RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 PPM1GO15355 546 aaPredicted RBP26.36■■□□□ 1.81
SNAPC2-201ENST00000221573 PPP2R1AP30153 589 aa26.36■■□□□ 1.81
SNAPC2-201ENST00000221573 AMPHP49418 695 aa26.36■■□□□ 1.81
SNAPC2-201ENST00000221573 RTL1A6NKG5 1358 aa26.36■■□□□ 1.81
SNAPC2-201ENST00000221573 NGLY1Q96IV0 654 aa26.35■■□□□ 1.81
SNAPC2-201ENST00000221573 AXIN2Q9Y2T1 843 aa26.35■■□□□ 1.81
SNAPC2-201ENST00000221573 HOXC9P31274 260 aa26.34■■□□□ 1.81
SNAPC2-201ENST00000221573 DIEXFQ68CQ4 756 aaKnown RBP26.34■■□□□ 1.81
SNAPC2-201ENST00000221573 FLT4P35916 1363 aa26.34■■□□□ 1.81
SNAPC2-201ENST00000221573 BTG4Q9NY30 223 aa26.34■■□□□ 1.81
SNAPC2-201ENST00000221573 CDK12Q9NYV4 1490 aaPredicted RBP26.34■■□□□ 1.81
SNAPC2-201ENST00000221573 KIF24Q5T7B8 1368 aa26.33■■□□□ 1.81
SNAPC2-201ENST00000221573 ANP32CO43423 234 aa26.33■■□□□ 1.81
SNAPC2-201ENST00000221573 MTHFSP49914 203 aa26.33■■□□□ 1.81
SNAPC2-201ENST00000221573 IP6K1Q92551 441 aa26.33■■□□□ 1.81
SNAPC2-201ENST00000221573 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.33■■□□□ 1.8
SNAPC2-201ENST00000221573 AFF2P51816 1311 aa26.32■■□□□ 1.8
SNAPC2-201ENST00000221573 COL5A2P05997 1499 aaPredicted RBP26.31■■□□□ 1.8
SNAPC2-201ENST00000221573 BLMP54132 1417 aaPredicted RBP26.31■■□□□ 1.8
SNAPC2-201ENST00000221573 HSP90AB2PQ58FF8 381 aa26.3■■□□□ 1.8
SNAPC2-201ENST00000221573 FNBP4Q8N3X1 1017 aaPredicted RBP26.3■■□□□ 1.8
SNAPC2-201ENST00000221573 MYBBP1AQ9BQG0 1328 aaKnown RBP26.3■■□□□ 1.8
SNAPC2-201ENST00000221573 BCL9LQ86UU0 1499 aa26.3■■□□□ 1.8
SNAPC2-201ENST00000221573 RGPD2P0DJD1 1756 aa26.3■■□□□ 1.8
SNAPC2-201ENST00000221573 INSRP06213 1382 aa26.28■■□□□ 1.8
SNAPC2-201ENST00000221573 FAM208AQ9UK61 1670 aaKnown RBP26.26■■□□□ 1.8
SNAPC2-201ENST00000221573 COL3A1P02461 1466 aaPredicted RBP26.26■■□□□ 1.79
SNAPC2-201ENST00000221573 LTV1Q96GA3 475 aaPredicted RBP26.26■■□□□ 1.79
SNAPC2-201ENST00000221573 STRN4Q9NRL3 753 aa26.26■■□□□ 1.79
SNAPC2-201ENST00000221573 USP21Q9UK80 565 aa26.26■■□□□ 1.79
SNAPC2-201ENST00000221573 ANKRD24Q8TF21 1146 aa26.25■■□□□ 1.79
SNAPC2-201ENST00000221573 ERBB3P21860 1342 aa26.25■■□□□ 1.79
SNAPC2-201ENST00000221573 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
SNAPC2-201ENST00000221573 EVA1CP58658 441 aa26.22■■□□□ 1.79
SNAPC2-201ENST00000221573 WDR17Q8IZU2 1322 aa26.21■■□□□ 1.79
SNAPC2-201ENST00000221573 EIF4A2Q14240 407 aaKnown RBP26.21■■□□□ 1.79
SNAPC2-201ENST00000221573 LARP1Q6PKG0 1096 aaKnown RBP26.21■■□□□ 1.79
SNAPC2-201ENST00000221573 CSB-PGBD3P0DP91 1061 aa26.2■■□□□ 1.79
SNAPC2-201ENST00000221573 RGPD1P0DJD0 1748 aa26.19■■□□□ 1.78
SNAPC2-201ENST00000221573 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
SNAPC2-201ENST00000221573 RGS17Q9UGC6 210 aaPredicted RBP26.19■■□□□ 1.78
SNAPC2-201ENST00000221573 ATRNO75882 1429 aa26.18■■□□□ 1.78
SNAPC2-201ENST00000221573 CFAP53Q96M91 514 aa26.18■■□□□ 1.78
SNAPC2-201ENST00000221573 CRB1P82279 1406 aa26.17■■□□□ 1.78
SNAPC2-201ENST00000221573 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
SNAPC2-201ENST00000221573 WNK3Q9BYP7 1800 aa26.16■■□□□ 1.78
SNAPC2-201ENST00000221573 DIAPH1O60610 1272 aaKnown RBP26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 GLI3P10071 1580 aa26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 IL13P35225 146 aa26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 VPS72Q15906 364 aa26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 CCDC184Q52MB2 194 aa26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 ZNF772Q68DY9 489 aaPredicted RBP26.15■■□□□ 1.78
SNAPC2-201ENST00000221573 NLRP2Q9NX02 1062 aa26.14■■□□□ 1.78
SNAPC2-201ENST00000221573 CCDC9Q9Y3X0 531 aaKnown RBP26.14■■□□□ 1.78
SNAPC2-201ENST00000221573 NBPF6Q5VWK0 638 aa26.14■■□□□ 1.77
SNAPC2-201ENST00000221573 NBPF4Q96M43 638 aa26.14■■□□□ 1.77
SNAPC2-201ENST00000221573 TRPC5Q9UL62 973 aaPredicted RBP26.14■■□□□ 1.77
SNAPC2-201ENST00000221573 SPATA31A5Q5VU36 1347 aa26.13■■□□□ 1.77
SNAPC2-201ENST00000221573 SPATA31A7Q8IWB4 1347 aa26.13■■□□□ 1.77
SNAPC2-201ENST00000221573 QTRT2Q9H974 415 aaKnown RBP26.13■■□□□ 1.77
SNAPC2-201ENST00000221573 USP35Q9P2H5 1018 aa26.13■■□□□ 1.77
SNAPC2-201ENST00000221573 SPATA31A1Q5TZJ5 1347 aa26.12■■□□□ 1.77
SNAPC2-201ENST00000221573 USHBP1Q8N6Y0 703 aa26.12■■□□□ 1.77
SNAPC2-201ENST00000221573 EYA1Q99502 592 aa26.12■■□□□ 1.77
SNAPC2-201ENST00000221573 MIER1Q8N108 512 aa26.11■■□□□ 1.77
SNAPC2-201ENST00000221573 CARD10Q9BWT7 1032 aa26.1■■□□□ 1.77
SNAPC2-201ENST00000221573 NCAPD2Q15021 1401 aa26.09■■□□□ 1.77
SNAPC2-201ENST00000221573 IGSF1Q8N6C5 1336 aa26.09■■□□□ 1.77
SNAPC2-201ENST00000221573 POTEAQ6S8J7 498 aa26.09■■□□□ 1.77
SNAPC2-201ENST00000221573 GJD4Q96KN9 370 aaPredicted RBP26.09■■□□□ 1.77
SNAPC2-201ENST00000221573 U2SURPO15042 1029 aaKnown RBP26.08■■□□□ 1.77
SNAPC2-201ENST00000221573 MRS2Q9HD23 443 aa26.06■■□□□ 1.76
SNAPC2-201ENST00000221573 TCP11L2Q8N4U5 519 aa26.05■■□□□ 1.76
SNAPC2-201ENST00000221573 AEBP1Q8IUX7 1158 aa26.04■■□□□ 1.76
SNAPC2-201ENST00000221573 NUDCQ9Y266 331 aa26.04■■□□□ 1.76
SNAPC2-201ENST00000221573 PARP4Q9UKK3 1724 aaKnown RBP26.04■■□□□ 1.76
SNAPC2-201ENST00000221573 THSD7AQ9UPZ6 1657 aa26.04■■□□□ 1.76
SNAPC2-201ENST00000221573 HMOX1P09601 288 aa26.03■■□□□ 1.76
SNAPC2-201ENST00000221573 SULT6B1Q6IMI4 303 aa26.03■■□□□ 1.76
SNAPC2-201ENST00000221573 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
SNAPC2-201ENST00000221573 MEGF6O75095 1541 aa26.02■■□□□ 1.76
SNAPC2-201ENST00000221573 FAM98CQ17RN3 349 aaKnown RBP26.02■■□□□ 1.76
SNAPC2-201ENST00000221573 THRAP3Q9Y2W1 955 aaKnown RBP26.02■■□□□ 1.76
SNAPC2-201ENST00000221573 KDRP35968 1356 aa26.02■■□□□ 1.76
SNAPC2-201ENST00000221573 U2AF1L5P0DN76 240 aaPredicted RBP26.01■■□□□ 1.75
SNAPC2-201ENST00000221573 RBM6P78332 1123 aaKnown RBP26.01■■□□□ 1.75
SNAPC2-201ENST00000221573 U2AF1Q01081 240 aaKnown RBP eCLIP26.01■■□□□ 1.75
SNAPC2-201ENST00000221573 LRRC37A3O60309 1634 aa26■■□□□ 1.75
SNAPC2-201ENST00000221573 BARGINQ6ZT62 677 aa26■■□□□ 1.75
SNAPC2-201ENST00000221573 CCER2I3L3R5 266 aa25.98■■□□□ 1.75
SNAPC2-201ENST00000221573 RXRBP28702 533 aa25.98■■□□□ 1.75
SNAPC2-201ENST00000221573 IL2RBP14784 551 aa25.98■■□□□ 1.75
SNAPC2-201ENST00000221573 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
SNAPC2-201ENST00000221573 BRWD3Q6RI45 1802 aa25.97■■□□□ 1.75
SNAPC2-201ENST00000221573 WDR43Q15061 677 aaKnown RBP eCLIP25.97■■□□□ 1.75
SNAPC2-201ENST00000221573 PKD1L3Q7Z443 1732 aa25.97■■□□□ 1.75
SNAPC2-201ENST00000221573 RAPGEF4Q8WZA2 1011 aa25.96■■□□□ 1.75
SNAPC2-201ENST00000221573 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
SNAPC2-201ENST00000221573 RSPH6AQ9H0K4 717 aa25.95■■□□□ 1.74
SNAPC2-201ENST00000221573 A0A0G2JS52 829 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms