RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
RFX4-201ENST00000229387 OS9Q13438 667 aaPredicted RBP7□□□□□ -1.29
RFX4-201ENST00000229387 ADAMTS8Q9UP79 889 aa7□□□□□ -1.29
RFX4-201ENST00000229387 A2MP01023 1474 aa7□□□□□ -1.29
RFX4-201ENST00000229387 MLECQ14165 292 aa7□□□□□ -1.29
RFX4-201ENST00000229387 NBPF10Q6P3W6 841 aaKnown RBP7□□□□□ -1.29
RFX4-201ENST00000229387 PRAG1Q86YV5 1406 aa7□□□□□ -1.29
RFX4-201ENST00000229387 NOP2P46087 812 aaKnown RBP7□□□□□ -1.29
RFX4-201ENST00000229387 RRP1P56182 461 aaKnown RBP7□□□□□ -1.29
RFX4-201ENST00000229387 HMGN5P82970 282 aaKnown RBP7□□□□□ -1.29
RFX4-201ENST00000229387 SEMA3FQ13275 785 aa7□□□□□ -1.29
RFX4-201ENST00000229387 CT47A1Q5JQC4 288 aaPredicted RBP7□□□□□ -1.29
RFX4-201ENST00000229387 KTN1Q86UP2 1357 aaKnown RBP7□□□□□ -1.29
RFX4-201ENST00000229387 KIF16BQ96L93 1317 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 PLCH2O75038 1416 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 DDX11L8A8MPP1 907 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 KIF1CO43896 1103 aaKnown RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 MLLT3P42568 568 aaPredicted RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 NLRP13Q86W25 1043 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 ARHGEF1Q92888 912 aaKnown RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 RBM28Q9NW13 759 aaKnown RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 OGFRQ9NZT2 677 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 FEZ2Q9UHY8 353 aaPredicted RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 SLFN14P0C7P3 912 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 OSCARQ8IYS5 282 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 PRDM16Q9HAZ2 1276 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 HSP90AB1P08238 724 aaKnown RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 ANAPC15P60006 121 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 E2F4Q16254 413 aa6.99□□□□□ -1.29
RFX4-201ENST00000229387 SPINK5Q9NQ38 1064 aaPredicted RBP6.99□□□□□ -1.29
RFX4-201ENST00000229387 RALGAPBQ86X10 1494 aa6.98□□□□□ -1.29
RFX4-201ENST00000229387 DONSONQ9NYP3 566 aa6.98□□□□□ -1.29
RFX4-201ENST00000229387 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.98□□□□□ -1.29
RFX4-201ENST00000229387 ABCC2Q92887 1545 aa6.98□□□□□ -1.29
RFX4-201ENST00000229387 CDC42BPBQ9Y5S2 1711 aa6.98□□□□□ -1.29
RFX4-201ENST00000229387 GOLIM4O00461 696 aa6.98□□□□□ -1.29
RFX4-201ENST00000229387 ZKSCAN8Q15776 578 aaPredicted RBP6.98□□□□□ -1.29
RFX4-201ENST00000229387 RRP7AQ9Y3A4 280 aaKnown RBP6.97□□□□□ -1.29
RFX4-201ENST00000229387 SHANK2Q9UPX8 1470 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 GTF2A1P52655 376 aaPredicted RBP6.97□□□□□ -1.29
RFX4-201ENST00000229387 SKOR2Q2VWA4 1001 aaPredicted RBP6.97□□□□□ -1.29
RFX4-201ENST00000229387 DCAF8Q5TAQ9 597 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 C20orf194Q5TEA3 1177 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.97□□□□□ -1.29
RFX4-201ENST00000229387 OTUD6BQ8N6M0 293 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 RCAN3Q9UKA8 241 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 ZKSCAN5Q9Y2L8 839 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 UGGT1Q9NYU2 1555 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 KDM5CP41229 1560 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 WDR43Q15061 677 aaKnown RBP eCLIP6.97□□□□□ -1.29
RFX4-201ENST00000229387 CCDC97Q96F63 343 aaPredicted RBP6.97□□□□□ -1.29
RFX4-201ENST00000229387 PDLIM2Q96JY6 352 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 SLC12A5Q9H2X9 1139 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 KDM2BQ8NHM5 1336 aa6.97□□□□□ -1.29
RFX4-201ENST00000229387 UHRF1BP1Q6BDS2 1440 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 ERBINQ96RT1 1412 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 ADCY10Q96PN6 1610 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 EP400NLQ6ZTU2 488 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.96□□□□□ -1.29
RFX4-201ENST00000229387 RNF217Q8TC41 542 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 SLC26A8Q96RN1 970 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 TERF2IPQ9NYB0 399 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 FANCAO15360 1455 aa6.96□□□□□ -1.29
RFX4-201ENST00000229387 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
RFX4-201ENST00000229387 GUCY2CP25092 1073 aa6.96□□□□□ -1.3
RFX4-201ENST00000229387 SSR1P43307 286 aaKnown RBP6.96□□□□□ -1.3
RFX4-201ENST00000229387 MNS1Q8NEH6 495 aa6.96□□□□□ -1.3
RFX4-201ENST00000229387 STAG3Q9UJ98 1225 aa6.96□□□□□ -1.3
RFX4-201ENST00000229387 ADGBQ8N7X0 1667 aa6.96□□□□□ -1.3
RFX4-201ENST00000229387 ICE2Q659A1 982 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 USP19O94966 1318 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 ASXL2Q76L83 1435 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 PPP2R1AP30153 589 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 MCM6Q14566 821 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 NBPF6Q5VWK0 638 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 NBPF5PQ86XG9 351 aaPredicted RBP6.95□□□□□ -1.3
RFX4-201ENST00000229387 ANKRD7Q92527 254 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 ZBTB9Q96C00 473 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 NBPF4Q96M43 638 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 MED4Q9NPJ6 270 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 APAF1O14727 1248 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
RFX4-201ENST00000229387 XPCQ01831 940 aaPredicted RBP6.95□□□□□ -1.3
RFX4-201ENST00000229387 FLIIQ13045 1269 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 GAS2L3Q86XJ1 694 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 GPIHBP1Q8IV16 184 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 PDCL2Q8N4E4 241 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 ADGRL1O94910 1474 aa6.95□□□□□ -1.3
RFX4-201ENST00000229387 CROCC2H7BZ55 1655 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 DHX16O60231 1041 aaKnown RBP6.94□□□□□ -1.3
RFX4-201ENST00000229387 TERF2Q15554 542 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
RFX4-201ENST00000229387 CARD14Q9BXL6 1004 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 KANK1Q14678 1352 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 PREX2Q70Z35 1606 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 PPP1R37O75864 691 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 FBLN1P23142 703 aa6.94□□□□□ -1.3
RFX4-201ENST00000229387 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
RFX4-201ENST00000229387 CASC1Q6TDU7 716 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms