Q9H0J4 1663 aa17.24■□□□□ 0.35
SPC25-201ENST00000282074 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
SPC25-201ENST00000282074 IL2RBP14784 551 aa17.23■□□□□ 0.35
SPC25-201ENST00000282074 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
SPC25-201ENST00000282074 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
SPC25-201ENST00000282074 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
SPC25-201ENST00000282074 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
SPC25-201ENST00000282074 NHSQ6T4R5 1651 aa17.22■□□□□ 0.35
SPC25-201ENST00000282074 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
SPC25-201ENST00000282074 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.35
SPC25-201ENST00000282074 ABCC6O95255 1503 aa17.2■□□□□ 0.34
SPC25-201ENST00000282074 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SPC25-201ENST00000282074 KTN1Q86UP2 1357 aaKnown RBP17.2■□□□□ 0.34
SPC25-201ENST00000282074 ERBB3P21860 1342 aa17.19■□□□□ 0.34
SPC25-201ENST00000282074 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
SPC25-201ENST00000282074 NFAT5O94916 1531 aa17.19■□□□□ 0.34
SPC25-201ENST00000282074 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
SPC25-201ENST00000282074 TFCP2L1Q9NZI6 479 aa17.18■□□□□ 0.34
SPC25-201ENST00000282074 BTAF1O14981 1849 aa17.16■□□□□ 0.34
SPC25-201ENST00000282074 PNPLA7Q6ZV29 1317 aa17.16■□□□□ 0.34
SPC25-201ENST00000282074 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPC25-201ENST00000282074 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
SPC25-201ENST00000282074 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
SPC25-201ENST00000282074 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
SPC25-201ENST00000282074 NLGN2Q8NFZ4 835 aa17.13■□□□□ 0.33
SPC25-201ENST00000282074 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
SPC25-201ENST00000282074 SYTL4Q96C24 671 aaPredicted RBP17.12■□□□□ 0.33
SPC25-201ENST00000282074 NME9Q86XW9 330 aa17.11■□□□□ 0.33
SPC25-201ENST00000282074 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
SPC25-201ENST00000282074 YBX3P16989 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPC25-201ENST00000282074 PRIM1P49642 420 aaKnown RBP17.1■□□□□ 0.33
SPC25-201ENST00000282074 ROCK2O75116 1388 aaKnown RBP17.09■□□□□ 0.33
SPC25-201ENST00000282074 KCNQ4P56696 695 aa17.09■□□□□ 0.33
SPC25-201ENST00000282074 HDGFL2Q7Z4V5 671 aaPredicted RBP17.09■□□□□ 0.33
SPC25-201ENST00000282074 HMGB2P26583 209 aaKnown RBP17.08■□□□□ 0.32
SPC25-201ENST00000282074 TMC1Q8TDI8 760 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms