RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 YTHDC1Q96MU7 727 aaKnown RBP34.91■■■■□ 3.18
TOMM40-201ENST00000252487 EIF4A2Q14240 407 aaKnown RBP34.9■■■■□ 3.18
TOMM40-201ENST00000252487 IP6K1Q92551 441 aa34.9■■■■□ 3.18
TOMM40-201ENST00000252487 COL18A1P39060 1754 aa34.9■■■■□ 3.18
TOMM40-201ENST00000252487 LTV1Q96GA3 475 aaPredicted RBP34.89■■■■□ 3.18
TOMM40-201ENST00000252487 ADAMTS8Q9UP79 889 aa34.89■■■■□ 3.18
TOMM40-201ENST00000252487 U2SURPO15042 1029 aaKnown RBP34.89■■■■□ 3.18
TOMM40-201ENST00000252487 IL13P35225 146 aa34.89■■■■□ 3.18
TOMM40-201ENST00000252487 AXIN2Q9Y2T1 843 aa34.89■■■■□ 3.18
TOMM40-201ENST00000252487 CPDO75976 1380 aa34.89■■■■□ 3.18
TOMM40-201ENST00000252487 KIF24Q5T7B8 1368 aa34.89■■■■□ 3.18
TOMM40-201ENST00000252487 JCADQ9P266 1359 aa34.87■■■■□ 3.17
TOMM40-201ENST00000252487 NUTM2BA6NNL0 878 aaPredicted RBP34.86■■■■□ 3.17
TOMM40-201ENST00000252487 NUTM2EB1AL46 878 aaPredicted RBP34.86■■■■□ 3.17
TOMM40-201ENST00000252487 NUTM2AQ8IVF1 878 aaPredicted RBP34.86■■■■□ 3.17
TOMM40-201ENST00000252487 PRDM11Q9NQV5 511 aa34.86■■■■□ 3.17
TOMM40-201ENST00000252487 SENP3-EIF4A1A0A087X0R7 540 aa34.84■■■■□ 3.17
TOMM40-201ENST00000252487 U2AF1L5P0DN76 240 aaPredicted RBP34.84■■■■□ 3.17
TOMM40-201ENST00000252487 U2AF1Q01081 240 aaKnown RBP eCLIP34.84■■■■□ 3.17
TOMM40-201ENST00000252487 NUDCQ9Y266 331 aa34.82■■■■□ 3.16
TOMM40-201ENST00000252487 ADAMTS2O95450 1211 aa34.81■■■■□ 3.16
TOMM40-201ENST00000252487 LMO7Q8WWI1 1683 aa34.8■■■■□ 3.16
TOMM40-201ENST00000252487 RGPD2P0DJD1 1756 aa34.8■■■■□ 3.16
TOMM40-201ENST00000252487 RGPD1P0DJD0 1748 aa34.79■■■■□ 3.16
TOMM40-201ENST00000252487 BLMP54132 1417 aaPredicted RBP34.79■■■■□ 3.16
TOMM40-201ENST00000252487 FAM83GA6ND36 823 aa34.79■■■■□ 3.16
TOMM40-201ENST00000252487 CCDC146Q8IYE0 955 aa34.78■■■■□ 3.16
TOMM40-201ENST00000252487 ANKRD24Q8TF21 1146 aa34.78■■■■□ 3.16
TOMM40-201ENST00000252487 CAMTA1Q9Y6Y1 1673 aa34.77■■■■□ 3.16
TOMM40-201ENST00000252487 HMOX1P09601 288 aa34.77■■■■□ 3.16
TOMM40-201ENST00000252487 ABCC6O95255 1503 aa34.76■■■■□ 3.16
TOMM40-201ENST00000252487 AEBP1Q8IUX7 1158 aa34.74■■■■□ 3.15
TOMM40-201ENST00000252487 EYA1Q99502 592 aa34.74■■■■□ 3.15
TOMM40-201ENST00000252487 COL14A1Q05707 1796 aaKnown RBP34.73■■■■□ 3.15
TOMM40-201ENST00000252487 LRP6O75581 1613 aa34.73■■■■□ 3.15
TOMM40-201ENST00000252487 USHBP1Q8N6Y0 703 aa34.72■■■■□ 3.15
TOMM40-201ENST00000252487 ERBB3P21860 1342 aa34.72■■■■□ 3.15
TOMM40-201ENST00000252487 SULT6B1Q6IMI4 303 aa34.69■■■■□ 3.14
TOMM40-201ENST00000252487 PLCH1Q4KWH8 1693 aa34.69■■■■□ 3.14
TOMM40-201ENST00000252487 NBPF6Q5VWK0 638 aa34.69■■■■□ 3.14
TOMM40-201ENST00000252487 NBPF4Q96M43 638 aa34.69■■■■□ 3.14
TOMM40-201ENST00000252487 COL5A2P05997 1499 aaPredicted RBP34.68■■■■□ 3.14
TOMM40-201ENST00000252487 IGSF1Q8N6C5 1336 aa34.68■■■■□ 3.14
TOMM40-201ENST00000252487 SPATA31A6Q5VVP1 1343 aa34.67■■■■□ 3.14
TOMM40-201ENST00000252487 HNRNPUQ00839 825 aaKnown RBP eCLIP34.67■■■■□ 3.14
TOMM40-201ENST00000252487 RSPH6AQ9H0K4 717 aa34.67■■■■□ 3.14
TOMM40-201ENST00000252487 BTG4Q9NY30 223 aa34.67■■■■□ 3.14
TOMM40-201ENST00000252487 CSB-PGBD3P0DP91 1061 aa34.66■■■■□ 3.14
TOMM40-201ENST00000252487 FBXO41Q8TF61 875 aa34.65■■■■□ 3.14
TOMM40-201ENST00000252487 STRN4Q9NRL3 753 aa34.65■■■■□ 3.14
TOMM40-201ENST00000252487 PRKAR2BP31323 418 aa34.64■■■■□ 3.14
TOMM40-201ENST00000252487 PLEKHF1Q96S99 279 aa34.62■■■■□ 3.13
TOMM40-201ENST00000252487 NLRP2Q9NX02 1062 aa34.62■■■■□ 3.13
TOMM40-201ENST00000252487 FCHSD2O94868 740 aa34.61■■■■□ 3.13
TOMM40-201ENST00000252487 FAM208AQ9UK61 1670 aaKnown RBP34.61■■■■□ 3.13
TOMM40-201ENST00000252487 RUNDC1Q96C34 613 aa34.61■■■■□ 3.13
TOMM40-201ENST00000252487 C8orf37Q96NL8 207 aa34.6■■■■□ 3.13
TOMM40-201ENST00000252487 SALL2Q9Y467 1007 aaPredicted RBP34.6■■■■□ 3.13
TOMM40-201ENST00000252487 KDRP35968 1356 aa34.59■■■■□ 3.13
TOMM40-201ENST00000252487 WDR17Q8IZU2 1322 aa34.59■■■■□ 3.13
TOMM40-201ENST00000252487 APAF1O14727 1248 aa34.58■■■■□ 3.13
TOMM40-201ENST00000252487 EVA1CP58658 441 aa34.58■■■■□ 3.13
TOMM40-201ENST00000252487 LARP1Q6PKG0 1096 aaKnown RBP34.58■■■■□ 3.13
TOMM40-201ENST00000252487 PHACTR3Q96KR7 559 aa34.58■■■■□ 3.13
TOMM40-201ENST00000252487 NRAPQ86VF7 1730 aa34.58■■■■□ 3.13
TOMM40-201ENST00000252487 TOM1L2Q6ZVM7 507 aa34.55■■■■□ 3.12
TOMM40-201ENST00000252487 RRP7AQ9Y3A4 280 aaKnown RBP34.55■■■■□ 3.12
TOMM40-201ENST00000252487 NCAPD2Q15021 1401 aa34.55■■■■□ 3.12
TOMM40-201ENST00000252487 MAPK8IP3Q9UPT6 1336 aa34.54■■■■□ 3.12
TOMM40-201ENST00000252487 TCP11L2Q8N4U5 519 aa34.53■■■■□ 3.12
TOMM40-201ENST00000252487 NGLY1Q96IV0 654 aa34.53■■■■□ 3.12
TOMM40-201ENST00000252487 SLIT2O94813 1529 aa34.53■■■■□ 3.12
TOMM40-201ENST00000252487 MEX3CQ5U5Q3 659 aaKnown RBP34.52■■■■□ 3.12
TOMM40-201ENST00000252487 NWD2Q9ULI1 1742 aa34.52■■■■□ 3.12
TOMM40-201ENST00000252487 NEUROD2Q15784 382 aa34.51■■■■□ 3.12
TOMM40-201ENST00000252487 PNNQ9H307 717 aaKnown RBP34.5■■■■□ 3.11
TOMM40-201ENST00000252487 USP35Q9P2H5 1018 aa34.48■■■■□ 3.11
TOMM40-201ENST00000252487 CRB1P82279 1406 aa34.47■■■■□ 3.11
TOMM40-201ENST00000252487 MEGF6O75095 1541 aa34.45■■■■□ 3.11
TOMM40-201ENST00000252487 BCL9LQ86UU0 1499 aa34.44■■■■□ 3.1
TOMM40-201ENST00000252487 NEFMP07197 916 aa34.44■■■■□ 3.1
TOMM40-201ENST00000252487 CARD10Q9BWT7 1032 aa34.44■■■■□ 3.1
TOMM40-201ENST00000252487 TMPOP42166 694 aaKnown RBP34.44■■■■□ 3.1
TOMM40-201ENST00000252487 DLG5Q8TDM6 1919 aa34.43■■■■□ 3.1
TOMM40-201ENST00000252487 ZBED9Q6R2W3 1325 aa34.42■■■■□ 3.1
TOMM40-201ENST00000252487 FNBP4Q8N3X1 1017 aaPredicted RBP34.41■■■■□ 3.1
TOMM40-201ENST00000252487 NFE2L2Q16236 605 aa34.41■■■■□ 3.1
TOMM40-201ENST00000252487 MTHFSDQ2M296 383 aaKnown RBP34.41■■■■□ 3.1
TOMM40-201ENST00000252487 UNC5CLQ8IV45 518 aa34.41■■■■□ 3.1
TOMM40-201ENST00000252487 RAPGEF4Q8WZA2 1011 aa34.39■■■■□ 3.1
TOMM40-201ENST00000252487 AFF2P51816 1311 aa34.39■■■■□ 3.1
TOMM40-201ENST00000252487 USP21Q9UK80 565 aa34.38■■■■□ 3.09
TOMM40-201ENST00000252487 RIPK4P57078 832 aa34.38■■■■□ 3.09
TOMM40-201ENST00000252487 CCDC9Q9Y3X0 531 aaKnown RBP34.36■■■■□ 3.09
TOMM40-201ENST00000252487 TATP17735 454 aaPredicted RBP34.35■■■■□ 3.09
TOMM40-201ENST00000252487 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.35■■■■□ 3.09
TOMM40-201ENST00000252487 PARP4Q9UKK3 1724 aaKnown RBP34.35■■■■□ 3.09
TOMM40-201ENST00000252487 TRIM35Q9UPQ4 493 aa34.34■■■■□ 3.09
TOMM40-201ENST00000252487 SPATA31A1Q5TZJ5 1347 aa34.34■■■■□ 3.09
TOMM40-201ENST00000252487 WNK3Q9BYP7 1800 aa34.33■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms