RNA–Protein interactions for RNA: ENST00000279387.11

PPP4C-201, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-201ENST00000279387 AATKQ6ZMQ8 1374 aa33.61■■■□□ 2.97
PPP4C-201ENST00000279387 SEPT12Q8IYM1 358 aa33.61■■■□□ 2.97
PPP4C-201ENST00000279387 COL5A2P05997 1499 aaPredicted RBP33.6■■■□□ 2.97
PPP4C-201ENST00000279387 GGNBP2Q9H3C7 697 aa33.6■■■□□ 2.97
PPP4C-201ENST00000279387 KIF20BQ96Q89 1820 aa33.59■■■□□ 2.97
PPP4C-201ENST00000279387 NSD3Q9BZ95 1437 aa33.59■■■□□ 2.97
PPP4C-201ENST00000279387 FBLN1P23142 703 aa33.58■■■□□ 2.97
PPP4C-201ENST00000279387 COG3Q96JB2 828 aa33.58■■■□□ 2.97
PPP4C-201ENST00000279387 FYB1O15117 783 aa33.57■■■□□ 2.96
PPP4C-201ENST00000279387 SPATA31A1Q5TZJ5 1347 aa33.57■■■□□ 2.96
PPP4C-201ENST00000279387 UPF1Q92900 1129 aaKnown RBP eCLIP33.53■■■□□ 2.96
PPP4C-201ENST00000279387 ONECUT3O60422 494 aaPredicted RBP33.52■■■□□ 2.96
PPP4C-201ENST00000279387 KIF7Q2M1P5 1343 aa33.49■■■□□ 2.95
PPP4C-201ENST00000279387 PANK3Q9H999 370 aa33.49■■■□□ 2.95
PPP4C-201ENST00000279387 EP400Q96L91 3159 aa33.49■■■□□ 2.95
PPP4C-201ENST00000279387 TOM1L2Q6ZVM7 507 aa33.48■■■□□ 2.95
PPP4C-201ENST00000279387 THSD7AQ9UPZ6 1657 aa33.47■■■□□ 2.95
PPP4C-201ENST00000279387 CSB-PGBD3P0DP91 1061 aa33.47■■■□□ 2.95
PPP4C-201ENST00000279387 CRB1P82279 1406 aa33.46■■■□□ 2.95
PPP4C-201ENST00000279387 FAM182BQ5T319 152 aa33.45■■■□□ 2.94
PPP4C-201ENST00000279387 KRT27Q7Z3Y8 459 aa33.45■■■□□ 2.94
PPP4C-201ENST00000279387 TCP11L2Q8N4U5 519 aa33.45■■■□□ 2.94
PPP4C-201ENST00000279387 WDR17Q8IZU2 1322 aa33.44■■■□□ 2.94
PPP4C-201ENST00000279387 RRS1Q15050 365 aaKnown RBP33.44■■■□□ 2.94
PPP4C-201ENST00000279387 MAP3K19Q56UN5 1328 aa33.43■■■□□ 2.94
PPP4C-201ENST00000279387 ABCC6O95255 1503 aa33.41■■■□□ 2.94
PPP4C-201ENST00000279387 CGNL1Q0VF96 1302 aa33.41■■■□□ 2.94
PPP4C-201ENST00000279387 BARGINQ6ZT62 677 aa33.39■■■□□ 2.94
PPP4C-201ENST00000279387 LTV1Q96GA3 475 aaPredicted RBP33.39■■■□□ 2.94
PPP4C-201ENST00000279387 AMPHP49418 695 aa33.37■■■□□ 2.93
PPP4C-201ENST00000279387 ANKRD24Q8TF21 1146 aa33.37■■■□□ 2.93
PPP4C-201ENST00000279387 IP6K1Q92551 441 aa33.36■■■□□ 2.93
PPP4C-201ENST00000279387 WNK3Q9BYP7 1800 aa33.35■■■□□ 2.93
PPP4C-201ENST00000279387 ERBB3P21860 1342 aa33.35■■■□□ 2.93
PPP4C-201ENST00000279387 NLRP2Q9NX02 1062 aa33.35■■■□□ 2.93
PPP4C-201ENST00000279387 THRAP3Q9Y2W1 955 aaKnown RBP33.35■■■□□ 2.93
PPP4C-201ENST00000279387 HOXC9P31274 260 aa33.34■■■□□ 2.93
PPP4C-201ENST00000279387 WASHC2AQ641Q2 1341 aa33.34■■■□□ 2.93
PPP4C-201ENST00000279387 CCDC7Q96M83 1385 aa33.34■■■□□ 2.93
PPP4C-201ENST00000279387 TNNT2P45379 298 aaPredicted RBP33.33■■■□□ 2.93
PPP4C-201ENST00000279387 PEAK1Q9H792 1746 aa33.32■■■□□ 2.93
PPP4C-201ENST00000279387 ANKRD26Q9UPS8 1709 aa33.32■■■□□ 2.93
PPP4C-201ENST00000279387 CARD10Q9BWT7 1032 aa33.32■■■□□ 2.92
PPP4C-201ENST00000279387 BLMP54132 1417 aaPredicted RBP33.31■■■□□ 2.92
PPP4C-201ENST00000279387 RGPD2P0DJD1 1756 aa33.3■■■□□ 2.92
PPP4C-201ENST00000279387 PARP4Q9UKK3 1724 aaKnown RBP33.3■■■□□ 2.92
PPP4C-201ENST00000279387 EMILIN1Q9Y6C2 1016 aa33.29■■■□□ 2.92
PPP4C-201ENST00000279387 MAP2P11137 1827 aaKnown RBP33.29■■■□□ 2.92
PPP4C-201ENST00000279387 LRRC37A3O60309 1634 aa33.28■■■□□ 2.92
PPP4C-201ENST00000279387 PDE3BQ13370 1112 aa33.28■■■□□ 2.92
PPP4C-201ENST00000279387 PPM1GO15355 546 aaPredicted RBP33.27■■■□□ 2.92
PPP4C-201ENST00000279387 KNSTRNQ9Y448 316 aa33.26■■■□□ 2.91
PPP4C-201ENST00000279387 HSP90AB2PQ58FF8 381 aa33.24■■■□□ 2.91
PPP4C-201ENST00000279387 RTL1A6NKG5 1358 aa33.24■■■□□ 2.91
PPP4C-201ENST00000279387 FAM208AQ9UK61 1670 aaKnown RBP33.22■■■□□ 2.91
PPP4C-201ENST00000279387 CNGB1Q14028 1251 aaPredicted RBP33.21■■■□□ 2.91
PPP4C-201ENST00000279387 DDB1Q16531 1140 aa33.21■■■□□ 2.91
PPP4C-201ENST00000279387 DISP2A7MBM2 1401 aa33.21■■■□□ 2.91
PPP4C-201ENST00000279387 FLT4P35916 1363 aa33.19■■■□□ 2.9
PPP4C-201ENST00000279387 USHBP1Q8N6Y0 703 aa33.18■■■□□ 2.9
PPP4C-201ENST00000279387 MORC1Q86VD1 984 aa33.17■■■□□ 2.9
PPP4C-201ENST00000279387 POLKQ9UBT6 870 aa33.17■■■□□ 2.9
PPP4C-201ENST00000279387 NSD2O96028 1365 aa33.16■■■□□ 2.9
PPP4C-201ENST00000279387 AMER1Q5JTC6 1135 aaPredicted RBP33.16■■■□□ 2.9
PPP4C-201ENST00000279387 DEFB132Q7Z7B7 95 aa33.16■■■□□ 2.9
PPP4C-201ENST00000279387 INSRP06213 1382 aa33.15■■■□□ 2.9
PPP4C-201ENST00000279387 CCDC125Q86Z20 511 aa33.15■■■□□ 2.9
PPP4C-201ENST00000279387 CDCA7Q9BWT1 371 aaPredicted RBP33.15■■■□□ 2.9
PPP4C-201ENST00000279387 PER1O15534 1290 aaPredicted RBP33.14■■■□□ 2.9
PPP4C-201ENST00000279387 SF3B2Q13435 895 aaKnown RBP33.14■■■□□ 2.9
PPP4C-201ENST00000279387 FAM196AQ6ZSG2 479 aa33.14■■■□□ 2.9
PPP4C-201ENST00000279387 TRIM37O94972 964 aa33.13■■■□□ 2.89
PPP4C-201ENST00000279387 IL2RBP14784 551 aa33.13■■■□□ 2.89
PPP4C-201ENST00000279387 CC2D1BQ5T0F9 858 aaKnown RBP33.13■■■□□ 2.89
PPP4C-201ENST00000279387 NBPF6Q5VWK0 638 aa33.13■■■□□ 2.89
PPP4C-201ENST00000279387 NBPF4Q96M43 638 aa33.13■■■□□ 2.89
PPP4C-201ENST00000279387 SMG6Q86US8 1419 aaKnown RBP33.13■■■□□ 2.89
PPP4C-201ENST00000279387 RGPD1P0DJD0 1748 aa33.13■■■□□ 2.89
PPP4C-201ENST00000279387 MARCH10Q8NA82 808 aaPredicted RBP33.12■■■□□ 2.89
PPP4C-201ENST00000279387 EXOC5O00471 708 aa33.11■■■□□ 2.89
PPP4C-201ENST00000279387 KIF24Q5T7B8 1368 aa33.1■■■□□ 2.89
PPP4C-201ENST00000279387 TNS1Q9HBL0 1735 aaKnown RBP33.1■■■□□ 2.89
PPP4C-201ENST00000279387 TNS2Q63HR2 1409 aa33.09■■■□□ 2.89
PPP4C-201ENST00000279387 OVOS2A0A0G2JMS6 1433 aa33.07■■■□□ 2.88
PPP4C-201ENST00000279387 SBF2Q86WG5 1849 aa33.05■■■□□ 2.88
PPP4C-201ENST00000279387 MEGF6O75095 1541 aa33.05■■■□□ 2.88
PPP4C-201ENST00000279387 EN1Q05925 392 aaPredicted RBP33.02■■■□□ 2.88
PPP4C-201ENST00000279387 BAG6P46379 1132 aa33.01■■■□□ 2.87
PPP4C-201ENST00000279387 PTF1AQ7RTS3 328 aa33.01■■■□□ 2.87
PPP4C-201ENST00000279387 EIF4A2Q14240 407 aaKnown RBP33■■■□□ 2.87
PPP4C-201ENST00000279387 DDX54Q8TDD1 881 aaKnown RBP33■■■□□ 2.87
PPP4C-201ENST00000279387 KAT6BQ8WYB5 2073 aa33■■■□□ 2.87
PPP4C-201ENST00000279387 APBA3O96018 575 aa32.98■■■□□ 2.87
PPP4C-201ENST00000279387 EYA1Q99502 592 aa32.98■■■□□ 2.87
PPP4C-201ENST00000279387 SHANK3Q9BYB0 1731 aa32.97■■■□□ 2.87
PPP4C-201ENST00000279387 RAPGEF4Q8WZA2 1011 aa32.96■■■□□ 2.87
PPP4C-201ENST00000279387 ACSBG1Q96GR2 724 aa32.94■■■□□ 2.86
PPP4C-201ENST00000279387 EZH2Q15910 746 aaKnown RBP32.93■■■□□ 2.86
PPP4C-201ENST00000279387 ZCRB1Q8TBF4 217 aaKnown RBP32.93■■■□□ 2.86
PPP4C-201ENST00000279387 TATP17735 454 aaPredicted RBP32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms