RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 BMP2KQ9NSY1 1161 aaPredicted RBP14.21□□□□□ -0.13
SRRM4-201ENST00000267260 GNAI3P08754 354 aa14.21□□□□□ -0.13
SRRM4-201ENST00000267260 PSME1Q06323 249 aa14.21□□□□□ -0.13
SRRM4-201ENST00000267260 NOL7Q9UMY1 257 aaKnown RBP14.21□□□□□ -0.13
SRRM4-201ENST00000267260 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
SRRM4-201ENST00000267260 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.14
SRRM4-201ENST00000267260 TANGO6Q9C0B7 1094 aa14.21□□□□□ -0.14
SRRM4-201ENST00000267260 GIGYF2Q6Y7W6 1299 aaKnown RBP14.21□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.14
SRRM4-201ENST00000267260 NEBLO76041 1014 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 TAF4BQ92750 862 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 PPP1R12BO60237 982 aaPredicted RBP14.2□□□□□ -0.14
SRRM4-201ENST00000267260 ME1P48163 572 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 DAAM2Q86T65 1068 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
SRRM4-201ENST00000267260 SOGA1O94964 1423 aa14.2□□□□□ -0.14
SRRM4-201ENST00000267260 SYTL4Q96C24 671 aaPredicted RBP14.2□□□□□ -0.14
SRRM4-201ENST00000267260 APAF1O14727 1248 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 ANAPC15P60006 121 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 ESPNB1AK53 854 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 GCC1Q96CN9 775 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 CEP131Q9UPN4 1083 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 NEK4P51957 841 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 SEPT6Q14141 434 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC57Q2TAC2 916 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 IL27Q8NEV9 243 aa14.19□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC175P0C221 793 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 SRCIN1Q9C0H9 1055 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 NACAP1Q9BZK3 213 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 FIBPO43427 364 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 C6orf163Q5TEZ5 329 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 ZSCAN25Q6NSZ9 544 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 CEP57L1Q8IYX8 460 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 RAPGEF2Q9Y4G8 1499 aa14.18□□□□□ -0.14
SRRM4-201ENST00000267260 RNF187Q5TA31 235 aaPredicted RBP14.17□□□□□ -0.14
SRRM4-201ENST00000267260 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
SRRM4-201ENST00000267260 GTF2A1P52655 376 aaPredicted RBP14.17□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
SRRM4-201ENST00000267260 SPECC1LQ69YQ0 1117 aa14.17□□□□□ -0.14
SRRM4-201ENST00000267260 AEBP2Q6ZN18 517 aaPredicted RBP14.17□□□□□ -0.14
SRRM4-201ENST00000267260 CASQ1P31415 396 aa14.17□□□□□ -0.14
SRRM4-201ENST00000267260 RBM25P49756 843 aaKnown RBP14.17□□□□□ -0.14
SRRM4-201ENST00000267260 ZSCAN12O43309 604 aa14.17□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC158Q5M9N0 1113 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 DNAJC2Q99543 621 aaKnown RBP14.16□□□□□ -0.14
SRRM4-201ENST00000267260 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 BRD4O60885 1362 aaPredicted RBP14.16□□□□□ -0.14
SRRM4-201ENST00000267260 WASF1Q92558 559 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 CNTLNQ9NXG0 1405 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 HNRNPMP52272 730 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRRM4-201ENST00000267260 IFFO1Q0D2I5 559 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 FILIP1Q7Z7B0 1213 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 KIF18AQ8NI77 898 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 VPS36Q86VN1 386 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 FGFR1OPO95684 399 aaKnown RBP14.16□□□□□ -0.14
SRRM4-201ENST00000267260 GRIPAP1Q4V328 841 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 RAPGEF4Q8WZA2 1011 aa14.16□□□□□ -0.14
SRRM4-201ENST00000267260 SUPT6HQ7KZ85 1726 aaKnown RBP14.15□□□□□ -0.14
SRRM4-201ENST00000267260 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 GNAI2P04899 355 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 CBX1P83916 185 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.15□□□□□ -0.14
SRRM4-201ENST00000267260 V9GYY5 206 aaPredicted RBP14.15□□□□□ -0.14
SRRM4-201ENST00000267260 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 TIGD1Q96MW7 591 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 MNAT1P51948 309 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 ZSCAN30Q86W11 494 aa14.15□□□□□ -0.14
SRRM4-201ENST00000267260 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.15
SRRM4-201ENST00000267260 KIF5CO60282 957 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 BMS1Q14692 1282 aaKnown RBP14.14□□□□□ -0.15
SRRM4-201ENST00000267260 PTPN14Q15678 1187 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 CCDC83Q8IWF9 413 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 SOGA3Q5TF21 947 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 K7ELQ4 463 aaPredicted RBP14.14□□□□□ -0.15
SRRM4-201ENST00000267260 CLGNO14967 610 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 SPA17Q15506 151 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 WDR66Q8TBY9 1149 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 DNAAF4Q8WXU2 420 aa14.14□□□□□ -0.15
SRRM4-201ENST00000267260 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
SRRM4-201ENST00000267260 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 MATR3P43243 847 aaKnown RBP eCLIP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 PRDM10Q9NQV6 1147 aa14.13□□□□□ -0.15
SRRM4-201ENST00000267260 CEBPZQ03701 1054 aaKnown RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 ZHX3Q9H4I2 956 aa14.13□□□□□ -0.15
SRRM4-201ENST00000267260 IBSPP21815 317 aaPredicted RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 IRX3P78415 501 aaPredicted RBP14.13□□□□□ -0.15
SRRM4-201ENST00000267260 KRT32Q14532 448 aa14.13□□□□□ -0.15
SRRM4-201ENST00000267260 NUP62CLQ9H1M0 184 aa14.12□□□□□ -0.15
SRRM4-201ENST00000267260 KANK4Q5T7N3 995 aaPredicted RBP14.12□□□□□ -0.15
SRRM4-201ENST00000267260 FAM114A1Q8IWE2 563 aa14.12□□□□□ -0.15
SRRM4-201ENST00000267260 SPATA32Q96LK8 384 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms