RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 PARP4Q9UKK3 1724 aaKnown RBP12.36□□□□□ -0.43
IFT43-201ENST00000238628 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
IFT43-201ENST00000238628 ATP7BP35670 1465 aa12.34□□□□□ -0.43
IFT43-201ENST00000238628 MARCH10Q8NA82 808 aaPredicted RBP12.33□□□□□ -0.44
IFT43-201ENST00000238628 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
IFT43-201ENST00000238628 KIF3CO14782 793 aa12.32□□□□□ -0.44
IFT43-201ENST00000238628 HIRIP3Q9BW71 556 aaPredicted RBP12.32□□□□□ -0.44
IFT43-201ENST00000238628 PRR36Q9H6K5 1346 aa12.31□□□□□ -0.44
IFT43-201ENST00000238628 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
IFT43-201ENST00000238628 CRB1P82279 1406 aa12.3□□□□□ -0.44
IFT43-201ENST00000238628 ZNF827Q17R98 1081 aa12.3□□□□□ -0.44
IFT43-201ENST00000238628 WWC3Q9ULE0 1092 aa12.3□□□□□ -0.44
IFT43-201ENST00000238628 ADCY9O60503 1353 aa12.3□□□□□ -0.44
IFT43-201ENST00000238628 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
IFT43-201ENST00000238628 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
IFT43-201ENST00000238628 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
IFT43-201ENST00000238628 TOM1L2Q6ZVM7 507 aa12.29□□□□□ -0.44
IFT43-201ENST00000238628 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
IFT43-201ENST00000238628 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
IFT43-201ENST00000238628 BCL9O00512 1426 aa12.28□□□□□ -0.44
IFT43-201ENST00000238628 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
IFT43-201ENST00000238628 TRAK1Q9UPV9 953 aa12.28□□□□□ -0.44
IFT43-201ENST00000238628 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
IFT43-201ENST00000238628 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
IFT43-201ENST00000238628 CPDO75976 1380 aa12.28□□□□□ -0.44
IFT43-201ENST00000238628 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.44
IFT43-201ENST00000238628 TOMM70O94826 608 aa12.27□□□□□ -0.45
IFT43-201ENST00000238628 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
IFT43-201ENST00000238628 CDCA7Q9BWT1 371 aaPredicted RBP12.27□□□□□ -0.45
IFT43-201ENST00000238628 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
IFT43-201ENST00000238628 WASLO00401 505 aaPredicted RBP12.26□□□□□ -0.45
IFT43-201ENST00000238628 TOPAZ1Q8N9V7 1692 aa12.26□□□□□ -0.45
IFT43-201ENST00000238628 EXOC5O00471 708 aa12.25□□□□□ -0.45
IFT43-201ENST00000238628 GCP02774 474 aa12.25□□□□□ -0.45
IFT43-201ENST00000238628 HTRA3P83110 453 aa12.25□□□□□ -0.45
IFT43-201ENST00000238628 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
IFT43-201ENST00000238628 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
IFT43-201ENST00000238628 TULP4Q9NRJ4 1543 aa12.24□□□□□ -0.45
IFT43-201ENST00000238628 TFCP2L1Q9NZI6 479 aa12.24□□□□□ -0.45
IFT43-201ENST00000238628 KDM2AQ9Y2K7 1162 aa12.24□□□□□ -0.45
IFT43-201ENST00000238628 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
IFT43-201ENST00000238628 PNPLA7Q6ZV29 1317 aa12.23□□□□□ -0.45
IFT43-201ENST00000238628 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
IFT43-201ENST00000238628 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
IFT43-201ENST00000238628 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
IFT43-201ENST00000238628 DCAF11Q8TEB1 546 aa12.22□□□□□ -0.45
IFT43-201ENST00000238628 USP19O94966 1318 aa12.21□□□□□ -0.45
IFT43-201ENST00000238628 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.45
IFT43-201ENST00000238628 ADGRB1O14514 1584 aa12.21□□□□□ -0.46
IFT43-201ENST00000238628 WDR90Q96KV7 1748 aa12.2□□□□□ -0.46
IFT43-201ENST00000238628 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
IFT43-201ENST00000238628 ACEP12821 1306 aa12.19□□□□□ -0.46
IFT43-201ENST00000238628 KAT6BQ8WYB5 2073 aa12.19□□□□□ -0.46
IFT43-201ENST00000238628 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
IFT43-201ENST00000238628 COL24A1Q17RW2 1714 aa12.19□□□□□ -0.46
IFT43-201ENST00000238628 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 HSPA1AP0DMV8 641 aaKnown RBP12.18□□□□□ -0.46
IFT43-201ENST00000238628 HSPA1BP0DMV9 641 aaKnown RBP12.18□□□□□ -0.46
IFT43-201ENST00000238628 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 SLC27A3Q5K4L6 730 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
IFT43-201ENST00000238628 STAC3Q96MF2 364 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 USP6P35125 1406 aa12.18□□□□□ -0.46
IFT43-201ENST00000238628 RBM46Q8TBY0 533 aaKnown RBP12.17□□□□□ -0.46
IFT43-201ENST00000238628 CDK19Q9BWU1 502 aa12.17□□□□□ -0.46
IFT43-201ENST00000238628 CACNB1Q02641 598 aaPredicted RBP12.16□□□□□ -0.46
IFT43-201ENST00000238628 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
IFT43-201ENST00000238628 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
IFT43-201ENST00000238628 AXIN2Q9Y2T1 843 aa12.16□□□□□ -0.46
IFT43-201ENST00000238628 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
IFT43-201ENST00000238628 ARHGEF28Q8N1W1 1705 aaKnown RBP12.15□□□□□ -0.46
IFT43-201ENST00000238628 KCNQ4P56696 695 aa12.15□□□□□ -0.46
IFT43-201ENST00000238628 NMRK2Q9NPI5 230 aa12.15□□□□□ -0.46
IFT43-201ENST00000238628 POLR3AO14802 1390 aaPredicted RBP12.15□□□□□ -0.46
IFT43-201ENST00000238628 RAB3GAP2Q9H2M9 1393 aa12.15□□□□□ -0.46
IFT43-201ENST00000238628 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
IFT43-201ENST00000238628 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
IFT43-201ENST00000238628 FSTL1Q12841 308 aa12.14□□□□□ -0.47
IFT43-201ENST00000238628 CCDC61Q9Y6R9 512 aa12.14□□□□□ -0.47
IFT43-201ENST00000238628 PLEKHG3A1L390 1219 aa12.13□□□□□ -0.47
IFT43-201ENST00000238628 NLRP6P59044 892 aa12.13□□□□□ -0.47
IFT43-201ENST00000238628 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
IFT43-201ENST00000238628 BTAF1O14981 1849 aa12.13□□□□□ -0.47
IFT43-201ENST00000238628 IGSF1Q8N6C5 1336 aa12.12□□□□□ -0.47
IFT43-201ENST00000238628 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
IFT43-201ENST00000238628 FAM161AQ3B820 660 aa12.11□□□□□ -0.47
IFT43-201ENST00000238628 CCDC7Q96M83 1385 aa12.1□□□□□ -0.47
IFT43-201ENST00000238628 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
IFT43-201ENST00000238628 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
IFT43-201ENST00000238628 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
IFT43-201ENST00000238628 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
IFT43-201ENST00000238628 SYTL4Q96C24 671 aaPredicted RBP12.07□□□□□ -0.48
IFT43-201ENST00000238628 COL18A1P39060 1754 aa12.07□□□□□ -0.48
IFT43-201ENST00000238628 SOX12O15370 315 aa12.06□□□□□ -0.48
IFT43-201ENST00000238628 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
IFT43-201ENST00000238628 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
IFT43-201ENST00000238628 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
IFT43-201ENST00000238628 CPSF1Q10570 1443 aaKnown RBP12.05□□□□□ -0.48
IFT43-201ENST00000238628 TRPM1Q7Z4N2 1603 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms