RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 HSP90AB2PQ58FF8 381 aa22.11■■□□□ 1.13
CHMP5-201ENST00000223500 KIAA0232Q92628 1395 aa22.1■■□□□ 1.13
CHMP5-201ENST00000223500 HSPA1LP34931 641 aa22.09■■□□□ 1.13
CHMP5-201ENST00000223500 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
CHMP5-201ENST00000223500 ABCC6O95255 1503 aa22.08■■□□□ 1.12
CHMP5-201ENST00000223500 U2SURPO15042 1029 aaKnown RBP22.08■■□□□ 1.12
CHMP5-201ENST00000223500 BLMP54132 1417 aaPredicted RBP22.07■■□□□ 1.12
CHMP5-201ENST00000223500 IL13P35225 146 aa22.07■■□□□ 1.12
CHMP5-201ENST00000223500 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
CHMP5-201ENST00000223500 U2AF1L5P0DN76 240 aaPredicted RBP22.06■■□□□ 1.12
CHMP5-201ENST00000223500 U2AF1Q01081 240 aaKnown RBP eCLIP22.06■■□□□ 1.12
CHMP5-201ENST00000223500 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
CHMP5-201ENST00000223500 COL18A1P39060 1754 aa22.05■■□□□ 1.12
CHMP5-201ENST00000223500 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
CHMP5-201ENST00000223500 RGPD5Q99666 1765 aa22.04■■□□□ 1.12
CHMP5-201ENST00000223500 SPATA31A6Q5VVP1 1343 aa22.03■■□□□ 1.12
CHMP5-201ENST00000223500 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
CHMP5-201ENST00000223500 NUTM2BA6NNL0 878 aaPredicted RBP22.03■■□□□ 1.12
CHMP5-201ENST00000223500 NUTM2EB1AL46 878 aaPredicted RBP22.03■■□□□ 1.12
CHMP5-201ENST00000223500 NUTM2AQ8IVF1 878 aaPredicted RBP22.03■■□□□ 1.12
CHMP5-201ENST00000223500 PNNQ9H307 717 aaKnown RBP22.03■■□□□ 1.12
CHMP5-201ENST00000223500 AXIN2Q9Y2T1 843 aa22.02■■□□□ 1.12
CHMP5-201ENST00000223500 ANKRD24Q8TF21 1146 aa22.01■■□□□ 1.11
CHMP5-201ENST00000223500 FAM83GA6ND36 823 aa22■■□□□ 1.11
CHMP5-201ENST00000223500 FBXO41Q8TF61 875 aa22■■□□□ 1.11
CHMP5-201ENST00000223500 COL14A1Q05707 1796 aaKnown RBP22■■□□□ 1.11
CHMP5-201ENST00000223500 ADAMTS2O95450 1211 aa21.99■■□□□ 1.11
CHMP5-201ENST00000223500 LMO7Q8WWI1 1683 aa21.98■■□□□ 1.11
CHMP5-201ENST00000223500 ERBB3P21860 1342 aa21.98■■□□□ 1.11
CHMP5-201ENST00000223500 FCHSD2O94868 740 aa21.97■■□□□ 1.11
CHMP5-201ENST00000223500 EYA1Q99502 592 aa21.97■■□□□ 1.11
CHMP5-201ENST00000223500 RGPD1P0DJD0 1748 aa21.97■■□□□ 1.11
CHMP5-201ENST00000223500 CSB-PGBD3P0DP91 1061 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 YTHDC1Q96MU7 727 aaKnown RBP21.96■■□□□ 1.11
CHMP5-201ENST00000223500 IGSF1Q8N6C5 1336 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
CHMP5-201ENST00000223500 CAMTA1Q9Y6Y1 1673 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 NEFMP07197 916 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 EVA1CP58658 441 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 SULT6B1Q6IMI4 303 aa21.96■■□□□ 1.11
CHMP5-201ENST00000223500 HMOX1P09601 288 aa21.95■■□□□ 1.1
CHMP5-201ENST00000223500 RUNDC1Q96C34 613 aa21.95■■□□□ 1.1
CHMP5-201ENST00000223500 BTG4Q9NY30 223 aa21.94■■□□□ 1.1
CHMP5-201ENST00000223500 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
CHMP5-201ENST00000223500 CCDC146Q8IYE0 955 aa21.93■■□□□ 1.1
CHMP5-201ENST00000223500 RSPH6AQ9H0K4 717 aa21.93■■□□□ 1.1
CHMP5-201ENST00000223500 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
CHMP5-201ENST00000223500 COL5A2P05997 1499 aaPredicted RBP21.92■■□□□ 1.1
CHMP5-201ENST00000223500 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHMP5-201ENST00000223500 NBPF6Q5VWK0 638 aa21.92■■□□□ 1.1
CHMP5-201ENST00000223500 NBPF4Q96M43 638 aa21.92■■□□□ 1.1
CHMP5-201ENST00000223500 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
CHMP5-201ENST00000223500 NLRP2Q9NX02 1062 aa21.91■■□□□ 1.1
CHMP5-201ENST00000223500 KDRP35968 1356 aa21.91■■□□□ 1.1
CHMP5-201ENST00000223500 PLCH1Q4KWH8 1693 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 PRKAR2BP31323 418 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 MEX3CQ5U5Q3 659 aaKnown RBP21.9■■□□□ 1.1
CHMP5-201ENST00000223500 STRN4Q9NRL3 753 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 TOM1L2Q6ZVM7 507 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 PLEKHF1Q96S99 279 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 NWD2Q9ULI1 1742 aa21.9■■□□□ 1.1
CHMP5-201ENST00000223500 NGLY1Q96IV0 654 aa21.89■■□□□ 1.09
CHMP5-201ENST00000223500 LRP6O75581 1613 aa21.88■■□□□ 1.09
CHMP5-201ENST00000223500 USHBP1Q8N6Y0 703 aa21.88■■□□□ 1.09
CHMP5-201ENST00000223500 C8orf37Q96NL8 207 aa21.88■■□□□ 1.09
CHMP5-201ENST00000223500 NCAPD2Q15021 1401 aa21.86■■□□□ 1.09
CHMP5-201ENST00000223500 APAF1O14727 1248 aa21.86■■□□□ 1.09
CHMP5-201ENST00000223500 NGEFQ8N5V2 710 aa21.86■■□□□ 1.09
CHMP5-201ENST00000223500 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
CHMP5-201ENST00000223500 SLIT2O94813 1529 aa21.85■■□□□ 1.09
CHMP5-201ENST00000223500 LARP1Q6PKG0 1096 aaKnown RBP21.85■■□□□ 1.09
CHMP5-201ENST00000223500 TCP11L2Q8N4U5 519 aa21.85■■□□□ 1.09
CHMP5-201ENST00000223500 CRB1P82279 1406 aa21.84■■□□□ 1.09
CHMP5-201ENST00000223500 NRAPQ86VF7 1730 aa21.83■■□□□ 1.09
CHMP5-201ENST00000223500 FNBP4Q8N3X1 1017 aaPredicted RBP21.83■■□□□ 1.08
CHMP5-201ENST00000223500 RAPGEF4Q8WZA2 1011 aa21.83■■□□□ 1.08
CHMP5-201ENST00000223500 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
CHMP5-201ENST00000223500 UNC5CLQ8IV45 518 aa21.82■■□□□ 1.08
CHMP5-201ENST00000223500 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
CHMP5-201ENST00000223500 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
CHMP5-201ENST00000223500 TATP17735 454 aaPredicted RBP21.81■■□□□ 1.08
CHMP5-201ENST00000223500 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
CHMP5-201ENST00000223500 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
CHMP5-201ENST00000223500 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
CHMP5-201ENST00000223500 SALL2Q9Y467 1007 aaPredicted RBP21.8■■□□□ 1.08
CHMP5-201ENST00000223500 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
CHMP5-201ENST00000223500 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
CHMP5-201ENST00000223500 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
CHMP5-201ENST00000223500 PLEKHG2Q9H7P9 1386 aa21.79■■□□□ 1.08
CHMP5-201ENST00000223500 AMOTQ4VCS5 1084 aa21.78■■□□□ 1.08
CHMP5-201ENST00000223500 USP21Q9UK80 565 aa21.78■■□□□ 1.08
CHMP5-201ENST00000223500 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
CHMP5-201ENST00000223500 RIPK4P57078 832 aa21.77■■□□□ 1.08
CHMP5-201ENST00000223500 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.77■■□□□ 1.08
CHMP5-201ENST00000223500 USP35Q9P2H5 1018 aa21.77■■□□□ 1.07
CHMP5-201ENST00000223500 CCDC9Q9Y3X0 531 aaKnown RBP21.77■■□□□ 1.07
CHMP5-201ENST00000223500 AFF2P51816 1311 aa21.76■■□□□ 1.07
CHMP5-201ENST00000223500 BCL9LQ86UU0 1499 aa21.76■■□□□ 1.07
CHMP5-201ENST00000223500 IL2RBP14784 551 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms