RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 BRWD3Q6RI45 1802 aa29.46■■■□□ 2.31
CCNE1-201ENST00000262643 COL5A2P05997 1499 aaPredicted RBP29.46■■■□□ 2.31
CCNE1-201ENST00000262643 AXIN2Q9Y2T1 843 aa29.45■■■□□ 2.31
CCNE1-201ENST00000262643 OVOS2A0A0J9YW53 1432 aa29.45■■■□□ 2.3
CCNE1-201ENST00000262643 OVOS2Q6IE36 1432 aa29.45■■■□□ 2.3
CCNE1-201ENST00000262643 COL18A1P39060 1754 aa29.44■■■□□ 2.3
CCNE1-201ENST00000262643 COG3Q96JB2 828 aa29.43■■■□□ 2.3
CCNE1-201ENST00000262643 RGPD5Q99666 1765 aa29.41■■■□□ 2.3
CCNE1-201ENST00000262643 CARD14Q9BXL6 1004 aa29.4■■■□□ 2.3
CCNE1-201ENST00000262643 GGNBP2Q9H3C7 697 aa29.39■■■□□ 2.3
CCNE1-201ENST00000262643 FYB1O15117 783 aa29.38■■■□□ 2.29
CCNE1-201ENST00000262643 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
CCNE1-201ENST00000262643 LTN1O94822 1766 aa29.38■■■□□ 2.29
CCNE1-201ENST00000262643 NSD3Q9BZ95 1437 aa29.37■■■□□ 2.29
CCNE1-201ENST00000262643 C11orf95C9JLR9 678 aaPredicted RBP29.37■■■□□ 2.29
CCNE1-201ENST00000262643 CRB1P82279 1406 aa29.37■■■□□ 2.29
CCNE1-201ENST00000262643 TOM1L2Q6ZVM7 507 aa29.37■■■□□ 2.29
CCNE1-201ENST00000262643 TCP11L2Q8N4U5 519 aa29.37■■■□□ 2.29
CCNE1-201ENST00000262643 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
CCNE1-201ENST00000262643 THSD7AQ9UPZ6 1657 aa29.35■■■□□ 2.29
CCNE1-201ENST00000262643 FBLN1P23142 703 aa29.35■■■□□ 2.29
CCNE1-201ENST00000262643 WDR17Q8IZU2 1322 aa29.34■■■□□ 2.29
CCNE1-201ENST00000262643 BARGINQ6ZT62 677 aa29.33■■■□□ 2.29
CCNE1-201ENST00000262643 KIF20BQ96Q89 1820 aa29.33■■■□□ 2.29
CCNE1-201ENST00000262643 THRAP3Q9Y2W1 955 aaKnown RBP29.32■■■□□ 2.28
CCNE1-201ENST00000262643 ABCC6O95255 1503 aa29.31■■■□□ 2.28
CCNE1-201ENST00000262643 FAM182BQ5T319 152 aa29.3■■■□□ 2.28
CCNE1-201ENST00000262643 PANK3Q9H999 370 aa29.28■■■□□ 2.28
CCNE1-201ENST00000262643 MAP3K19Q56UN5 1328 aa29.28■■■□□ 2.28
CCNE1-201ENST00000262643 ERBB3P21860 1342 aa29.26■■■□□ 2.28
CCNE1-201ENST00000262643 CGNL1Q0VF96 1302 aa29.26■■■□□ 2.27
CCNE1-201ENST00000262643 RRS1Q15050 365 aaKnown RBP29.25■■■□□ 2.27
CCNE1-201ENST00000262643 KIF7Q2M1P5 1343 aa29.25■■■□□ 2.27
CCNE1-201ENST00000262643 AMPHP49418 695 aa29.25■■■□□ 2.27
CCNE1-201ENST00000262643 ANKRD24Q8TF21 1146 aa29.25■■■□□ 2.27
CCNE1-201ENST00000262643 IP6K1Q92551 441 aa29.25■■■□□ 2.27
CCNE1-201ENST00000262643 CARD10Q9BWT7 1032 aa29.25■■■□□ 2.27
CCNE1-201ENST00000262643 PDE3BQ13370 1112 aa29.23■■■□□ 2.27
CCNE1-201ENST00000262643 LTV1Q96GA3 475 aaPredicted RBP29.23■■■□□ 2.27
CCNE1-201ENST00000262643 NLRP2Q9NX02 1062 aa29.23■■■□□ 2.27
CCNE1-201ENST00000262643 BLMP54132 1417 aaPredicted RBP29.22■■■□□ 2.27
CCNE1-201ENST00000262643 HOXC9P31274 260 aa29.21■■■□□ 2.27
CCNE1-201ENST00000262643 CCDC125Q86Z20 511 aa29.21■■■□□ 2.27
CCNE1-201ENST00000262643 PARP4Q9UKK3 1724 aaKnown RBP29.19■■■□□ 2.26
CCNE1-201ENST00000262643 CCDC7Q96M83 1385 aa29.17■■■□□ 2.26
CCNE1-201ENST00000262643 WNK3Q9BYP7 1800 aa29.17■■■□□ 2.26
CCNE1-201ENST00000262643 SF3B2Q13435 895 aaKnown RBP29.16■■■□□ 2.26
CCNE1-201ENST00000262643 DDB1Q16531 1140 aa29.16■■■□□ 2.26
CCNE1-201ENST00000262643 LRRC37A3O60309 1634 aa29.15■■■□□ 2.26
CCNE1-201ENST00000262643 DDX10Q13206 875 aaKnown RBP29.15■■■□□ 2.26
CCNE1-201ENST00000262643 CDCA7Q9BWT1 371 aaPredicted RBP29.15■■■□□ 2.26
CCNE1-201ENST00000262643 RTL1A6NKG5 1358 aa29.15■■■□□ 2.26
CCNE1-201ENST00000262643 FAM196AQ6ZSG2 479 aa29.14■■■□□ 2.26
CCNE1-201ENST00000262643 MIER1Q8N108 512 aa29.14■■■□□ 2.26
CCNE1-201ENST00000262643 TNNT2P45379 298 aaPredicted RBP29.12■■■□□ 2.25
CCNE1-201ENST00000262643 EMILIN1Q9Y6C2 1016 aa29.12■■■□□ 2.25
CCNE1-201ENST00000262643 DISP2A7MBM2 1401 aa29.12■■■□□ 2.25
CCNE1-201ENST00000262643 PPM1GO15355 546 aaPredicted RBP29.11■■■□□ 2.25
CCNE1-201ENST00000262643 DEFB132Q7Z7B7 95 aa29.11■■■□□ 2.25
CCNE1-201ENST00000262643 KNSTRNQ9Y448 316 aa29.11■■■□□ 2.25
CCNE1-201ENST00000262643 PEAK1Q9H792 1746 aa29.1■■■□□ 2.25
CCNE1-201ENST00000262643 HSP90AB2PQ58FF8 381 aa29.1■■■□□ 2.25
CCNE1-201ENST00000262643 ANKRD26Q9UPS8 1709 aa29.1■■■□□ 2.25
CCNE1-201ENST00000262643 WASHC2AQ641Q2 1341 aa29.09■■■□□ 2.25
CCNE1-201ENST00000262643 FLT4P35916 1363 aa29.09■■■□□ 2.25
CCNE1-201ENST00000262643 TRIM37O94972 964 aa29.09■■■□□ 2.25
CCNE1-201ENST00000262643 FAM208AQ9UK61 1670 aaKnown RBP29.09■■■□□ 2.25
CCNE1-201ENST00000262643 EXOC5O00471 708 aa29.08■■■□□ 2.25
CCNE1-201ENST00000262643 IL2RBP14784 551 aa29.08■■■□□ 2.25
CCNE1-201ENST00000262643 MAP2P11137 1827 aaKnown RBP29.08■■■□□ 2.25
CCNE1-201ENST00000262643 RGPD2P0DJD1 1756 aa29.07■■■□□ 2.24
CCNE1-201ENST00000262643 RGPD1P0DJD0 1748 aa29.06■■■□□ 2.24
CCNE1-201ENST00000262643 SMG6Q86US8 1419 aaKnown RBP29.06■■■□□ 2.24
CCNE1-201ENST00000262643 INSRP06213 1382 aa29.06■■■□□ 2.24
CCNE1-201ENST00000262643 NSD2O96028 1365 aa29.05■■■□□ 2.24
CCNE1-201ENST00000262643 KIF24Q5T7B8 1368 aa29.05■■■□□ 2.24
CCNE1-201ENST00000262643 OVOS2A0A0G2JMS6 1433 aa29.05■■■□□ 2.24
CCNE1-201ENST00000262643 MARCH10Q8NA82 808 aaPredicted RBP29.04■■■□□ 2.24
CCNE1-201ENST00000262643 BAG6P46379 1132 aa29.03■■■□□ 2.24
CCNE1-201ENST00000262643 POLKQ9UBT6 870 aa29.03■■■□□ 2.24
CCNE1-201ENST00000262643 MORC1Q86VD1 984 aa29.03■■■□□ 2.24
CCNE1-201ENST00000262643 NBPF6Q5VWK0 638 aa29.02■■■□□ 2.24
CCNE1-201ENST00000262643 NBPF4Q96M43 638 aa29.02■■■□□ 2.24
CCNE1-201ENST00000262643 TNS2Q63HR2 1409 aa29.02■■■□□ 2.24
CCNE1-201ENST00000262643 USHBP1Q8N6Y0 703 aa29.01■■■□□ 2.24
CCNE1-201ENST00000262643 TNS1Q9HBL0 1735 aaKnown RBP29.01■■■□□ 2.23
CCNE1-201ENST00000262643 AMER1Q5JTC6 1135 aaPredicted RBP29■■■□□ 2.23
CCNE1-201ENST00000262643 EN1Q05925 392 aaPredicted RBP28.99■■■□□ 2.23
CCNE1-201ENST00000262643 PER1O15534 1290 aaPredicted RBP28.98■■■□□ 2.23
CCNE1-201ENST00000262643 APBA3O96018 575 aa28.98■■■□□ 2.23
CCNE1-201ENST00000262643 CNGB1Q14028 1251 aaPredicted RBP28.94■■■□□ 2.22
CCNE1-201ENST00000262643 SBF2Q86WG5 1849 aa28.94■■■□□ 2.22
CCNE1-201ENST00000262643 CC2D1BQ5T0F9 858 aaKnown RBP28.94■■■□□ 2.22
CCNE1-201ENST00000262643 MEGF6O75095 1541 aa28.93■■■□□ 2.22
CCNE1-201ENST00000262643 DDX54Q8TDD1 881 aaKnown RBP28.93■■■□□ 2.22
CCNE1-201ENST00000262643 PTF1AQ7RTS3 328 aa28.91■■■□□ 2.22
CCNE1-201ENST00000262643 RAPGEF4Q8WZA2 1011 aa28.91■■■□□ 2.22
CCNE1-201ENST00000262643 EZH2Q15910 746 aaKnown RBP28.91■■■□□ 2.22
CCNE1-201ENST00000262643 BCL9O00512 1426 aa28.89■■■□□ 2.22
CCNE1-201ENST00000262643 EIF4A2Q14240 407 aaKnown RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms