RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 PROX2Q3B8N5 592 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 MAP7D1Q3KQU3 841 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 GLYCTKQ8IVS8 523 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 PLPP7Q8NBV4 271 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 ASB16Q96NS5 453 aa7.5□□□□□ -1.21
TCN1-201ENST00000257264 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
TCN1-201ENST00000257264 ATP1A2P50993 1020 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
TCN1-201ENST00000257264 TSNAXIP1Q2TAA8 658 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 Q3C1V9 767 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 TAS1R3Q7RTX0 852 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 KIAA1468Q9P260 1216 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 DCTN4Q9UJW0 460 aa7.49□□□□□ -1.21
TCN1-201ENST00000257264 CFHP08603 1231 aa7.48□□□□□ -1.21
TCN1-201ENST00000257264 NCLP19338 710 aaKnown RBP7.48□□□□□ -1.21
TCN1-201ENST00000257264 GPR153Q6NV75 609 aa7.48□□□□□ -1.21
TCN1-201ENST00000257264 ZNF687Q8N1G0 1237 aa7.48□□□□□ -1.21
TCN1-201ENST00000257264 PHTF2Q8N3S3 785 aa7.48□□□□□ -1.21
TCN1-201ENST00000257264 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
TCN1-201ENST00000257264 ZNF594Q96JF6 807 aaPredicted RBP7.48□□□□□ -1.21
TCN1-201ENST00000257264 DNAAF2Q9NVR5 837 aaKnown RBP7.48□□□□□ -1.21
TCN1-201ENST00000257264 ZCCHC6Q5VYS8 1495 aaKnown RBP7.47□□□□□ -1.21
TCN1-201ENST00000257264 PRMT3O60678 531 aa7.47□□□□□ -1.21
TCN1-201ENST00000257264 ERCC5P28715 1186 aaPredicted RBP7.47□□□□□ -1.21
TCN1-201ENST00000257264 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
TCN1-201ENST00000257264 CADPSQ9ULU8 1353 aa7.47□□□□□ -1.21
TCN1-201ENST00000257264 CLDN10P78369 228 aa7.46□□□□□ -1.21
TCN1-201ENST00000257264 KCNH2Q12809 1159 aa7.46□□□□□ -1.21
TCN1-201ENST00000257264 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.21
TCN1-201ENST00000257264 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.21
TCN1-201ENST00000257264 CXXC1Q9P0U4 656 aaPredicted RBP7.46□□□□□ -1.21
TCN1-201ENST00000257264 NOD1Q9Y239 953 aa7.46□□□□□ -1.21
TCN1-201ENST00000257264 RBM19Q9Y4C8 960 aaKnown RBP7.46□□□□□ -1.21
TCN1-201ENST00000257264 GPSM3Q9Y4H4 160 aa7.46□□□□□ -1.21
TCN1-201ENST00000257264 C21orf2O43822 256 aa7.46□□□□□ -1.22
TCN1-201ENST00000257264 CHMP4AQ9BY43 222 aa7.46□□□□□ -1.22
TCN1-201ENST00000257264 CHIC2Q9UKJ5 165 aa7.46□□□□□ -1.22
TCN1-201ENST00000257264 EIF5BO60841 1220 aaKnown RBP7.45□□□□□ -1.22
TCN1-201ENST00000257264 PTK2Q05397 1052 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 OCLNQ16625 522 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 KCNH8Q96L42 1107 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 PRIMPOLQ96LW4 560 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 PCDHB9Q9Y5E1 797 aa7.45□□□□□ -1.22
TCN1-201ENST00000257264 SCAMP3O14828 347 aaKnown RBP7.44□□□□□ -1.22
TCN1-201ENST00000257264 SEC13P55735 322 aa7.44□□□□□ -1.22
TCN1-201ENST00000257264 KMT5BQ4FZB7 885 aa7.44□□□□□ -1.22
TCN1-201ENST00000257264 SIX5Q8N196 739 aa7.44□□□□□ -1.22
TCN1-201ENST00000257264 BACH2Q9BYV9 841 aa7.44□□□□□ -1.22
TCN1-201ENST00000257264 F12P00748 615 aaPredicted RBP7.43□□□□□ -1.22
TCN1-201ENST00000257264 FKBP4Q02790 459 aaKnown RBP eCLIP7.43□□□□□ -1.22
TCN1-201ENST00000257264 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
TCN1-201ENST00000257264 MORN1Q5T089 497 aa7.43□□□□□ -1.22
TCN1-201ENST00000257264 GTF3C2Q8WUA4 911 aaPredicted RBP7.43□□□□□ -1.22
TCN1-201ENST00000257264 SLC27A5Q9Y2P5 690 aa7.43□□□□□ -1.22
TCN1-201ENST00000257264 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 ANKRD13AQ8IZ07 590 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 RGL4Q8IZJ4 473 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 KCNK17Q96T54 332 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 DKK1O94907 266 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 PDXDC2PQ6P474 469 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 PLA2G2EQ9NZK7 142 aa7.42□□□□□ -1.22
TCN1-201ENST00000257264 ZBTB7BO15156 539 aaPredicted RBP7.41□□□□□ -1.22
TCN1-201ENST00000257264 ARHGAP4P98171 946 aa7.41□□□□□ -1.22
TCN1-201ENST00000257264 HDLBPQ00341 1268 aaKnown RBP7.41□□□□□ -1.22
TCN1-201ENST00000257264 ECM1Q16610 540 aa7.41□□□□□ -1.22
TCN1-201ENST00000257264 ARMC2Q8NEN0 867 aa7.41□□□□□ -1.22
TCN1-201ENST00000257264 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.22
TCN1-201ENST00000257264 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
TCN1-201ENST00000257264 MAP10Q9P2G4 905 aa7.41□□□□□ -1.22
TCN1-201ENST00000257264 RABGEF1Q9UJ41 708 aa7.41□□□□□ -1.22
TCN1-201ENST00000257264 CTHP32929 405 aa7.4□□□□□ -1.22
TCN1-201ENST00000257264 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
TCN1-201ENST00000257264 CCDC102BQ68D86 513 aa7.4□□□□□ -1.22
TCN1-201ENST00000257264 PIK3R5Q8WYR1 880 aa7.4□□□□□ -1.22
TCN1-201ENST00000257264 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
TCN1-201ENST00000257264 SEPT9Q9UHD8 586 aaPredicted RBP7.4□□□□□ -1.22
TCN1-201ENST00000257264 DNMT3AQ9Y6K1 912 aaPredicted RBP7.4□□□□□ -1.22
TCN1-201ENST00000257264 ANKRD62A6NC57 917 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 FMNL1O95466 1100 aaPredicted RBP7.39□□□□□ -1.23
TCN1-201ENST00000257264 GTF2IP78347 998 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 PTPRNQ16849 979 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 FAM98CQ17RN3 349 aaKnown RBP7.39□□□□□ -1.23
TCN1-201ENST00000257264 PUS10Q3MIT2 529 aaKnown RBP7.39□□□□□ -1.23
TCN1-201ENST00000257264 DPH6Q7L8W6 267 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 SEPT3Q9UH03 358 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 KIAA1024Q9UPX6 916 aa7.39□□□□□ -1.23
TCN1-201ENST00000257264 ITGAEP38570 1179 aa7.38□□□□□ -1.23
TCN1-201ENST00000257264 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
TCN1-201ENST00000257264 C9orf131Q5VYM1 1079 aa7.38□□□□□ -1.23
TCN1-201ENST00000257264 SAMD7Q7Z3H4 446 aa7.38□□□□□ -1.23
TCN1-201ENST00000257264 ACTN4O43707 911 aaKnown RBP7.37□□□□□ -1.23
TCN1-201ENST00000257264 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
TCN1-201ENST00000257264 RNF40O75150 1001 aa7.37□□□□□ -1.23
TCN1-201ENST00000257264 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
TCN1-201ENST00000257264 TPCN2Q8NHX9 752 aa7.37□□□□□ -1.23
TCN1-201ENST00000257264 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
TCN1-201ENST00000257264 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
TCN1-201ENST00000257264 SFI1A8K8P3 1242 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms