RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
NIP7-201ENST00000254940 USHBP1Q8N6Y0 703 aa16.19■□□□□ 0.18
NIP7-201ENST00000254940 BRD4O60885 1362 aaPredicted RBP16.19■□□□□ 0.18
NIP7-201ENST00000254940 JCADQ9P266 1359 aa16.19■□□□□ 0.18
NIP7-201ENST00000254940 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
NIP7-201ENST00000254940 SLIT3O75094 1523 aa16.18■□□□□ 0.18
NIP7-201ENST00000254940 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
NIP7-201ENST00000254940 LRP6O75581 1613 aa16.18■□□□□ 0.18
NIP7-201ENST00000254940 U2SURPO15042 1029 aaKnown RBP16.17■□□□□ 0.18
NIP7-201ENST00000254940 HOXC9P31274 260 aa16.17■□□□□ 0.18
NIP7-201ENST00000254940 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
NIP7-201ENST00000254940 ILDR1Q86SU0 546 aaPredicted RBP16.17■□□□□ 0.18
NIP7-201ENST00000254940 USP35Q9P2H5 1018 aa16.17■□□□□ 0.18
NIP7-201ENST00000254940 FKBP8Q14318 412 aa16.16■□□□□ 0.18
NIP7-201ENST00000254940 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
NIP7-201ENST00000254940 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
NIP7-201ENST00000254940 HMOX1P09601 288 aa16.15■□□□□ 0.18
NIP7-201ENST00000254940 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
NIP7-201ENST00000254940 SHPRHQ149N8 1683 aa16.14■□□□□ 0.18
NIP7-201ENST00000254940 CSB-PGBD3P0DP91 1061 aa16.14■□□□□ 0.17
NIP7-201ENST00000254940 NGLY1Q96IV0 654 aa16.14■□□□□ 0.17
NIP7-201ENST00000254940 USP54Q70EL1 1684 aa16.14■□□□□ 0.17
NIP7-201ENST00000254940 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
NIP7-201ENST00000254940 COL22A1Q8NFW1 1626 aaPredicted RBP16.13■□□□□ 0.17
NIP7-201ENST00000254940 AATKQ6ZMQ8 1374 aa16.13■□□□□ 0.17
NIP7-201ENST00000254940 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
NIP7-201ENST00000254940 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
NIP7-201ENST00000254940 AEBP1Q8IUX7 1158 aa16.12■□□□□ 0.17
NIP7-201ENST00000254940 IP6K1Q92551 441 aa16.12■□□□□ 0.17
NIP7-201ENST00000254940 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 FLT4P35916 1363 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 DIAPH1O60610 1272 aaKnown RBP16.11■□□□□ 0.17
NIP7-201ENST00000254940 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
NIP7-201ENST00000254940 EVA1CP58658 441 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
NIP7-201ENST00000254940 NLRP2Q9NX02 1062 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
NIP7-201ENST00000254940 LARP1Q6PKG0 1096 aaKnown RBP16.1■□□□□ 0.17
NIP7-201ENST00000254940 CCDC9Q9Y3X0 531 aaKnown RBP16.1■□□□□ 0.17
NIP7-201ENST00000254940 MYT1Q01538 1121 aa16.09■□□□□ 0.17
NIP7-201ENST00000254940 COL18A1P39060 1754 aa16.09■□□□□ 0.17
NIP7-201ENST00000254940 IL13P35225 146 aa16.09■□□□□ 0.17
NIP7-201ENST00000254940 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
NIP7-201ENST00000254940 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
NIP7-201ENST00000254940 COL3A1P02461 1466 aaPredicted RBP16.08■□□□□ 0.17
NIP7-201ENST00000254940 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.16
NIP7-201ENST00000254940 WDR43Q15061 677 aaKnown RBP eCLIP16.08■□□□□ 0.16
NIP7-201ENST00000254940 EYA1Q99502 592 aa16.08■□□□□ 0.16
NIP7-201ENST00000254940 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
NIP7-201ENST00000254940 TOM1L2Q6ZVM7 507 aa16.07■□□□□ 0.16
NIP7-201ENST00000254940 CPDO75976 1380 aa16.07■□□□□ 0.16
NIP7-201ENST00000254940 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
NIP7-201ENST00000254940 SPATA31A6Q5VVP1 1343 aa16.07■□□□□ 0.16
NIP7-201ENST00000254940 SULT6B1Q6IMI4 303 aa16.07■□□□□ 0.16
NIP7-201ENST00000254940 SMG6Q86US8 1419 aaKnown RBP16.06■□□□□ 0.16
NIP7-201ENST00000254940 AFF2P51816 1311 aa16.06■□□□□ 0.16
NIP7-201ENST00000254940 INSRP06213 1382 aa16.05■□□□□ 0.16
NIP7-201ENST00000254940 ERBB3P21860 1342 aa16.05■□□□□ 0.16
NIP7-201ENST00000254940 USP21Q9UK80 565 aa16.05■□□□□ 0.16
NIP7-201ENST00000254940 RRP7AQ9Y3A4 280 aaKnown RBP16.04■□□□□ 0.16
NIP7-201ENST00000254940 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
NIP7-201ENST00000254940 COL5A2P05997 1499 aaPredicted RBP16.04■□□□□ 0.16
NIP7-201ENST00000254940 NEUROD2Q15784 382 aa16.04■□□□□ 0.16
NIP7-201ENST00000254940 CDCA7LQ96GN5 454 aa16.04■□□□□ 0.16
NIP7-201ENST00000254940 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
NIP7-201ENST00000254940 RTL1A6NKG5 1358 aa16.02■□□□□ 0.16
NIP7-201ENST00000254940 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
NIP7-201ENST00000254940 PRKAR2BP31323 418 aa16.02■□□□□ 0.15
NIP7-201ENST00000254940 A0A0G2JS52 829 aa16.01■□□□□ 0.15
NIP7-201ENST00000254940 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
NIP7-201ENST00000254940 WDR17Q8IZU2 1322 aa16■□□□□ 0.15
NIP7-201ENST00000254940 BLMP54132 1417 aaPredicted RBP16■□□□□ 0.15
NIP7-201ENST00000254940 BCL9LQ86UU0 1499 aa16■□□□□ 0.15
NIP7-201ENST00000254940 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
NIP7-201ENST00000254940 SLIT2O94813 1529 aa15.98■□□□□ 0.15
NIP7-201ENST00000254940 NEFLP07196 543 aa15.98■□□□□ 0.15
NIP7-201ENST00000254940 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
NIP7-201ENST00000254940 RSPH6AQ9H0K4 717 aa15.98■□□□□ 0.15
NIP7-201ENST00000254940 NRAPQ86VF7 1730 aa15.98■□□□□ 0.15
NIP7-201ENST00000254940 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
NIP7-201ENST00000254940 PHF23Q9BUL5 403 aaPredicted RBP15.97■□□□□ 0.15
NIP7-201ENST00000254940 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
NIP7-201ENST00000254940 APAF1O14727 1248 aa15.96■□□□□ 0.15
NIP7-201ENST00000254940 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
NIP7-201ENST00000254940 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
NIP7-201ENST00000254940 KIF24Q5T7B8 1368 aa15.96■□□□□ 0.15
NIP7-201ENST00000254940 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.14
NIP7-201ENST00000254940 FAM182BQ5T319 152 aa15.95■□□□□ 0.14
NIP7-201ENST00000254940 MEGF6O75095 1541 aa15.95■□□□□ 0.14
NIP7-201ENST00000254940 RGS17Q9UGC6 210 aaPredicted RBP15.95■□□□□ 0.14
NIP7-201ENST00000254940 CRB1P82279 1406 aa15.94■□□□□ 0.14
NIP7-201ENST00000254940 FAM208AQ9UK61 1670 aaKnown RBP15.93■□□□□ 0.14
NIP7-201ENST00000254940 DDX54Q8TDD1 881 aaKnown RBP15.93■□□□□ 0.14
NIP7-201ENST00000254940 RAPGEF4Q8WZA2 1011 aa15.93■□□□□ 0.14
NIP7-201ENST00000254940 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
NIP7-201ENST00000254940 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
NIP7-201ENST00000254940 SPATA31A1Q5TZJ5 1347 aa15.93■□□□□ 0.14
NIP7-201ENST00000254940 DCTN1Q14203 1278 aa15.93■□□□□ 0.14
NIP7-201ENST00000254940 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms