RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CABP4P57796 275 aa13.71□□□□□ -0.22
LAMA4-201ENST00000230538 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.22
LAMA4-201ENST00000230538 AEBP2Q6ZN18 517 aaPredicted RBP13.7□□□□□ -0.22
LAMA4-201ENST00000230538 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 NACAP1Q9BZK3 213 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 DACH1Q9UI36 760 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 TXNDC2Q86VQ3 553 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 ARAP1Q96P48 1450 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 CCDC192P0DO97 292 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
LAMA4-201ENST00000230538 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
LAMA4-201ENST00000230538 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-201ENST00000230538 PPFIBP1Q86W92 1011 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 ME1P48163 572 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 STIM1Q13586 685 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 IL27Q8NEV9 243 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 ERBINQ96RT1 1412 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 K7ELQ4 463 aaPredicted RBP13.69□□□□□ -0.22
LAMA4-201ENST00000230538 ERLIN2O94905 339 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
LAMA4-201ENST00000230538 WDR33Q9C0J8 1336 aaKnown RBP13.68□□□□□ -0.22
LAMA4-201ENST00000230538 ERICH3Q5RHP9 1530 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 NBPF8Q3BBV2 869 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
LAMA4-201ENST00000230538 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 SRCIN1Q9C0H9 1055 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 DHX8Q14562 1220 aaKnown RBP13.68□□□□□ -0.22
LAMA4-201ENST00000230538 BACH2Q9BYV9 841 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 ZHX3Q9H4I2 956 aa13.68□□□□□ -0.22
LAMA4-201ENST00000230538 MYL6BP14649 208 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 ZSCAN25Q6NSZ9 544 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 LEKR1Q6ZMV7 388 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 AFAP1Q8N556 730 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 TANGO6Q9C0B7 1094 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 HMGN5P82970 282 aaKnown RBP13.67□□□□□ -0.22
LAMA4-201ENST00000230538 MPNDQ8N594 471 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 LUC7LQ9NQ29 371 aaKnown RBP13.67□□□□□ -0.22
LAMA4-201ENST00000230538 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
LAMA4-201ENST00000230538 KRT85P78386 507 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 MVPQ14764 893 aaKnown RBP13.66□□□□□ -0.22
LAMA4-201ENST00000230538 SOGA3Q5TF21 947 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 NEFHP12036 1026 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 CCDC181Q5TID7 509 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 CCDC57Q2TAC2 916 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 LARP1BQ659C4 914 aaKnown RBP13.66□□□□□ -0.22
LAMA4-201ENST00000230538 ZNF530Q6P9A1 599 aaPredicted RBP13.66□□□□□ -0.22
LAMA4-201ENST00000230538 TSPYL1Q9H0U9 437 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 WDR63Q8IWG1 891 aa13.66□□□□□ -0.22
LAMA4-201ENST00000230538 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
LAMA4-201ENST00000230538 NOL7Q9UMY1 257 aaKnown RBP13.66□□□□□ -0.22
LAMA4-201ENST00000230538 AACSQ86V21 672 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
LAMA4-201ENST00000230538 GOLGA6L10A6NI86 522 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
LAMA4-201ENST00000230538 TOM1L2Q6ZVM7 507 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.22
LAMA4-201ENST00000230538 CCDC184Q52MB2 194 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 MPHOSPH8Q99549 860 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 CABP1Q9NZU7 370 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
LAMA4-201ENST00000230538 CBFA2T2O43439 604 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 TXLNBQ8N3L3 684 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 GRPEL1Q9HAV7 217 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
LAMA4-201ENST00000230538 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 PDRG1Q9NUG6 133 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 CDKL5O76039 1030 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 BLOC1S2Q6QNY1 142 aa13.64□□□□□ -0.23
LAMA4-201ENST00000230538 ZRSR2Q15696 482 aaKnown RBP13.63□□□□□ -0.23
LAMA4-201ENST00000230538 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
LAMA4-201ENST00000230538 SEPT7Q16181 437 aaKnown RBP13.63□□□□□ -0.23
LAMA4-201ENST00000230538 SPATA32Q96LK8 384 aa13.63□□□□□ -0.23
LAMA4-201ENST00000230538 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-201ENST00000230538 JAKMIP1Q96N16 626 aaKnown RBP13.62□□□□□ -0.23
LAMA4-201ENST00000230538 CWC27Q6UX04 472 aaKnown RBP13.62□□□□□ -0.23
LAMA4-201ENST00000230538 BTBD11A6QL63 1104 aa13.62□□□□□ -0.23
LAMA4-201ENST00000230538 SRGAP3O43295 1099 aa13.62□□□□□ -0.23
LAMA4-201ENST00000230538 TDO2P48775 406 aa13.62□□□□□ -0.23
LAMA4-201ENST00000230538 FAM177A1Q8N128 213 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-201ENST00000230538 RTEL1-TNFRSF6BF6WH68 1400 aa13.62□□□□□ -0.23
LAMA4-201ENST00000230538 CCDC112Q8NEF3 446 aa13.62□□□□□ -0.23
LAMA4-201ENST00000230538 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
LAMA4-201ENST00000230538 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 CTNNA3Q9UI47 895 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
LAMA4-201ENST00000230538 ANKRD62A6NC57 917 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms