RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TRIM37O94972 964 aa25.36■■□□□ 1.65
PFN1-201ENST00000225655 TMC1Q8TDI8 760 aa25.36■■□□□ 1.65
PFN1-201ENST00000225655 ABCC6O95255 1503 aa25.36■■□□□ 1.65
PFN1-201ENST00000225655 WDR17Q8IZU2 1322 aa25.36■■□□□ 1.65
PFN1-201ENST00000225655 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
PFN1-201ENST00000225655 SOX12O15370 315 aa25.34■■□□□ 1.65
PFN1-201ENST00000225655 HDGFL2Q7Z4V5 671 aaPredicted RBP25.34■■□□□ 1.65
PFN1-201ENST00000225655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.34■■□□□ 1.65
PFN1-201ENST00000225655 SLC12A5Q9H2X9 1139 aa25.34■■□□□ 1.65
PFN1-201ENST00000225655 WNK3Q9BYP7 1800 aa25.34■■□□□ 1.65
PFN1-201ENST00000225655 SRCAPQ6ZRS2 3230 aa25.34■■□□□ 1.65
PFN1-201ENST00000225655 TESK2Q96S53 571 aa25.33■■□□□ 1.65
PFN1-201ENST00000225655 LRRC37A3O60309 1634 aa25.33■■□□□ 1.65
PFN1-201ENST00000225655 EDC4Q6P2E9 1401 aaKnown RBP25.32■■□□□ 1.64
PFN1-201ENST00000225655 TERF2IPQ9NYB0 399 aa25.32■■□□□ 1.64
PFN1-201ENST00000225655 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
PFN1-201ENST00000225655 SLC24A1O60721 1099 aa25.31■■□□□ 1.64
PFN1-201ENST00000225655 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
PFN1-201ENST00000225655 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
PFN1-201ENST00000225655 C11orf95C9JLR9 678 aaPredicted RBP25.3■■□□□ 1.64
PFN1-201ENST00000225655 NME9Q86XW9 330 aa25.3■■□□□ 1.64
PFN1-201ENST00000225655 CAMKK2Q96RR4 588 aa25.3■■□□□ 1.64
PFN1-201ENST00000225655 A0A1W2PP64 1363 aa25.3■■□□□ 1.64
PFN1-201ENST00000225655 NINLQ9Y2I6 1382 aa25.3■■□□□ 1.64
PFN1-201ENST00000225655 APBA3O96018 575 aa25.29■■□□□ 1.64
PFN1-201ENST00000225655 EZH2Q15910 746 aaKnown RBP25.29■■□□□ 1.64
PFN1-201ENST00000225655 LRP5O75197 1615 aa25.28■■□□□ 1.64
PFN1-201ENST00000225655 CDCA7Q9BWT1 371 aaPredicted RBP25.28■■□□□ 1.64
PFN1-201ENST00000225655 CARD10Q9BWT7 1032 aa25.28■■□□□ 1.64
PFN1-201ENST00000225655 OVOS2A0A0G2JMS6 1433 aa25.28■■□□□ 1.64
PFN1-201ENST00000225655 OVOS2A0A0J9YW53 1432 aa25.28■■□□□ 1.64
PFN1-201ENST00000225655 OVOS2Q6IE36 1432 aa25.28■■□□□ 1.64
PFN1-201ENST00000225655 LTN1O94822 1766 aa25.27■■□□□ 1.64
PFN1-201ENST00000225655 PSDA5PKW4 1024 aaPredicted RBP25.27■■□□□ 1.64
PFN1-201ENST00000225655 CSB-PGBD3P0DP91 1061 aa25.26■■□□□ 1.63
PFN1-201ENST00000225655 DDB1Q16531 1140 aa25.26■■□□□ 1.63
PFN1-201ENST00000225655 RREB1Q92766 1687 aa25.25■■□□□ 1.63
PFN1-201ENST00000225655 SBF2Q86WG5 1849 aa25.24■■□□□ 1.63
PFN1-201ENST00000225655 CCDC7Q96M83 1385 aa25.23■■□□□ 1.63
PFN1-201ENST00000225655 USP47Q96K76 1375 aa25.22■■□□□ 1.63
PFN1-201ENST00000225655 R3HDM1Q15032 1099 aaKnown RBP25.21■■□□□ 1.63
PFN1-201ENST00000225655 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.63
PFN1-201ENST00000225655 BCL9O00512 1426 aa25.2■■□□□ 1.62
PFN1-201ENST00000225655 ERBB3P21860 1342 aa25.19■■□□□ 1.62
PFN1-201ENST00000225655 RGPD3A6NKT7 1758 aaPredicted RBP25.18■■□□□ 1.62
PFN1-201ENST00000225655 RGPD4Q7Z3J3 1758 aa25.18■■□□□ 1.62
PFN1-201ENST00000225655 MARCH10Q8NA82 808 aaPredicted RBP25.18■■□□□ 1.62
PFN1-201ENST00000225655 TMF1P82094 1093 aa25.17■■□□□ 1.62
PFN1-201ENST00000225655 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
PFN1-201ENST00000225655 BCL11BQ9C0K0 894 aaPredicted RBP25.15■■□□□ 1.62
PFN1-201ENST00000225655 TNS2Q63HR2 1409 aa25.14■■□□□ 1.62
PFN1-201ENST00000225655 EXOC5O00471 708 aa25.14■■□□□ 1.62
PFN1-201ENST00000225655 NLRP2Q9NX02 1062 aa25.14■■□□□ 1.62
PFN1-201ENST00000225655 PLSCR1O15162 318 aa25.13■■□□□ 1.61
PFN1-201ENST00000225655 ANKRD24Q8TF21 1146 aa25.13■■□□□ 1.61
PFN1-201ENST00000225655 COG3Q96JB2 828 aa25.13■■□□□ 1.61
PFN1-201ENST00000225655 ZEB1P37275 1124 aaPredicted RBP25.12■■□□□ 1.61
PFN1-201ENST00000225655 NBPF14Q5TI25 921 aa25.12■■□□□ 1.61
PFN1-201ENST00000225655 FAM208AQ9UK61 1670 aaKnown RBP25.11■■□□□ 1.61
PFN1-201ENST00000225655 IP6K1Q92551 441 aa25.11■■□□□ 1.61
PFN1-201ENST00000225655 CDCA8Q53HL2 280 aa25.1■■□□□ 1.61
PFN1-201ENST00000225655 IL2RBP14784 551 aa25.09■■□□□ 1.61
PFN1-201ENST00000225655 PTF1AQ7RTS3 328 aa25.09■■□□□ 1.61
PFN1-201ENST00000225655 MAP3K19Q56UN5 1328 aa25.06■■□□□ 1.6
PFN1-201ENST00000225655 NHSQ6T4R5 1651 aa25.04■■□□□ 1.6
PFN1-201ENST00000225655 FYB1O15117 783 aa25.04■■□□□ 1.6
PFN1-201ENST00000225655 MYOM1P52179 1685 aa25.04■■□□□ 1.6
PFN1-201ENST00000225655 KIF20BQ96Q89 1820 aa25.03■■□□□ 1.6
PFN1-201ENST00000225655 HOXC9P31274 260 aa25.03■■□□□ 1.6
PFN1-201ENST00000225655 AMPHP49418 695 aa25.02■■□□□ 1.6
PFN1-201ENST00000225655 RTL1A6NKG5 1358 aa25.02■■□□□ 1.6
PFN1-201ENST00000225655 FBLN1P23142 703 aa25.01■■□□□ 1.59
PFN1-201ENST00000225655 LTV1Q96GA3 475 aaPredicted RBP25.01■■□□□ 1.59
PFN1-201ENST00000225655 GGNBP2Q9H3C7 697 aa25.01■■□□□ 1.59
PFN1-201ENST00000225655 PROM2Q8N271 834 aa25■■□□□ 1.59
PFN1-201ENST00000225655 KCNQ2O43526 872 aa24.99■■□□□ 1.59
PFN1-201ENST00000225655 RGPD2P0DJD1 1756 aa24.98■■□□□ 1.59
PFN1-201ENST00000225655 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
PFN1-201ENST00000225655 ANO8Q9HCE9 1232 aaPredicted RBP24.96■■□□□ 1.59
PFN1-201ENST00000225655 RRS1Q15050 365 aaKnown RBP24.95■■□□□ 1.58
PFN1-201ENST00000225655 ACSBG1Q96GR2 724 aa24.95■■□□□ 1.58
PFN1-201ENST00000225655 CARD14Q9BXL6 1004 aa24.95■■□□□ 1.58
PFN1-201ENST00000225655 BTAF1O14981 1849 aa24.94■■□□□ 1.58
PFN1-201ENST00000225655 CASZ1Q86V15 1759 aa24.93■■□□□ 1.58
PFN1-201ENST00000225655 EIF4G2P78344 907 aaKnown RBP eCLIP24.93■■□□□ 1.58
PFN1-201ENST00000225655 NSD3Q9BZ95 1437 aa24.93■■□□□ 1.58
PFN1-201ENST00000225655 KIF24Q5T7B8 1368 aa24.93■■□□□ 1.58
PFN1-201ENST00000225655 SPON1Q9HCB6 807 aa24.92■■□□□ 1.58
PFN1-201ENST00000225655 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
PFN1-201ENST00000225655 SMG6Q86US8 1419 aaKnown RBP24.91■■□□□ 1.58
PFN1-201ENST00000225655 SHANK3Q9BYB0 1731 aa24.9■■□□□ 1.58
PFN1-201ENST00000225655 DDX54Q8TDD1 881 aaKnown RBP24.9■■□□□ 1.58
PFN1-201ENST00000225655 MEGF6O75095 1541 aa24.9■■□□□ 1.58
PFN1-201ENST00000225655 INSRP06213 1382 aa24.9■■□□□ 1.58
PFN1-201ENST00000225655 FLT4P35916 1363 aa24.9■■□□□ 1.58
PFN1-201ENST00000225655 NBPF6Q5VWK0 638 aa24.88■■□□□ 1.57
PFN1-201ENST00000225655 NBPF4Q96M43 638 aa24.88■■□□□ 1.57
PFN1-201ENST00000225655 STK32BQ9NY57 414 aa24.88■■□□□ 1.57
PFN1-201ENST00000225655 CGNL1Q0VF96 1302 aa24.86■■□□□ 1.57
PFN1-201ENST00000225655 PAPPAQ13219 1627 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms