RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 CTAGE5O15320 804 aa6.23□□□□□ -1.41
KRR1-201ENST00000229214 KINO60870 393 aaKnown RBP6.23□□□□□ -1.41
KRR1-201ENST00000229214 TTC14Q96N46 770 aa6.23□□□□□ -1.41
KRR1-201ENST00000229214 CCDC178Q5BJE1 867 aa6.23□□□□□ -1.41
KRR1-201ENST00000229214 CCDC39Q9UFE4 941 aa6.23□□□□□ -1.41
KRR1-201ENST00000229214 CEP131Q9UPN4 1083 aa6.23□□□□□ -1.41
KRR1-201ENST00000229214 SEPT7Q16181 437 aaKnown RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 DNAJC21Q5F1R6 531 aaKnown RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 STK24Q9Y6E0 443 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 CLSTN1O94985 981 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 APBB1IPQ7Z5R6 666 aaPredicted RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 DDX10Q13206 875 aaKnown RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 TMOD4Q9NZQ9 345 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 COG6Q9Y2V7 657 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 MYO7AQ13402 2215 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 ZNF397Q8NF99 534 aaPredicted RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 CTNNA3Q9UI47 895 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 ZNF189O75820 626 aaPredicted RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 HSP90AB2PQ58FF8 381 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 RCAN3Q9UKA8 241 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 GCOM1H8Y6P7 765 aaPredicted RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 SLU7O95391 586 aaKnown RBP6.22□□□□□ -1.41
KRR1-201ENST00000229214 MYZAPP0CAP1 466 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 MRE11P49959 708 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 C6orf163Q5TEZ5 329 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 TRIM22Q8IYM9 498 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 NCAPGQ9BPX3 1015 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 NACAP1Q9BZK3 213 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 SH2D4BQ5SQS7 431 aa6.22□□□□□ -1.41
KRR1-201ENST00000229214 EDEM3Q9BZQ6 932 aa6.21□□□□□ -1.41
KRR1-201ENST00000229214 GNAI1P63096 354 aa6.21□□□□□ -1.41
KRR1-201ENST00000229214 BAZ2BQ9UIF8 2168 aaKnown RBP6.21□□□□□ -1.41
KRR1-201ENST00000229214 NBR1Q14596 966 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 SEC62Q99442 399 aaKnown RBP6.21□□□□□ -1.42
KRR1-201ENST00000229214 PDE6BP35913 854 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 CCDC6Q16204 474 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 GPRASP1Q5JY77 1395 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 HMGXB3Q12766 1538 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 MAP7Q14244 749 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 TCHPQ9BT92 498 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 SLC52A1Q9NWF4 448 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 GTF2E1P29083 439 aaPredicted RBP6.21□□□□□ -1.42
KRR1-201ENST00000229214 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.21□□□□□ -1.423e-7■□□□□ 10.8
KRR1-201ENST00000229214 EIF4G1Q04637 1599 aaKnown RBP6.21□□□□□ -1.42
KRR1-201ENST00000229214 PLCB2Q00722 1185 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 TNIP1Q15025 636 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 TTC5Q8N0Z6 440 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 CCDC12Q8WUD4 166 aaPredicted RBP6.21□□□□□ -1.42
KRR1-201ENST00000229214 TBC1D2BQ9UPU7 963 aa6.21□□□□□ -1.42
KRR1-201ENST00000229214 SPECC1LQ69YQ0 1117 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 PRM3Q9NNZ6 103 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 EIF2AK4Q9P2K8 1649 aaKnown RBP6.2□□□□□ -1.42
KRR1-201ENST00000229214 PPP2R5EQ16537 467 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 TICAM2Q86XR7 235 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 PIBF1Q8WXW3 757 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 NSD2O96028 1365 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 SHTN1A0MZ66 631 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 SNX16P57768 344 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 ATF7IPQ6VMQ6 1270 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 CCDC150Q8NCX0 1101 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 MRGBPQ9NV56 204 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 BCAP29Q9UHQ4 241 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 C1orf141Q5JVX7 400 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 SUDS3Q9H7L9 328 aaPredicted RBP6.2□□□□□ -1.42
KRR1-201ENST00000229214 EHMT1Q9H9B1 1298 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 ZKSCAN2Q63HK3 967 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 C22orf23Q9BZE7 217 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 EHBP1L1Q8N3D4 1523 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 RPGRIP1LQ68CZ1 1315 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 ZSCAN12O43309 604 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 GLT8D2Q9H1C3 349 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 POLE3Q9NRF9 147 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 GIMAP7Q8NHV1 300 aa6.2□□□□□ -1.42
KRR1-201ENST00000229214 ORC3Q9UBD5 711 aaPredicted RBP6.2□□□□□ -1.42
KRR1-201ENST00000229214 NAP1L1P55209 391 aaKnown RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 TUBB2AQ13885 445 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 TUBB2BQ9BVA1 445 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 SLKQ9H2G2 1235 aaPredicted RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 ZNF692Q9BU19 519 aaPredicted RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 BRD4O60885 1362 aaPredicted RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 TEFQ10587 303 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 SRRTQ9BXP5 876 aaKnown RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 ABCD1P33897 745 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 MAGEC2Q9UBF1 373 aaPredicted RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 SETD1BQ9UPS6 1966 aaKnown RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 PPFIA3O75145 1194 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 TNPO1Q92973 898 aaKnown RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 RAD50Q92878 1312 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 KIF5CO60282 957 aa6.19□□□□□ -1.42
KRR1-201ENST00000229214 SECISBP2LQ93073 1101 aaKnown RBP6.19□□□□□ -1.42
KRR1-201ENST00000229214 SYNJ2O15056 1496 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 FERMT2Q96AC1 680 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 CCDC27Q2M243 656 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 CCDC175P0C221 793 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 PDE3AQ14432 1141 aa6.18□□□□□ -1.42
KRR1-201ENST00000229214 SMC1AQ14683 1233 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms