RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
PDZD11-201ENST00000239666 PHRF1Q9P1Y6 1649 aaKnown RBP18■□□□□ 0.47
PDZD11-201ENST00000239666 NRAPQ86VF7 1730 aa18■□□□□ 0.47
PDZD11-201ENST00000239666 USP19O94966 1318 aa17.99■□□□□ 0.47
PDZD11-201ENST00000239666 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
PDZD11-201ENST00000239666 USP6P35125 1406 aa17.99■□□□□ 0.47
PDZD11-201ENST00000239666 FAM98CQ17RN3 349 aaKnown RBP17.99■□□□□ 0.47
PDZD11-201ENST00000239666 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
PDZD11-201ENST00000239666 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
PDZD11-201ENST00000239666 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
PDZD11-201ENST00000239666 TIMELESSQ9UNS1 1208 aa17.98■□□□□ 0.47
PDZD11-201ENST00000239666 BRWD3Q6RI45 1802 aa17.97■□□□□ 0.47
PDZD11-201ENST00000239666 SPATA31A1Q5TZJ5 1347 aa17.97■□□□□ 0.47
PDZD11-201ENST00000239666 BARGINQ6ZT62 677 aa17.96■□□□□ 0.47
PDZD11-201ENST00000239666 STRN4Q9NRL3 753 aa17.96■□□□□ 0.47
PDZD11-201ENST00000239666 BAG6P46379 1132 aa17.95■□□□□ 0.46
PDZD11-201ENST00000239666 CHRNA2Q15822 529 aa17.95■□□□□ 0.46
PDZD11-201ENST00000239666 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
PDZD11-201ENST00000239666 HDGFL2Q7Z4V5 671 aaPredicted RBP17.94■□□□□ 0.46
PDZD11-201ENST00000239666 TERF2IPQ9NYB0 399 aa17.94■□□□□ 0.46
PDZD11-201ENST00000239666 EP400Q96L91 3159 aa17.94■□□□□ 0.46
PDZD11-201ENST00000239666 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
PDZD11-201ENST00000239666 PDE3BQ13370 1112 aa17.93■□□□□ 0.46
PDZD11-201ENST00000239666 FAM196AQ6ZSG2 479 aa17.93■□□□□ 0.46
PDZD11-201ENST00000239666 TCP11L2Q8N4U5 519 aa17.93■□□□□ 0.46
PDZD11-201ENST00000239666 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
PDZD11-201ENST00000239666 AATKQ6ZMQ8 1374 aa17.92■□□□□ 0.46
PDZD11-201ENST00000239666 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
PDZD11-201ENST00000239666 NRKQ7Z2Y5 1582 aa17.92■□□□□ 0.46
PDZD11-201ENST00000239666 SPOCK2Q92563 424 aa17.92■□□□□ 0.46
PDZD11-201ENST00000239666 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
PDZD11-201ENST00000239666 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
PDZD11-201ENST00000239666 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
PDZD11-201ENST00000239666 CPSF1Q10570 1443 aaKnown RBP17.9■□□□□ 0.46
PDZD11-201ENST00000239666 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
PDZD11-201ENST00000239666 CDCA7Q9BWT1 371 aaPredicted RBP17.9■□□□□ 0.46
PDZD11-201ENST00000239666 TMC1Q8TDI8 760 aa17.89■□□□□ 0.45
PDZD11-201ENST00000239666 SLIT3O75094 1523 aa17.88■□□□□ 0.45
PDZD11-201ENST00000239666 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
PDZD11-201ENST00000239666 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
PDZD11-201ENST00000239666 CRB1P82279 1406 aa17.88■□□□□ 0.45
PDZD11-201ENST00000239666 THSD7AQ9UPZ6 1657 aa17.87■□□□□ 0.45
PDZD11-201ENST00000239666 CAMTA1Q9Y6Y1 1673 aa17.87■□□□□ 0.45
PDZD11-201ENST00000239666 LMO7Q8WWI1 1683 aa17.87■□□□□ 0.45
PDZD11-201ENST00000239666 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
PDZD11-201ENST00000239666 LARP1Q6PKG0 1096 aaKnown RBP17.86■□□□□ 0.45
PDZD11-201ENST00000239666 ZBTB7CA1YPR0 619 aa17.85■□□□□ 0.45
PDZD11-201ENST00000239666 COL5A2P05997 1499 aaPredicted RBP17.85■□□□□ 0.45
PDZD11-201ENST00000239666 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
PDZD11-201ENST00000239666 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
PDZD11-201ENST00000239666 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
PDZD11-201ENST00000239666 PIK3C2AO00443 1686 aa17.84■□□□□ 0.45
PDZD11-201ENST00000239666 USP31Q70CQ4 1352 aa17.84■□□□□ 0.45
PDZD11-201ENST00000239666 TMF1P82094 1093 aa17.84■□□□□ 0.45
PDZD11-201ENST00000239666 ABCC6O95255 1503 aa17.83■□□□□ 0.45
PDZD11-201ENST00000239666 EDC4Q6P2E9 1401 aaKnown RBP17.83■□□□□ 0.45
PDZD11-201ENST00000239666 PARD3Q8TEW0 1356 aa17.83■□□□□ 0.45
PDZD11-201ENST00000239666 WDR17Q8IZU2 1322 aa17.83■□□□□ 0.44
PDZD11-201ENST00000239666 CHADLQ6NUI6 762 aa17.83■□□□□ 0.44
PDZD11-201ENST00000239666 MON2Q7Z3U7 1717 aa17.83■□□□□ 0.44
PDZD11-201ENST00000239666 ST20-MTHFSA0A0A6YYL1 179 aa17.82■□□□□ 0.44
PDZD11-201ENST00000239666 CSB-PGBD3P0DP91 1061 aa17.82■□□□□ 0.44
PDZD11-201ENST00000239666 DEFB132Q7Z7B7 95 aa17.82■□□□□ 0.44
PDZD11-201ENST00000239666 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
PDZD11-201ENST00000239666 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
PDZD11-201ENST00000239666 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDZD11-201ENST00000239666 DDB1Q16531 1140 aa17.8■□□□□ 0.44
PDZD11-201ENST00000239666 CARD10Q9BWT7 1032 aa17.8■□□□□ 0.44
PDZD11-201ENST00000239666 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
PDZD11-201ENST00000239666 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
PDZD11-201ENST00000239666 PARP4Q9UKK3 1724 aaKnown RBP17.78■□□□□ 0.44
PDZD11-201ENST00000239666 TESK2Q96S53 571 aa17.78■□□□□ 0.44
PDZD11-201ENST00000239666 USP54Q70EL1 1684 aa17.77■□□□□ 0.44
PDZD11-201ENST00000239666 APBA3O96018 575 aa17.77■□□□□ 0.44
PDZD11-201ENST00000239666 PIP4P2Q8N4L2 257 aa17.77■□□□□ 0.44
PDZD11-201ENST00000239666 COL18A1P39060 1754 aa17.76■□□□□ 0.43
PDZD11-201ENST00000239666 EXOC5O00471 708 aa17.76■□□□□ 0.43
PDZD11-201ENST00000239666 TRIM37O94972 964 aa17.76■□□□□ 0.43
PDZD11-201ENST00000239666 COG3Q96JB2 828 aa17.76■□□□□ 0.43
PDZD11-201ENST00000239666 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 OVOS2A0A0J9YW53 1432 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 OVOS2Q6IE36 1432 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 SOX12O15370 315 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 MNX1P50219 401 aaPredicted RBP17.75■□□□□ 0.43
PDZD11-201ENST00000239666 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
PDZD11-201ENST00000239666 NBPF14Q5TI25 921 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 AXIN2Q9Y2T1 843 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 A0A1W2PP64 1363 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 USP47Q96K76 1375 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
PDZD11-201ENST00000239666 FAM182BQ5T319 152 aa17.74■□□□□ 0.43
PDZD11-201ENST00000239666 PCGF6Q9BYE7 350 aa17.74■□□□□ 0.43
PDZD11-201ENST00000239666 NFAT5O94916 1531 aa17.73■□□□□ 0.43
PDZD11-201ENST00000239666 NME9Q86XW9 330 aa17.73■□□□□ 0.43
PDZD11-201ENST00000239666 ANKRD36BQ8N2N9 1353 aa17.73■□□□□ 0.43
PDZD11-201ENST00000239666 BCL9O00512 1426 aa17.72■□□□□ 0.43
PDZD11-201ENST00000239666 CAMKK2Q96RR4 588 aa17.71■□□□□ 0.43
PDZD11-201ENST00000239666 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
PDZD11-201ENST00000239666 PLSCR1O15162 318 aa17.7■□□□□ 0.42
PDZD11-201ENST00000239666 BCL11BQ9C0K0 894 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms