RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 OVOS2Q6IE36 1432 aa13.22□□□□□ -0.29
TTC39A-201ENST00000262675 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
TTC39A-201ENST00000262675 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.29
TTC39A-201ENST00000262675 NBPF1Q3BBV0 1214 aa13.21□□□□□ -0.3
TTC39A-201ENST00000262675 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.3
TTC39A-201ENST00000262675 EIF4G2P78344 907 aaKnown RBP eCLIP13.2□□□□□ -0.3
TTC39A-201ENST00000262675 NLRP6P59044 892 aa13.2□□□□□ -0.3
TTC39A-201ENST00000262675 KCNH5Q8NCM2 988 aa13.2□□□□□ -0.3
TTC39A-201ENST00000262675 ABCC6O95255 1503 aa13.19□□□□□ -0.3
TTC39A-201ENST00000262675 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
TTC39A-201ENST00000262675 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
TTC39A-201ENST00000262675 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 BCL9O00512 1426 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 PLSCR1O15162 318 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 LRRC37A3O60309 1634 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
TTC39A-201ENST00000262675 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 COL18A1P39060 1754 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 DDB1Q16531 1140 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 SPON1Q9HCB6 807 aa13.17□□□□□ -0.3
TTC39A-201ENST00000262675 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
TTC39A-201ENST00000262675 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
TTC39A-201ENST00000262675 WDR17Q8IZU2 1322 aa13.16□□□□□ -0.3
TTC39A-201ENST00000262675 CPSF1Q10570 1443 aaKnown RBP13.15□□□□□ -0.3
TTC39A-201ENST00000262675 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
TTC39A-201ENST00000262675 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
TTC39A-201ENST00000262675 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
TTC39A-201ENST00000262675 KCNQ2O43526 872 aa13.14□□□□□ -0.31
TTC39A-201ENST00000262675 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
TTC39A-201ENST00000262675 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
TTC39A-201ENST00000262675 PPP1R1BQ9UD71 204 aaPredicted RBP13.14□□□□□ -0.31
TTC39A-201ENST00000262675 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
TTC39A-201ENST00000262675 TTC21BQ7Z4L5 1316 aa13.13□□□□□ -0.31
TTC39A-201ENST00000262675 ZBTB7CA1YPR0 619 aa13.13□□□□□ -0.31
TTC39A-201ENST00000262675 ARHGEF25Q86VW2 580 aa13.13□□□□□ -0.31
TTC39A-201ENST00000262675 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
TTC39A-201ENST00000262675 SBNO2Q9Y2G9 1366 aa13.12□□□□□ -0.31
TTC39A-201ENST00000262675 NEFLP07196 543 aa13.12□□□□□ -0.31
TTC39A-201ENST00000262675 USP54Q70EL1 1684 aa13.12□□□□□ -0.31
TTC39A-201ENST00000262675 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
TTC39A-201ENST00000262675 MON2Q7Z3U7 1717 aa13.11□□□□□ -0.31
TTC39A-201ENST00000262675 CSB-PGBD3P0DP91 1061 aa13.1□□□□□ -0.31
TTC39A-201ENST00000262675 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
TTC39A-201ENST00000262675 EXOC5O00471 708 aa13.1□□□□□ -0.31
TTC39A-201ENST00000262675 NFAT5O94916 1531 aa13.1□□□□□ -0.31
TTC39A-201ENST00000262675 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
TTC39A-201ENST00000262675 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
TTC39A-201ENST00000262675 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
TTC39A-201ENST00000262675 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
TTC39A-201ENST00000262675 AXIN2Q9Y2T1 843 aa13.08□□□□□ -0.32
TTC39A-201ENST00000262675 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
TTC39A-201ENST00000262675 YY1P25490 414 aa13.07□□□□□ -0.32
TTC39A-201ENST00000262675 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
TTC39A-201ENST00000262675 STK32BQ9NY57 414 aa13.07□□□□□ -0.32
TTC39A-201ENST00000262675 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
TTC39A-201ENST00000262675 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
TTC39A-201ENST00000262675 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
TTC39A-201ENST00000262675 FAM208AQ9UK61 1670 aaKnown RBP13.04□□□□□ -0.32
TTC39A-201ENST00000262675 TXNRD1Q16881 649 aa13.04□□□□□ -0.32
TTC39A-201ENST00000262675 LTN1O94822 1766 aa13.04□□□□□ -0.32
TTC39A-201ENST00000262675 EDC4Q6P2E9 1401 aaKnown RBP13.03□□□□□ -0.32
TTC39A-201ENST00000262675 ERICH6BQ5W0A0 696 aa13.03□□□□□ -0.32
TTC39A-201ENST00000262675 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
TTC39A-201ENST00000262675 FKBP8Q14318 412 aa13.03□□□□□ -0.32
TTC39A-201ENST00000262675 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
TTC39A-201ENST00000262675 ANO8Q9HCE9 1232 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-201ENST00000262675 ERBB3P21860 1342 aa13.02□□□□□ -0.32
TTC39A-201ENST00000262675 IL2RBP14784 551 aa13.02□□□□□ -0.33
TTC39A-201ENST00000262675 SOX12O15370 315 aa13.01□□□□□ -0.33
TTC39A-201ENST00000262675 PROM2Q8N271 834 aa13.01□□□□□ -0.33
TTC39A-201ENST00000262675 MTFR1LQ9H019 292 aa13.01□□□□□ -0.33
TTC39A-201ENST00000262675 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
TTC39A-201ENST00000262675 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-201ENST00000262675 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
TTC39A-201ENST00000262675 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
TTC39A-201ENST00000262675 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13□□□□□ -0.33
TTC39A-201ENST00000262675 MYOM1P52179 1685 aa12.99□□□□□ -0.33
TTC39A-201ENST00000262675 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
TTC39A-201ENST00000262675 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
TTC39A-201ENST00000262675 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 BTAF1O14981 1849 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 PAPPAQ13219 1627 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 KIF7Q2M1P5 1343 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 PTGER2P43116 358 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
TTC39A-201ENST00000262675 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
TTC39A-201ENST00000262675 NME9Q86XW9 330 aa12.97□□□□□ -0.33
TTC39A-201ENST00000262675 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
TTC39A-201ENST00000262675 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
TTC39A-201ENST00000262675 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
TTC39A-201ENST00000262675 IP6K1Q92551 441 aa12.96□□□□□ -0.33
TTC39A-201ENST00000262675 USP47Q96K76 1375 aa12.95□□□□□ -0.34
TTC39A-201ENST00000262675 ATF5Q9Y2D1 282 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms