RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 SPATA31A7Q8IWB4 1347 aa26.37■■□□□ 1.81
SAMD1-201ENST00000269724 CCDC9Q9Y3X0 531 aaKnown RBP26.36■■□□□ 1.81
SAMD1-201ENST00000269724 RGS12O14924 1447 aa26.36■■□□□ 1.81
SAMD1-201ENST00000269724 ZBTB7CA1YPR0 619 aa26.35■■□□□ 1.81
SAMD1-201ENST00000269724 NSD2O96028 1365 aa26.34■■□□□ 1.81
SAMD1-201ENST00000269724 ANKRD26Q9UPS8 1709 aa26.34■■□□□ 1.81
SAMD1-201ENST00000269724 ONECUT3O60422 494 aaPredicted RBP26.34■■□□□ 1.81
SAMD1-201ENST00000269724 STRN4Q9NRL3 753 aa26.34■■□□□ 1.81
SAMD1-201ENST00000269724 AXIN2Q9Y2T1 843 aa26.33■■□□□ 1.81
SAMD1-201ENST00000269724 RGPD5Q99666 1765 aa26.33■■□□□ 1.8
SAMD1-201ENST00000269724 SOCS7O14512 581 aa26.32■■□□□ 1.8
SAMD1-201ENST00000269724 SPATA31A1Q5TZJ5 1347 aa26.32■■□□□ 1.8
SAMD1-201ENST00000269724 KNSTRNQ9Y448 316 aa26.31■■□□□ 1.8
SAMD1-201ENST00000269724 BLMP54132 1417 aaPredicted RBP26.31■■□□□ 1.8
SAMD1-201ENST00000269724 CRB1P82279 1406 aa26.3■■□□□ 1.8
SAMD1-201ENST00000269724 LARP1Q6PKG0 1096 aaKnown RBP26.29■■□□□ 1.8
SAMD1-201ENST00000269724 WDR17Q8IZU2 1322 aa26.29■■□□□ 1.8
SAMD1-201ENST00000269724 KIF24Q5T7B8 1368 aa26.29■■□□□ 1.8
SAMD1-201ENST00000269724 IP6K1Q92551 441 aa26.28■■□□□ 1.8
SAMD1-201ENST00000269724 THRAP3Q9Y2W1 955 aaKnown RBP26.28■■□□□ 1.8
SAMD1-201ENST00000269724 MAP3K19Q56UN5 1328 aa26.28■■□□□ 1.8
SAMD1-201ENST00000269724 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
SAMD1-201ENST00000269724 PER1O15534 1290 aaPredicted RBP26.26■■□□□ 1.79
SAMD1-201ENST00000269724 BARGINQ6ZT62 677 aa26.26■■□□□ 1.79
SAMD1-201ENST00000269724 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
SAMD1-201ENST00000269724 ERBB3P21860 1342 aa26.24■■□□□ 1.79
SAMD1-201ENST00000269724 AMPHP49418 695 aa26.24■■□□□ 1.79
SAMD1-201ENST00000269724 FAM98CQ17RN3 349 aaKnown RBP26.24■■□□□ 1.79
SAMD1-201ENST00000269724 SEPT12Q8IYM1 358 aa26.24■■□□□ 1.79
SAMD1-201ENST00000269724 THSD7AQ9UPZ6 1657 aa26.24■■□□□ 1.79
SAMD1-201ENST00000269724 AMER1Q5JTC6 1135 aaPredicted RBP26.23■■□□□ 1.79
SAMD1-201ENST00000269724 TOM1L2Q6ZVM7 507 aa26.23■■□□□ 1.79
SAMD1-201ENST00000269724 FBLN1P23142 703 aa26.22■■□□□ 1.79
SAMD1-201ENST00000269724 HOXC9P31274 260 aa26.22■■□□□ 1.79
SAMD1-201ENST00000269724 CARD10Q9BWT7 1032 aa26.22■■□□□ 1.79
SAMD1-201ENST00000269724 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
SAMD1-201ENST00000269724 NPC1L1Q9UHC9 1359 aa26.21■■□□□ 1.79
SAMD1-201ENST00000269724 MAP2P11137 1827 aaKnown RBP26.21■■□□□ 1.79
SAMD1-201ENST00000269724 CSB-PGBD3P0DP91 1061 aa26.21■■□□□ 1.79
SAMD1-201ENST00000269724 RRS1Q15050 365 aaKnown RBP26.21■■□□□ 1.79
SAMD1-201ENST00000269724 BRWD3Q6RI45 1802 aa26.21■■□□□ 1.79
SAMD1-201ENST00000269724 FLT4P35916 1363 aa26.2■■□□□ 1.78
SAMD1-201ENST00000269724 ANKRD24Q8TF21 1146 aa26.19■■□□□ 1.78
SAMD1-201ENST00000269724 USP35Q9P2H5 1018 aa26.19■■□□□ 1.78
SAMD1-201ENST00000269724 MORC1Q86VD1 984 aa26.17■■□□□ 1.78
SAMD1-201ENST00000269724 INSRP06213 1382 aa26.17■■□□□ 1.78
SAMD1-201ENST00000269724 PEAK1Q9H792 1746 aa26.17■■□□□ 1.78
SAMD1-201ENST00000269724 CDCA7Q9BWT1 371 aaPredicted RBP26.16■■□□□ 1.78
SAMD1-201ENST00000269724 WNK3Q9BYP7 1800 aa26.16■■□□□ 1.78
SAMD1-201ENST00000269724 PARP4Q9UKK3 1724 aaKnown RBP26.15■■□□□ 1.78
SAMD1-201ENST00000269724 A0A0G2JS52 829 aa26.15■■□□□ 1.78
SAMD1-201ENST00000269724 MYT1Q01538 1121 aa26.15■■□□□ 1.78
SAMD1-201ENST00000269724 KRT27Q7Z3Y8 459 aa26.14■■□□□ 1.78
SAMD1-201ENST00000269724 POLKQ9UBT6 870 aa26.14■■□□□ 1.78
SAMD1-201ENST00000269724 SMG6Q86US8 1419 aaKnown RBP26.14■■□□□ 1.77
SAMD1-201ENST00000269724 EMILIN1Q9Y6C2 1016 aa26.13■■□□□ 1.77
SAMD1-201ENST00000269724 NLRP2Q9NX02 1062 aa26.12■■□□□ 1.77
SAMD1-201ENST00000269724 TNNT2P45379 298 aaPredicted RBP26.1■■□□□ 1.77
SAMD1-201ENST00000269724 HSP90AB2PQ58FF8 381 aa26.1■■□□□ 1.77
SAMD1-201ENST00000269724 DISP2A7MBM2 1401 aa26.1■■□□□ 1.77
SAMD1-201ENST00000269724 LTV1Q96GA3 475 aaPredicted RBP26.09■■□□□ 1.77
SAMD1-201ENST00000269724 EP400Q96L91 3159 aa26.08■■□□□ 1.77
SAMD1-201ENST00000269724 PPM1GO15355 546 aaPredicted RBP26.07■■□□□ 1.76
SAMD1-201ENST00000269724 PDE3BQ13370 1112 aa26.06■■□□□ 1.76
SAMD1-201ENST00000269724 CC2D1BQ5T0F9 858 aaKnown RBP26.06■■□□□ 1.76
SAMD1-201ENST00000269724 UPF1Q92900 1129 aaKnown RBP eCLIP26.06■■□□□ 1.76
SAMD1-201ENST00000269724 LRRC37A3O60309 1634 aa26.06■■□□□ 1.76
SAMD1-201ENST00000269724 RGPD2P0DJD1 1756 aa26.05■■□□□ 1.76
SAMD1-201ENST00000269724 DDB1Q16531 1140 aa26.04■■□□□ 1.76
SAMD1-201ENST00000269724 IL2RBP14784 551 aa26.03■■□□□ 1.76
SAMD1-201ENST00000269724 CCDC125Q86Z20 511 aa26.03■■□□□ 1.76
SAMD1-201ENST00000269724 NBPF6Q5VWK0 638 aa26.01■■□□□ 1.75
SAMD1-201ENST00000269724 NBPF4Q96M43 638 aa26.01■■□□□ 1.75
SAMD1-201ENST00000269724 NCAPD2Q15021 1401 aa26■■□□□ 1.75
SAMD1-201ENST00000269724 EXOC5O00471 708 aa26■■□□□ 1.75
SAMD1-201ENST00000269724 TNS2Q63HR2 1409 aa25.99■■□□□ 1.75
SAMD1-201ENST00000269724 FAM196AQ6ZSG2 479 aa25.99■■□□□ 1.75
SAMD1-201ENST00000269724 MTHFSP49914 203 aa25.96■■□□□ 1.75
SAMD1-201ENST00000269724 EIF4A2Q14240 407 aaKnown RBP25.96■■□□□ 1.75
SAMD1-201ENST00000269724 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
SAMD1-201ENST00000269724 BCL9O00512 1426 aa25.96■■□□□ 1.75
SAMD1-201ENST00000269724 DDX10Q13206 875 aaKnown RBP25.94■■□□□ 1.74
SAMD1-201ENST00000269724 EYA1Q99502 592 aa25.94■■□□□ 1.74
SAMD1-201ENST00000269724 RAPGEF4Q8WZA2 1011 aa25.93■■□□□ 1.74
SAMD1-201ENST00000269724 RGPD1P0DJD0 1748 aa25.92■■□□□ 1.74
SAMD1-201ENST00000269724 FAM182BQ5T319 152 aa25.92■■□□□ 1.74
SAMD1-201ENST00000269724 MEGF6O75095 1541 aa25.92■■□□□ 1.74
SAMD1-201ENST00000269724 PLEKHG2Q9H7P9 1386 aa25.92■■□□□ 1.74
SAMD1-201ENST00000269724 USHBP1Q8N6Y0 703 aa25.91■■□□□ 1.74
SAMD1-201ENST00000269724 MARCH10Q8NA82 808 aaPredicted RBP25.91■■□□□ 1.74
SAMD1-201ENST00000269724 IGSF1Q8N6C5 1336 aa25.9■■□□□ 1.74
SAMD1-201ENST00000269724 ZNF316A6NFI3 1004 aaPredicted RBP25.9■■□□□ 1.74
SAMD1-201ENST00000269724 TATP17735 454 aaPredicted RBP25.9■■□□□ 1.74
SAMD1-201ENST00000269724 SF3B2Q13435 895 aaKnown RBP25.89■■□□□ 1.74
SAMD1-201ENST00000269724 CNGB1Q14028 1251 aaPredicted RBP25.89■■□□□ 1.74
SAMD1-201ENST00000269724 PARD3Q8TEW0 1356 aa25.88■■□□□ 1.73
SAMD1-201ENST00000269724 IL13P35225 146 aa25.88■■□□□ 1.73
SAMD1-201ENST00000269724 ZCRB1Q8TBF4 217 aaKnown RBP25.88■■□□□ 1.73
SAMD1-201ENST00000269724 SBF2Q86WG5 1849 aa25.87■■□□□ 1.73
SAMD1-201ENST00000269724 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms