RNA–Protein interactions for RNA: ENST00000262829.11

RBFOX2-201, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-201ENST00000262829 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
RBFOX2-201ENST00000262829 CCDC125Q86Z20 511 aa20.47■□□□□ 0.87
RBFOX2-201ENST00000262829 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
RBFOX2-201ENST00000262829 ARHGEF25Q86VW2 580 aa20.45■□□□□ 0.86
RBFOX2-201ENST00000262829 TCP11L2Q8N4U5 519 aa20.45■□□□□ 0.86
RBFOX2-201ENST00000262829 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
RBFOX2-201ENST00000262829 RGPD5Q99666 1765 aa20.45■□□□□ 0.86
RBFOX2-201ENST00000262829 COL18A1P39060 1754 aa20.44■□□□□ 0.86
RBFOX2-201ENST00000262829 SF3B2Q13435 895 aaKnown RBP20.44■□□□□ 0.86
RBFOX2-201ENST00000262829 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
RBFOX2-201ENST00000262829 KCNH5Q8NCM2 988 aa20.43■□□□□ 0.86
RBFOX2-201ENST00000262829 NFAT5O94916 1531 aa20.42■□□□□ 0.86
RBFOX2-201ENST00000262829 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
RBFOX2-201ENST00000262829 CRB1P82279 1406 aa20.41■□□□□ 0.86
RBFOX2-201ENST00000262829 EDC4Q6P2E9 1401 aaKnown RBP20.41■□□□□ 0.86
RBFOX2-201ENST00000262829 CLSPNQ9HAW4 1339 aa20.4■□□□□ 0.86
RBFOX2-201ENST00000262829 PDE3BQ13370 1112 aa20.4■□□□□ 0.86
RBFOX2-201ENST00000262829 PUS7Q96PZ0 661 aaKnown RBP20.4■□□□□ 0.86
RBFOX2-201ENST00000262829 TRIM37O94972 964 aa20.39■□□□□ 0.85
RBFOX2-201ENST00000262829 CSB-PGBD3P0DP91 1061 aa20.39■□□□□ 0.85
RBFOX2-201ENST00000262829 TMF1P82094 1093 aa20.39■□□□□ 0.85
RBFOX2-201ENST00000262829 FBLN1P23142 703 aa20.38■□□□□ 0.85
RBFOX2-201ENST00000262829 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
RBFOX2-201ENST00000262829 USP31Q70CQ4 1352 aa20.38■□□□□ 0.85
RBFOX2-201ENST00000262829 EN1Q05925 392 aaPredicted RBP20.37■□□□□ 0.85
RBFOX2-201ENST00000262829 WDR17Q8IZU2 1322 aa20.37■□□□□ 0.85
RBFOX2-201ENST00000262829 THRAP3Q9Y2W1 955 aaKnown RBP20.36■□□□□ 0.85
RBFOX2-201ENST00000262829 FAM196AQ6ZSG2 479 aa20.35■□□□□ 0.85
RBFOX2-201ENST00000262829 LTN1O94822 1766 aa20.35■□□□□ 0.85
RBFOX2-201ENST00000262829 BAG6P46379 1132 aa20.34■□□□□ 0.85
RBFOX2-201ENST00000262829 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
RBFOX2-201ENST00000262829 NINLQ9Y2I6 1382 aa20.33■□□□□ 0.84
RBFOX2-201ENST00000262829 USP54Q70EL1 1684 aa20.33■□□□□ 0.84
RBFOX2-201ENST00000262829 OVOS2A0A0J9YW53 1432 aa20.32■□□□□ 0.84
RBFOX2-201ENST00000262829 OVOS2Q6IE36 1432 aa20.32■□□□□ 0.84
RBFOX2-201ENST00000262829 ANKRD36BQ8N2N9 1353 aa20.32■□□□□ 0.84
RBFOX2-201ENST00000262829 RGPD1P0DJD0 1748 aa20.32■□□□□ 0.84
RBFOX2-201ENST00000262829 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
RBFOX2-201ENST00000262829 TNS1Q9HBL0 1735 aaKnown RBP20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 PARP4Q9UKK3 1724 aaKnown RBP20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 DDB1Q16531 1140 aa20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 LTV1Q96GA3 475 aaPredicted RBP20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 COG3Q96JB2 828 aa20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 NLRP2Q9NX02 1062 aa20.31■□□□□ 0.84
RBFOX2-201ENST00000262829 APBA3O96018 575 aa20.3■□□□□ 0.84
RBFOX2-201ENST00000262829 EZH2Q15910 746 aaKnown RBP20.3■□□□□ 0.84
RBFOX2-201ENST00000262829 CARD10Q9BWT7 1032 aa20.3■□□□□ 0.84
RBFOX2-201ENST00000262829 LRRC37A3O60309 1634 aa20.3■□□□□ 0.84
RBFOX2-201ENST00000262829 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
RBFOX2-201ENST00000262829 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
RBFOX2-201ENST00000262829 FYB1O15117 783 aa20.28■□□□□ 0.84
RBFOX2-201ENST00000262829 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
RBFOX2-201ENST00000262829 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
RBFOX2-201ENST00000262829 PTF1AQ7RTS3 328 aa20.27■□□□□ 0.84
RBFOX2-201ENST00000262829 MARCH10Q8NA82 808 aaPredicted RBP20.27■□□□□ 0.84
RBFOX2-201ENST00000262829 ERBB3P21860 1342 aa20.27■□□□□ 0.84
RBFOX2-201ENST00000262829 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
RBFOX2-201ENST00000262829 HSPA5P11021 654 aaKnown RBP20.27■□□□□ 0.83
RBFOX2-201ENST00000262829 MYOM1P52179 1685 aa20.26■□□□□ 0.83
RBFOX2-201ENST00000262829 RRS1Q15050 365 aaKnown RBP20.26■□□□□ 0.83
RBFOX2-201ENST00000262829 MAP3K19Q56UN5 1328 aa20.26■□□□□ 0.83
RBFOX2-201ENST00000262829 CAMKK2Q96RR4 588 aa20.25■□□□□ 0.83
RBFOX2-201ENST00000262829 DISP2A7MBM2 1401 aa20.24■□□□□ 0.83
RBFOX2-201ENST00000262829 IP6K1Q92551 441 aa20.24■□□□□ 0.83
RBFOX2-201ENST00000262829 AMPHP49418 695 aa20.23■□□□□ 0.83
RBFOX2-201ENST00000262829 ABCC6O95255 1503 aa20.23■□□□□ 0.83
RBFOX2-201ENST00000262829 PEAK1Q9H792 1746 aa20.23■□□□□ 0.83
RBFOX2-201ENST00000262829 EIF4G2P78344 907 aaKnown RBP eCLIP20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 OVOS2A0A0G2JMS6 1433 aa20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 EXOC5O00471 708 aa20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 HOXC9P31274 260 aa20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 CDCA7Q9BWT1 371 aaPredicted RBP20.22■□□□□ 0.83
RBFOX2-201ENST00000262829 NSD3Q9BZ95 1437 aa20.21■□□□□ 0.83
RBFOX2-201ENST00000262829 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
RBFOX2-201ENST00000262829 KIF20BQ96Q89 1820 aa20.2■□□□□ 0.82
RBFOX2-201ENST00000262829 SBF2Q86WG5 1849 aa20.19■□□□□ 0.82
RBFOX2-201ENST00000262829 IL2RBP14784 551 aa20.18■□□□□ 0.82
RBFOX2-201ENST00000262829 RGPD2P0DJD1 1756 aa20.18■□□□□ 0.82
RBFOX2-201ENST00000262829 C11orf95C9JLR9 678 aaPredicted RBP20.17■□□□□ 0.82
RBFOX2-201ENST00000262829 KCNQ2O43526 872 aa20.17■□□□□ 0.82
RBFOX2-201ENST00000262829 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
RBFOX2-201ENST00000262829 ACSBG1Q96GR2 724 aa20.17■□□□□ 0.82
RBFOX2-201ENST00000262829 TNS2Q63HR2 1409 aa20.15■□□□□ 0.82
RBFOX2-201ENST00000262829 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
RBFOX2-201ENST00000262829 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
RBFOX2-201ENST00000262829 BCL11BQ9C0K0 894 aaPredicted RBP20.14■□□□□ 0.81
RBFOX2-201ENST00000262829 EMILIN1Q9Y6C2 1016 aa20.14■□□□□ 0.81
RBFOX2-201ENST00000262829 NPM3O75607 178 aaKnown RBP20.13■□□□□ 0.81
RBFOX2-201ENST00000262829 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
RBFOX2-201ENST00000262829 DDX54Q8TDD1 881 aaKnown RBP20.13■□□□□ 0.81
RBFOX2-201ENST00000262829 NBPF6Q5VWK0 638 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 NBPF4Q96M43 638 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 NUP188Q5SRE5 1749 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 KAT6BQ8WYB5 2073 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 RREB1Q92766 1687 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 PANK3Q9H999 370 aa20.12■□□□□ 0.81
RBFOX2-201ENST00000262829 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
RBFOX2-201ENST00000262829 PARD3Q8TEW0 1356 aa20.09■□□□□ 0.81
RBFOX2-201ENST00000262829 FAM208AQ9UK61 1670 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms