RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 GPBP1L1Q9HC44 474 aaPredicted RBP17.94■□□□□ 0.46
MRPS28-201ENST00000276585 ATP10DQ9P241 1426 aa17.94■□□□□ 0.46
MRPS28-201ENST00000276585 CRB1P82279 1406 aa17.92■□□□□ 0.46
MRPS28-201ENST00000276585 LRRC37A3O60309 1634 aa17.92■□□□□ 0.46
MRPS28-201ENST00000276585 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
MRPS28-201ENST00000276585 WASLO00401 505 aaPredicted RBP17.91■□□□□ 0.46
MRPS28-201ENST00000276585 DCAF11Q8TEB1 546 aa17.91■□□□□ 0.46
MRPS28-201ENST00000276585 CPDO75976 1380 aa17.91■□□□□ 0.46
MRPS28-201ENST00000276585 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
MRPS28-201ENST00000276585 COL5A2P05997 1499 aaPredicted RBP17.9■□□□□ 0.46
MRPS28-201ENST00000276585 GRIN3BO60391 1043 aa17.9■□□□□ 0.46
MRPS28-201ENST00000276585 POLD1P28340 1107 aa17.9■□□□□ 0.46
MRPS28-201ENST00000276585 MARCH10Q8NA82 808 aaPredicted RBP17.9■□□□□ 0.46
MRPS28-201ENST00000276585 ZNF526Q8TF50 670 aaPredicted RBP17.89■□□□□ 0.45
MRPS28-201ENST00000276585 KDM2AQ9Y2K7 1162 aa17.89■□□□□ 0.45
MRPS28-201ENST00000276585 NLGN2Q8NFZ4 835 aa17.88■□□□□ 0.45
MRPS28-201ENST00000276585 TRAK1Q9UPV9 953 aa17.88■□□□□ 0.45
MRPS28-201ENST00000276585 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
MRPS28-201ENST00000276585 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
MRPS28-201ENST00000276585 STAC3Q96MF2 364 aa17.86■□□□□ 0.45
MRPS28-201ENST00000276585 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
MRPS28-201ENST00000276585 BCL9O00512 1426 aa17.85■□□□□ 0.45
MRPS28-201ENST00000276585 YBX3P16989 372 aaKnown RBP eCLIP17.85■□□□□ 0.45
MRPS28-201ENST00000276585 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
MRPS28-201ENST00000276585 USP19O94966 1318 aa17.83■□□□□ 0.44
MRPS28-201ENST00000276585 GCP02774 474 aa17.83■□□□□ 0.44
MRPS28-201ENST00000276585 ZNF827Q17R98 1081 aa17.83■□□□□ 0.44
MRPS28-201ENST00000276585 AKAP12Q02952 1782 aa17.83■□□□□ 0.44
MRPS28-201ENST00000276585 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.44
MRPS28-201ENST00000276585 ITSN1Q15811 1721 aa17.82■□□□□ 0.44
MRPS28-201ENST00000276585 TRPM1Q7Z4N2 1603 aa17.82■□□□□ 0.44
MRPS28-201ENST00000276585 APLP1P51693 650 aa17.81■□□□□ 0.44
MRPS28-201ENST00000276585 SLC16A10Q8TF71 515 aa17.81■□□□□ 0.44
MRPS28-201ENST00000276585 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
MRPS28-201ENST00000276585 ACEP12821 1306 aa17.8■□□□□ 0.44
MRPS28-201ENST00000276585 COL13A1Q5TAT6 717 aaPredicted RBP17.8■□□□□ 0.44
MRPS28-201ENST00000276585 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
MRPS28-201ENST00000276585 SIN3AQ96ST3 1273 aa17.79■□□□□ 0.44
MRPS28-201ENST00000276585 PAPPAQ13219 1627 aa17.79■□□□□ 0.44
MRPS28-201ENST00000276585 ACSBG1Q96GR2 724 aa17.78■□□□□ 0.44
MRPS28-201ENST00000276585 EXOC5O00471 708 aa17.77■□□□□ 0.44
MRPS28-201ENST00000276585 PRELPP51888 382 aa17.77■□□□□ 0.44
MRPS28-201ENST00000276585 TNS4Q8IZW8 715 aa17.77■□□□□ 0.44
MRPS28-201ENST00000276585 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
MRPS28-201ENST00000276585 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
MRPS28-201ENST00000276585 QRICH2Q9H0J4 1663 aa17.76■□□□□ 0.43
MRPS28-201ENST00000276585 ADCY9O60503 1353 aa17.76■□□□□ 0.43
MRPS28-201ENST00000276585 WNK3Q9BYP7 1800 aa17.75■□□□□ 0.43
MRPS28-201ENST00000276585 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
MRPS28-201ENST00000276585 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
MRPS28-201ENST00000276585 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
MRPS28-201ENST00000276585 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
MRPS28-201ENST00000276585 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
MRPS28-201ENST00000276585 LRRC4BQ9NT99 713 aa17.73■□□□□ 0.43
MRPS28-201ENST00000276585 NHSQ6T4R5 1651 aa17.73■□□□□ 0.43
MRPS28-201ENST00000276585 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
MRPS28-201ENST00000276585 KIF3CO14782 793 aa17.72■□□□□ 0.43
MRPS28-201ENST00000276585 TRIM26Q12899 539 aaPredicted RBP17.72■□□□□ 0.43
MRPS28-201ENST00000276585 AKT1S1Q96B36 256 aa17.72■□□□□ 0.43
MRPS28-201ENST00000276585 CDK19Q9BWU1 502 aa17.72■□□□□ 0.43
MRPS28-201ENST00000276585 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
MRPS28-201ENST00000276585 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
MRPS28-201ENST00000276585 USP6P35125 1406 aa17.7■□□□□ 0.42
MRPS28-201ENST00000276585 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
MRPS28-201ENST00000276585 CARD10Q9BWT7 1032 aa17.69■□□□□ 0.42
MRPS28-201ENST00000276585 AXIN2Q9Y2T1 843 aa17.69■□□□□ 0.42
MRPS28-201ENST00000276585 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
MRPS28-201ENST00000276585 NLRP6P59044 892 aa17.68■□□□□ 0.42
MRPS28-201ENST00000276585 COL24A1Q17RW2 1714 aa17.68■□□□□ 0.42
MRPS28-201ENST00000276585 NEUROD1Q13562 356 aa17.67■□□□□ 0.42
MRPS28-201ENST00000276585 SLC34A2O95436 690 aa17.66■□□□□ 0.42
MRPS28-201ENST00000276585 QSER1Q2KHR3 1735 aa17.66■□□□□ 0.42
MRPS28-201ENST00000276585 BTAF1O14981 1849 aa17.65■□□□□ 0.42
MRPS28-201ENST00000276585 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
MRPS28-201ENST00000276585 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
MRPS28-201ENST00000276585 SLIT3O75094 1523 aa17.63■□□□□ 0.41
MRPS28-201ENST00000276585 TOMM70O94826 608 aa17.63■□□□□ 0.41
MRPS28-201ENST00000276585 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
MRPS28-201ENST00000276585 KLRG1Q96E93 195 aa17.63■□□□□ 0.41
MRPS28-201ENST00000276585 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
MRPS28-201ENST00000276585 COL18A1P39060 1754 aa17.63■□□□□ 0.41
MRPS28-201ENST00000276585 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
MRPS28-201ENST00000276585 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
MRPS28-201ENST00000276585 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
MRPS28-201ENST00000276585 PPIP5K1Q6PFW1 1433 aa17.62■□□□□ 0.41
MRPS28-201ENST00000276585 SOX12O15370 315 aa17.61■□□□□ 0.41
MRPS28-201ENST00000276585 KCNQ4P56696 695 aa17.61■□□□□ 0.41
MRPS28-201ENST00000276585 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
MRPS28-201ENST00000276585 HTRA3P83110 453 aa17.6■□□□□ 0.41
MRPS28-201ENST00000276585 JMYQ8N9B5 988 aa17.6■□□□□ 0.41
MRPS28-201ENST00000276585 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
MRPS28-201ENST00000276585 ABCC6O95255 1503 aa17.6■□□□□ 0.41
MRPS28-201ENST00000276585 TUBGCP6Q96RT7 1819 aa17.6■□□□□ 0.41
MRPS28-201ENST00000276585 WDR90Q96KV7 1748 aa17.58■□□□□ 0.41
MRPS28-201ENST00000276585 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
MRPS28-201ENST00000276585 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
MRPS28-201ENST00000276585 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
MRPS28-201ENST00000276585 COL23A1Q86Y22 540 aaPredicted RBP17.56■□□□□ 0.4
MRPS28-201ENST00000276585 TONSLQ96HA7 1378 aa17.55■□□□□ 0.4
MRPS28-201ENST00000276585 IL2RBP14784 551 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms